Clone IP01327 Report

Search the DGRC for IP01327

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:13
Well:27
Vector:pOT2
Associated Gene/TranscriptTgs1-RB
Protein status:IP01327.pep: gold
Preliminary Size:2020
Sequenced Size:2053

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31241 2005-01-01 Successful iPCR screen
CG31241 2008-04-29 Release 5.5 accounting
CG42350 2008-08-15 Release 5.9 accounting
CG31241 2008-08-15 Release 5.9 accounting
CG31241 2008-12-18 5.12 accounting
CG42350 2008-12-18 5.12 accounting

Clone Sequence Records

IP01327.complete Sequence

2053 bp (2053 high quality bases) assembled on 2005-08-25

GenBank Submission: BT022165

> IP01327.complete
CATGTTGAGTTTATCATTCCGGGTGTTTTGATTTTGTTCGGAATTCTTGG
TTTTTTTCCAAGAGAGTTATGTCCCTGGTGCCAGAAGCCTCTACCTCGGC
GCCCAAGTACTGCTACTTCTTCAAGACCCTGCTGGTGGAGGAACTGGAGC
TGGAAACTTCCTACCACAACCTGCACTACGGTCAGTGCGCATTAATTGGA
CGTCTGGCGTTCAAGGCGAATCAGTACCGCCTAGAAAACGTGCGCGTTAA
GTGTTTGCCAAAGAAGTACTCCTTGGGCGAGGGCACCGTATCCTTGCTTA
TTCTTGGCCTTACCCATGACAAAGTCGTCGAAAATCGCGTGAGTACCGGC
CGCTACTGCATTGTGCGTGGTGAAGTGGTGCTACATAATGTGCAGCATCC
CAAAGGTGCCAAACTGACCGCCGGCGGTGTCTACGACAAGATCAATAGTC
TGTCCAACGATCCGTTGGCCCAAAAACAGTATCTCAGCGCGCTACTTGCC
ACCTACAGACCGGCCATCGACTTATGGTACATCCAGGTCATCGACAGAGC
CGAGGACTTGCTGACTCGCAGGCTGGAGATGAGAAGTCTGATCGAGAAAT
GAACACACACCACCTGACCACCTCGCGAACCAATCCGCAGTTCTATATAT
TCAGTCAGCTCTTTGGTAACGATTTCGACTGGAATAATTGCAATTGGGGG
GGCATTCAAAACGTTACCTGGAAAGAATTCTGGCAGCGTGAGGGGCATGA
GCTGCTCGAGCAAAAGTGGCACAAGCGGTTTCCCGAATACAAAGATCTTA
TCGAGGTGGTTTCGTCGGAGGAGCAAGGCCTTTGGCAGGAACTGTGGGAG
AAGCACGCCAGCGATTACAGTGAAAAGTTCTGGTATATATTTAGCTGTGC
CTTTGAGAACTACCAACACGATTTGGCCAAATCATTTGGCCTTGACGTCG
CTGAAAACTCAGAAGATGTTGAGGAGGACTTGCAGAACCTAAGCCTTACA
AATAAGCCAATAAAATCGAAACAGCAAAGGGTCACAGAGAAAGAGGAGGA
CGAATCATACTTGACTGCCAACGACGATCCCGAGGATTGTGACGAGGAAC
AACAGCTGCGCCTTCTCGGATTGCCAACATCATTTGCGTCGAAGGCAGAT
ATAATTAATTATAGAAAGGAAAGAAAGACACAGTACGAACTATCTAGCAG
CGATAGCGAGGACGATCATGATCTGTTGACCATGGAGAACAACGAAAACG
AGGCTCTGCACGGCGTTCAGAGCGGTTCTGTTAAAAAGAAAAAACGACGG
CAAAGGCAAATAAAAAAACTCAAGGCCAGGATGCCAGAGTGCATGCAAGA
GGATAACAACAAAATGGTCAAGTACTGGGTCAAGCGATTCTCGCTGTTCT
CCCGCTTCGATCAGGGCATTCGGCTGGACCGCGAGAGCTGGTTCTCGGTG
ACACCCGAGAAGATTGCCAAACAAACGGCCCGACGACTGGCCTGCGACGT
GATCGTAGATGCTTTCTGTGGATGCGGCGGCAATGCCATTCAGTTTGCAA
ACACCTGTGGACGCGTAATTGCTGTGGACATCGATGCCGAGAAGTTGGCC
ATGGCCAAGCATAATGCCGGCATTTATGGTGTGGCCCATAAGATCGAGTT
TATCCACGCCGATTTTCTGCAGTTTGCGGCCAGCACAAAGCTGCGCCCAA
ATGTGGTTTTCCTGAGCCCTCCGTGGGGTGGTCCTGACTACCAAAAGCAG
GCCACCTTTGATATCGAAACAGGTCTCCTGCCCGTGGGTGCTAGCCAACT
GATGCAGCTGTCCCGTAGCCTGGCATCTGACGTAGCTTTCTTTCTGCCAC
GCAACGCCAATATGAAGCAGGTGGTCGCTCTAAGTGGAGTTGGGCAGCAG
TGCGAGGTGGAGCACAACTATCTGGACACCCGAATGGTTGCGCTCACTGC
TTATTATGGTAAAGGAATCATAAAGGGTTCAGTGGGAGAAGATGAGTAGG
ATTCGATTGAGAGTAATTTCAATAACATAATATGAAAAAAAAAAAAAAAA
AAA

IP01327.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:30:08
Subject Length Description Subject Range Query Range Score Percent Strand
moi-RA 2089 moi-RA 19..2049 1..2028 10070 99.8 Plus
tatl-RB 2089 tatl-RB 19..2049 1..2028 10070 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:09:37
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 14080166..14081931 263..2028 8815 99.9 Plus
chr3R 27901430 chr3R 14079842..14080107 1..263 1250 98.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:31:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:09:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18255872..18257637 263..2028 8815 99.9 Plus
3R 32079331 3R 18255548..18255813 1..263 1250 98.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:21:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 17996703..17998468 263..2028 8815 99.9 Plus
3R 31820162 3R 17996379..17996644 1..263 1260 98.8 Plus
Blast to na_te.dros performed on 2019-03-15 19:09:35 has no hits.

IP01327.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:10:46 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 14079842..14080106 1..262 98 -> Plus
chr3R 14080166..14081936 263..2034 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:14:47 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
CG31241-RB 1..1401 599..1999 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:52:56 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
tatl-RB 1..1401 599..1999 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:43:50 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
Tgs1-RB 1..1401 599..1999 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:33:39 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
CG31241-RB 1..1401 599..1999 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:11:48 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
Tgs1-RB 1..1401 599..1999 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:27:36 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
CG42350-RA 1..2036 1..2034 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:52:55 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
moi-RA 19..2054 1..2034 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:43:50 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
Tgs1-RB 19..2054 1..2034 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:33:39 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
CG42350-RA 1..2036 1..2034 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:11:48 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
moi-RA 19..2054 1..2034 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:10:46 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18255548..18255812 1..262 98 -> Plus
3R 18255872..18257642 263..2034 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:10:46 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18255548..18255812 1..262 98 -> Plus
3R 18255872..18257642 263..2034 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:10:46 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18255548..18255812 1..262 98 -> Plus
3R 18255872..18257642 263..2034 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:43:50 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14081270..14081534 1..262 98 -> Plus
arm_3R 14081594..14083364 263..2034 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:12:12 Download gff for IP01327.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17996379..17996643 1..262 98 -> Plus
3R 17996703..17998473 263..2034 99   Plus

IP01327.pep Sequence

Translation from 523 to 1998

> IP01327.pep
MVHPGHRQSRGLADSQAGDEKSDREMNTHHLTTSRTNPQFYIFSQLFGND
FDWNNCNWGGIQNVTWKEFWQREGHELLEQKWHKRFPEYKDLIEVVSSEE
QGLWQELWEKHASDYSEKFWYIFSCAFENYQHDLAKSFGLDVAENSEDVE
EDLQNLSLTNKPIKSKQQRVTEKEEDESYLTANDDPEDCDEEQQLRLLGL
PTSFASKADIINYRKERKTQYELSSSDSEDDHDLLTMENNENEALHGVQS
GSVKKKKRRQRQIKKLKARMPECMQEDNNKMVKYWVKRFSLFSRFDQGIR
LDRESWFSVTPEKIAKQTARRLACDVIVDAFCGCGGNAIQFANTCGRVIA
VDIDAEKLAMAKHNAGIYGVAHKIEFIHADFLQFAASTKLRPNVVFLSPP
WGGPDYQKQATFDIETGLLPVGASQLMQLSRSLASDVAFFLPRNANMKQV
VALSGVGQQCEVEHNYLDTRMVALTAYYGKGIIKGSVGEDE*

IP01327.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:13:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23076-PA 218 GF23076-PA 1..217 270..485 1007 82.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:13:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22804-PA 608 GG22804-PA 157..608 39..491 2119 88.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:13:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18564-PA 438 GH18564-PA 1..434 26..483 1324 56.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:57:12
Subject Length Description Subject Range Query Range Score Percent Strand
Tgs1-PB 466 CG44890-PB 1..466 26..491 2480 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:13:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24763-PA 453 GI24763-PA 1..444 26..483 1364 57.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:13:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21793-PA 479 GL21793-PA 1..461 26..484 1467 64.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:13:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16116-PA 479 GA16116-PA 1..461 26..484 1491 63.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:13:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15294-PA 629 GM15294-PA 157..629 16..491 2385 93.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:13:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19221-PA 629 GD19221-PA 157..629 16..491 2371 92.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:13:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22549-PA 466 GJ22549-PA 1..462 26..489 1426 60.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22390-PA 226 GK22390-PA 2..212 276..485 926 79.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25528-PA 607 GE25528-PA 157..607 39..491 2056 86.3 Plus

IP01327.hyp Sequence

Translation from 523 to 1998

> IP01327.hyp
MVHPGHRQSRGLADSQAGDEKSDREMNTHHLTTSRTNPQFYIFSQLFGND
FDWNNCNWGGIQNVTWKEFWQREGHELLEQKWHKRFPEYKDLIEVVSSEE
QGLWQELWEKHASDYSEKFWYIFSCAFENYQHDLAKSFGLDVAENSEDVE
EDLQNLSLTNKPIKSKQQRVTEKEEDESYLTANDDPEDCDEEQQLRLLGL
PTSFASKADIINYRKERKTQYELSSSDSEDDHDLLTMENNENEALHGVQS
GSVKKKKRRQRQIKKLKARMPECMQEDNNKMVKYWVKRFSLFSRFDQGIR
LDRESWFSVTPEKIAKQTARRLACDVIVDAFCGCGGNAIQFANTCGRVIA
VDIDAEKLAMAKHNAGIYGVAHKIEFIHADFLQFAASTKLRPNVVFLSPP
WGGPDYQKQATFDIETGLLPVGASQLMQLSRSLASDVAFFLPRNANMKQV
VALSGVGQQCEVEHNYLDTRMVALTAYYGKGIIKGSVGEDE*

IP01327.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:18:53
Subject Length Description Subject Range Query Range Score Percent Strand
Tgs1-PB 466 CG44890-PB 1..466 26..491 2480 100 Plus