Clone IP01389 Report

Search the DGRC for IP01389

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:13
Well:89
Vector:pOT2
Associated Gene/TranscriptDebcl-RA
Protein status:IP01389.pep: gold
Preliminary Size:1626
Sequenced Size:1743

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG33134 2005-01-01 Successful iPCR screen
debcl 2008-04-29 Release 5.5 accounting
debcl 2008-08-15 Release 5.9 accounting
debcl 2008-12-18 5.12 accounting

Clone Sequence Records

IP01389.complete Sequence

1743 bp (1743 high quality bases) assembled on 2005-08-25

GenBank Submission: BT022157

> IP01389.complete
AACTCGAAAGAACCTAGATCGCTGATCGGAGAACCGTGGAACCCGTGGAA
CCGTAACCGTGAAAGTGGGGAATCGAAGATAGAACGGAGAGGGTGGTAGG
CCGATTCCCTCTCCCCACTGCCCGTTGAAATTCAGAATACTAAGCTCTCG
GTTAAACGCGTCGAAAAAGAAAGCAAGCTCTGAGCGGCTGAAAAAAAAAA
TGAAGTGAAATAAAACTGGGATCGCGGCACCAGCAACAAGTTTTAGTGGC
TCTTCTTTGTGCGTTTCGTTCGTGTTTGCTGCCCTGCGCTTTGCTCGCCA
CATTCGTCGCCGACTTTTATTTTGTTTTGCCCATTTTATCAGAATCGGAG
CACCTCCAAAAAAGCCCAAGACGAGCTGAGCCTCAGCTGCGTCGAGGTGA
GCTGATCCACTCCGCTCCCCTTTCGTGCGCTGCCCACCGCTCCCCACCGC
TCACACCCGATCCCATCCAATCCAATCCGATCCGCTCCGCTCCGAGTGCA
TAGTGCATGCAAAGTCGCGGGGCTGGGCTTTCGGAATTACACAACCCACA
TGGGGCAGCGCCAACAAAGGCCTCAGCAGCAACAATAGCGGGCAGCCAAG
CATTGCCCTGCCCTCGACTTCGACCATGGCTCCCACAACCAGTCCGCCAC
CCAAGCTGGCCAAGTTCAAGTCCTCGTCGCTGGACCACGAGATCTACACG
GCCAATCGCCGCGGCACCATTGCAACGGCCTCCAGCGACTGGAAGGCGCT
CCGCGGAGGCGTCGGTGGAGGAGCAGGAGGACCCGGTAGCGTACCCAATC
CCTCTAACGGACGCTCCCTTCACGCCGGCGGACCCATGACACGGGCCGCC
TCCACATCCTCGCTGGCTAGCAGTACGCGCACGATGACTAACTACCAGGA
GTACAAAATGGATATCATCAACCAGGGGAAATGTCTGTGTGGTCAGTACA
TCAGAGCGCGGCTGCGACGGGCAGGAGTCCTCAACCGGAAGGTGACACAG
CGTTTGCGCAACATCCTGGACCCCGGCTCCTCGCACGTGGTCTATGAAGT
TTTCCCGGCACTGAACAGCATGGGCGAGGAACTGGAGCGGATGCACCCGC
GGGTGTACACAAACATATCGCGACAGCTGTCGAGGGCCCCGTTTGGCGAG
CTGGAGGACAGCGACATGGCGCCCATGTTGCTCAACCTAGTTGCCAAGGA
TCTTTTTCGCTCCAGCATCACCTGGGGCAAGATAATCTCGATATTTGCCG
TATGCGGCGGCTTTGCCATAGACTGCGTGCGCCAGGGACATTTCGACTAC
CTACAGTGCCTGATTGACGGTCTGGCTGAGATCATAGAGGACGACCTGGT
CTACTGGCTGATCGACAACGGCGGATGGTTGGGCCTGTCGCGGCACATCC
GACCCCGGGTCGGCGAATTTACGTTCTTGGGATGGTTGACGCTGTTCGTG
ACTATCTCTGCAGGCGCATATATGGTCTCAAACGTGTGTCGGCGCATTGG
AGGTCAACTGTATTCGCTGCTGTTCTAGATTCGCTTGGGATCGCGTCGTT
AAGAAATACAATCGTACCATTTAGTCAATGAGAGCTTCAAATCATTCCTG
CTTCCATGGGCACCAGTCGTTTAGTAGTATGTAACGGACCCTGTTTTACG
TATAATATTGTTATTCCCTTTCTCCTCTTTTTGTACATACAAGGCTATTC
TAGGCGCAATAAAGCGTGTGTTGTAAAAAAAAAAAAAAAAAAA

IP01389.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:29:58
Subject Length Description Subject Range Query Range Score Percent Strand
debcl-RA 1759 debcl-RA 31..1756 1..1727 8550 99.7 Plus
debcl.a 1727 debcl.a 1..1724 1..1727 8495 99.6 Plus
debcl.b 1431 debcl.b 627..1428 926..1727 4010 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:34:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 2535854..2536778 1..926 4475 99.1 Plus
chr2R 21145070 chr2R 2539387..2540041 1070..1724 3260 99.8 Plus
chr2R 21145070 chr2R 2539184..2539331 922..1069 740 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:31:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:34:54
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6648655..6649579 1..926 4535 99.6 Plus
2R 25286936 2R 6652188..6652845 1070..1727 3290 100 Plus
2R 25286936 2R 6651985..6652132 922..1069 740 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:20:57
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 6649854..6650778 1..926 4545 99.5 Plus
2R 25260384 2R 6653387..6654044 1070..1727 3290 100 Plus
2R 25260384 2R 6653184..6653331 922..1069 740 100 Plus
Blast to na_te.dros performed on 2019-03-15 21:34:54 has no hits.

IP01389.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:35:50 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 2535854..2536257 1..405 98 == Plus
chr2R 2536347..2536777 495..925 99 -> Plus
chr2R 2539188..2539331 926..1069 100 -> Plus
chr2R 2539387..2540041 1070..1724 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:14:59 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 1..903 626..1528 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:52:40 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 1..903 626..1528 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:52:42 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 1..903 626..1528 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:33:24 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 1..903 626..1528 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:57:37 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
Debcl-RA 1..903 626..1528 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:27:19 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 1..1626 87..1713 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:52:40 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 1..1723 1..1724 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:52:42 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 2..1724 1..1724 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:33:25 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
debcl-RA 1..1626 87..1713 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:57:37 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
Debcl-RA 2..1724 1..1724 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:35:50 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6651989..6652132 926..1069 100 -> Plus
2R 6648655..6649578 1..925 99 -> Plus
2R 6652188..6652842 1070..1724 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:35:50 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6651989..6652132 926..1069 100 -> Plus
2R 6648655..6649578 1..925 99 -> Plus
2R 6652188..6652842 1070..1724 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:35:50 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6651989..6652132 926..1069 100 -> Plus
2R 6648655..6649578 1..925 99 -> Plus
2R 6652188..6652842 1070..1724 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:52:42 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2536160..2537083 1..925 99 -> Plus
arm_2R 2539494..2539637 926..1069 100 -> Plus
arm_2R 2539693..2540347 1070..1724 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:11:56 Download gff for IP01389.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6649854..6650777 1..925 99 -> Plus
2R 6653188..6653331 926..1069 100 -> Plus
2R 6653387..6654041 1070..1724 100   Plus

IP01389.pep Sequence

Translation from 625 to 1527

> IP01389.pep
MAPTTSPPPKLAKFKSSSLDHEIYTANRRGTIATASSDWKALRGGVGGGA
GGPGSVPNPSNGRSLHAGGPMTRAASTSSLASSTRTMTNYQEYKMDIINQ
GKCLCGQYIRARLRRAGVLNRKVTQRLRNILDPGSSHVVYEVFPALNSMG
EELERMHPRVYTNISRQLSRAPFGELEDSDMAPMLLNLVAKDLFRSSITW
GKIISIFAVCGGFAIDCVRQGHFDYLQCLIDGLAEIIEDDLVYWLIDNGG
WLGLSRHIRPRVGEFTFLGWLTLFVTISAGAYMVSNVCRRIGGQLYSLLF
*

IP01389.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:15:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11057-PA 305 GF11057-PA 1..305 1..300 1309 88.4 Plus
Dana\GF11452-PA 271 GF11452-PA 88..266 96..273 520 50.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:15:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23208-PA 300 GG23208-PA 1..300 1..300 1547 97 Plus
Dere\GG20214-PA 298 GG20214-PA 88..284 96..291 529 48.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:15:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21025-PA 302 GH21025-PA 16..302 10..300 1143 78.4 Plus
Dgri\GH21024-PA 298 GH21024-PA 86..293 96..300 517 45.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:14:48
Subject Length Description Subject Range Query Range Score Percent Strand
Debcl-PA 300 CG33134-PA 1..300 1..300 1572 100 Plus
Buffy-PA 299 CG8238-PA 88..284 96..291 521 47.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:15:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18625-PA 319 GI18625-PA 25..319 6..300 1250 82.6 Plus
Dmoj\GI18624-PA 298 GI18624-PA 86..293 96..300 511 44.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20359-PA 298 GL20359-PA 1..298 1..300 1279 85.9 Plus
Dper\GL10080-PA 296 GL10080-PA 86..282 96..291 526 47.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17309-PA 298 GA17309-PA 1..298 1..300 1279 85.9 Plus
Dpse\GA20921-PA 296 GA20921-PA 86..282 96..291 526 47.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:15:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20882-PA 302 GM20882-PA 1..302 1..300 1570 98.3 Plus
Dsec\GM21300-PA 299 GM21300-PA 88..284 96..291 530 47.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10412-PA 300 GD10412-PA 1..300 1..300 1565 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ21634-PA 315 GJ21634-PA 27..315 10..300 1238 83.2 Plus
Dvir\GJ21633-PA 298 GJ21633-PA 86..293 96..300 510 44.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19537-PA 310 GK19537-PA 20..310 10..300 1259 88 Plus
Dwil\GK17878-PA 298 GK17878-PA 88..293 96..300 534 46.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19062-PA 301 GE19062-PA 1..301 1..300 1535 96.3 Plus
Dyak\GE12374-PA 297 GE12374-PA 88..283 96..291 527 48.7 Plus

IP01389.hyp Sequence

Translation from 625 to 1527

> IP01389.hyp
MAPTTSPPPKLAKFKSSSLDHEIYTANRRGTIATASSDWKALRGGVGGGA
GGPGSVPNPSNGRSLHAGGPMTRAASTSSLASSTRTMTNYQEYKMDIINQ
GKCLCGQYIRARLRRAGVLNRKVTQRLRNILDPGSSHVVYEVFPALNSMG
EELERMHPRVYTNISRQLSRAPFGELEDSDMAPMLLNLVAKDLFRSSITW
GKIISIFAVCGGFAIDCVRQGHFDYLQCLIDGLAEIIEDDLVYWLIDNGG
WLGLSRHIRPRVGEFTFLGWLTLFVTISAGAYMVSNVCRRIGGQLYSLLF
*

IP01389.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 10:22:01
Subject Length Description Subject Range Query Range Score Percent Strand
Debcl-PA 300 CG33134-PA 1..300 1..300 1572 100 Plus
Buffy-PA 299 CG8238-PA 88..284 96..291 521 47.7 Plus