BDGP Sequence Production Resources |
Search the DGRC for IP01307
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 13 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | HLH4C-RA |
Protein status: | IP01307.pep: gold |
Preliminary Size: | 1424 |
Sequenced Size: | 1456 |
Gene | Date | Evidence |
---|---|---|
CG3052 | 2005-01-01 | Successful iPCR screen |
HLH4C | 2008-04-29 | Release 5.5 accounting |
HLH4C | 2008-08-15 | Release 5.9 accounting |
HLH4C | 2008-12-18 | 5.12 accounting |
1456 bp (1456 high quality bases) assembled on 2005-08-25
GenBank Submission: BT022167
> IP01307.complete ACCGACTCTAGTGGCAAGCAAGGATATCTGCCAGACAACTCAAGGATCTA GAATAACTCTGCACCTGTGATAACTGCTCATTCAGCAGCAGGCTGGGCAG CGCAAGAAAGTCCAGTGTCCAGCGCTGGACACTGGACTTTCTTGCACCAC TGATTTCGGTACCGAAATCAGTGGTGCAAATAGCCAGAGAATGGTCTACG ATATGAGCCATATGGCGGCGGGTCCGCCGCAAAGCATTTCGCTTAGTCGC TACTATCTGGTCGACGATGATGAGATGATTGGGCCAAATAATCCGCATCT GGTCAACGAGGACTATGCGGCCAGTACGACGCTGGATATCGATAAGCGTT TTCAGGCGCGAATGGCGTGCGAAACGGCCGCACAACCGGCACCGCCACCG CCGCCCACGCCGGCGCCACGTCGCCGGACCACGCCCATTGCCCATTTGGA TCCATCGGAATTGGTGGGTCTATCGCGGGAGGAGCGGCGTCGTCGCAGGC GAGCGACACTCAAATACCGAACGGCACATGCGACGCGGGAGCGTATACGG GTGGAGGCATTCAATGTTTCCTTTGCCGAGCTGCGCAAGCTGTTGCCCAC ATTGCCGCCGGACAAGAAGCTTTCCAAGATCGAGATCCTCAAGCTGGCCA TCTGCTACATTGCCTATTTGAATCATGTGCTGGAGACGCCCTGAGATAGC GCCGGCGCCTCCAGTTTCGCCACCAGCTGCCTCTTTAACGAGGCCAATTT TTTCGCCCCCCCGTAGGAGGTGGGGGGGCGTGGCGGGCGGATTTAGGGGG AAAACATTGCGAATATTCCACATCCGATAAACGCATTTCACCATGCTCTG TAATCCGCACATCGCTCCATTGGATACTTTGCCGGTGGCGGCTATGGATA ATGCGATTATCGAATTAGCCATCTCACCAACTTAACCGAAGTGTTCGATG GATTTTGCCGATTTGCTAACCTATTTAACCTATGGTTAAATACATACATT TTTTTGTTTTTTGTTTTTTTTTTTCCTTGCCACTGTTGAAAGACAAATGC CCGTCGTTTCGTTTCGATTCGTTTTTTTTTTTAGGCTTAGGTTTGTTTTC GTAGAAACAATTGTAAAGCCACGATTTAACCTAAGGTTAAAATATGCCCG TACTAAATGTAGAAGATATAAGCTATTAGTTTGTGTAATTTAATTGAAAA GTAGAAATATCGAAGGAAATAACAAAACTAAATATGCCAGTAGTACATAC AATTAAATTTATGGGAAAGCAGTGCTTAATCCTCGGAGTAAACCTTGATC ATGGTTTATATAATATAAATAACCAAGAAAAAAAAAACAGAACCTTAAAC TAAGATCCATTTTTTGTCTAGCCTTTAAGTCGTGATATTTGTTTATACTC AAACGATTAATATATACAGCATTGTAATCGCAATAAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 4537897..4539170 | 1434..161 | 6250 | 99.4 | Minus |
chrX | 22417052 | chrX | 4540099..4540176 | 78..1 | 390 | 100 | Minus |
chrX | 22417052 | chrX | 2574758..2574827 | 639..570 | 230 | 88.6 | Minus |
chrX | 22417052 | chrX | 4539171..4539215 | 123..79 | 225 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 4645118..4646397 | 1440..161 | 6400 | 100 | Minus |
X | 23542271 | X | 4647307..4647384 | 78..1 | 390 | 100 | Minus |
X | 23542271 | X | 2680942..2681011 | 639..570 | 230 | 88.6 | Minus |
X | 23542271 | X | 4646398..4646442 | 123..79 | 225 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 4653216..4654495 | 1440..161 | 6400 | 100 | Minus |
X | 23527363 | X | 4655405..4655482 | 78..1 | 390 | 100 | Minus |
X | 23527363 | X | 2689040..2689109 | 639..570 | 230 | 88.5 | Minus |
X | 23527363 | X | 4654496..4654540 | 123..79 | 225 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 608..659 | 969..1019 | 131 | 75 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 4537897..4539170 | 161..1434 | 99 | == | Minus |
chrX | 4539171..4539215 | 79..123 | 100 | <- | Minus |
chrX | 4540099..4540176 | 1..78 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RA | 1..504 | 191..694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RA | 1..504 | 191..694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RB | 1..576 | 191..766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RA | 1..504 | 191..694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RB | 1..576 | 191..766 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RA | 31..153 | 1..123 | 100 | == | Plus |
HLH4C-RA | 154..1424 | 161..1431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RA | 31..153 | 1..123 | 100 | == | Plus |
HLH4C-RA | 154..1424 | 161..1431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RA | 31..153 | 1..123 | 100 | == | Plus |
HLH4C-RA | 154..1424 | 161..1431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RA | 31..153 | 1..123 | 100 | == | Plus |
HLH4C-RA | 154..1424 | 161..1431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLH4C-RA | 31..153 | 1..123 | 100 | == | Plus |
HLH4C-RA | 154..1424 | 161..1431 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4645124..4646397 | 161..1434 | 100 | == | Minus |
X | 4646398..4646442 | 79..123 | 100 | <- | Minus |
X | 4647307..4647384 | 1..78 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4645124..4646397 | 161..1434 | 100 | == | Minus |
X | 4646398..4646442 | 79..123 | 100 | <- | Minus |
X | 4647307..4647384 | 1..78 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4645124..4646397 | 161..1434 | 100 | == | Minus |
X | 4646398..4646442 | 79..123 | 100 | <- | Minus |
X | 4647307..4647384 | 1..78 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 4539157..4540430 | 161..1434 | 100 | == | Minus |
arm_X | 4540431..4540475 | 79..123 | 100 | <- | Minus |
arm_X | 4541340..4541417 | 1..78 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 4653222..4654495 | 161..1434 | 100 | == | Minus |
X | 4654496..4654540 | 79..123 | 100 | <- | Minus |
X | 4655405..4655482 | 1..78 | 100 | Minus |
Translation from 153 to 656
> IP01307.hyp MVYDMSHMAAGPPQSISLSRYYLVDDDEMIGPNNPHLVNEDYAASTTLDI DKRFQARMACETAAQPAPPPPPTPAPRRRTTPIAHLDPSELVGLSREERR RRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEIL KLAICYIAYLNHVLETP*
Translation from 190 to 693
> IP01307.pep MVYDMSHMAAGPPQSISLSRYYLVDDDEMIGPNNPHLVNEDYAASTTLDI DKRFQARMACETAAQPAPPPPPTPAPRRRTTPIAHLDPSELVGLSREERR RRRRATLKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEIL KLAICYIAYLNHVLETP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20856-PA | 168 | GF20856-PA | 1..168 | 1..167 | 655 | 94.6 | Plus |
Dana\GF21374-PA | 375 | GF21374-PA | 178..228 | 115..165 | 156 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18528-PA | 167 | GG18528-PA | 1..167 | 1..167 | 859 | 98.2 | Plus |
Dere\GG18617-PA | 372 | GG18617-PA | 168..218 | 115..165 | 157 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17630-PA | 178 | GH17630-PA | 1..178 | 1..167 | 576 | 82.1 | Plus |
Dgri\GH24106-PA | 385 | GH24106-PA | 175..225 | 115..165 | 154 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HLH4C-PA | 167 | CG3052-PA | 1..167 | 1..167 | 868 | 100 | Plus |
HLH4C-PB | 191 | CG3052-PB | 1..167 | 1..167 | 868 | 100 | Plus |
Fer3-PA | 195 | CG6913-PA | 24..142 | 65..164 | 142 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16068-PA | 178 | GI16068-PA | 1..178 | 1..167 | 591 | 79.8 | Plus |
Dmoj\GI14376-PA | 380 | GI14376-PA | 164..214 | 115..165 | 156 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14555-PA | 168 | GL14555-PA | 1..168 | 1..167 | 630 | 92.3 | Plus |
Dper\GL26737-PA | 415 | GL26737-PA | 169..219 | 115..165 | 149 | 60.8 | Plus |
Dper\GL18976-PA | 173 | GL18976-PA | 55..114 | 106..165 | 142 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15893-PA | 168 | GA15893-PA | 1..168 | 1..167 | 629 | 92.3 | Plus |
Dpse\GA15411-PA | 361 | GA15411-PA | 168..218 | 115..165 | 153 | 60.8 | Plus |
Dpse\GA14815-PA | 173 | GA14815-PA | 55..114 | 106..165 | 142 | 48.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12676-PA | 167 | GM12676-PA | 1..167 | 1..167 | 857 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16284-PA | 267 | GD16284-PA | 101..267 | 1..167 | 876 | 98.8 | Plus |
Dsim\GD24607-PA | 375 | GD24607-PA | 172..222 | 115..165 | 157 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15714-PA | 175 | GJ15714-PA | 1..175 | 1..167 | 582 | 84.6 | Plus |
Dvir\GJ19415-PA | 390 | GJ19415-PA | 181..231 | 115..165 | 156 | 62.7 | Plus |
Dvir\GJ17522-PA | 133 | GJ17522-PA | 19..78 | 106..165 | 137 | 48.3 | Plus |