Clone IP01413 Report

Search the DGRC for IP01413

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:14
Well:13
Vector:pOT2
Associated Gene/Transcriptac-RA
Protein status:IP01413.pep: gold
Preliminary Size:961
Sequenced Size:962

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3796 2005-01-01 Successful iPCR screen
ac 2008-04-29 Release 5.5 accounting
ac 2008-08-15 Release 5.9 accounting
ac 2008-12-18 5.12 accounting

Clone Sequence Records

IP01413.complete Sequence

962 bp (962 high quality bases) assembled on 2005-08-25

GenBank Submission: BT022154

> IP01413.complete
AAGCAAGGAGCATCGTCACACAATAACGTTATACTATCTCTTAAAATGGC
TTTGGGCAGCGAAAATCACTCTGTTTTCAACGACGACGAGGAGTCATCTT
CGGCCTTTAATGGACCCTCTGTTATCCGGAGAAATGCCCGGGAACGCAAC
CGCGTAAAGCAGGTCAACAATGGCTTCAGCCAACTACGACAACATATCCC
TGCGGCCGTAATAGCCGATTTAAGCAATGGTCGCCGGGGAATTGGTCCCG
GCGCCAATAAAAAACTGAGCAAAGTTAGCACACTGAAAATGGCAGTAGAG
TACATACGGCGCTTGCAGAAAGTTCTTCATGAAAACGACCAGCAGAAACA
GAAACAGTTGCATTTGCAGCAGCAACATTTGCACTTTCAGCAGCAGCAAC
AGCATCAACACTTATACGCCTGGCACCAAGAGTTGCAGTTGCAATCTCCA
ACTGGCAGCACAAGTTCCTGCAACAGCATTAGCTCTTATTGCAAGCCAGC
AACATCGACGATTCCGGGAGCAACACCTCCTAACAATTTTCATACCAAGT
TGGAAGCCAGTTTTGAAGACTACCGTAACAATTCCTGCAGTTCTGGTACT
GAAGATGAGGACATCCTCGACTATATATCACTCTGGCAGGACGACCTGTA
AAAAAACAGATCAAATCTTCAGCTATTGCTAGTCGCACCCAACCATAACA
CACATCAAACCATTGATTGGCCAACAAGTATTACCTCAGCCACAAAGTAT
TTATATTCCCTAGAACTACCTTTTTGCCTTATAAATTAGTATTTAAGGTT
TTATATAGTTTCTAAGGATAGTTTCTAATGGAAGACAATTTATATTTAAG
TTTTTTTTTATAGCATACATTGAGGACATTAAACTGATATATATAAAATA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA

IP01413.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:30:03
Subject Length Description Subject Range Query Range Score Percent Strand
ac-RA 917 ac-RA 19..917 1..899 4495 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:28:30
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 264076..264974 1..899 4495 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:31:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 370049..370947 1..899 4495 100 Plus
Y 3667352 Y 3159783..3159841 888..946 220 91.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:21:02
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 378147..379045 1..899 4495 100 Plus
Y 3410481 Y 3006253..3006311 888..946 220 91.5 Plus
Blast to na_te.dros performed 2019-03-16 06:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
TART-A 13424 TART-A 13424bp 9927..10002 382..457 110 60.5 Plus

IP01413.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:29:36 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 264076..264974 1..899 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:15:04 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 1..606 46..651 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:52:48 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 1..606 46..651 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:00:02 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 1..606 46..651 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:33:30 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 1..606 46..651 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:20:53 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 1..606 46..651 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:27:27 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 19..917 1..899 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:52:48 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 19..917 1..899 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:02 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 19..917 1..899 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:33:30 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 19..917 1..899 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:20:53 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
ac-RA 19..917 1..899 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:29:36 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
X 370049..370947 1..899 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:29:36 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
X 370049..370947 1..899 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:29:36 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
X 370049..370947 1..899 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:02 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 264082..264980 1..899 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:12:04 Download gff for IP01413.complete
Subject Subject Range Query Range Percent Splice Strand
X 378147..379045 1..899 100   Plus

IP01413.hyp Sequence

Translation from 0 to 650

> IP01413.hyp
KQGASSHNNVILSLKMALGSENHSVFNDDEESSSAFNGPSVIRRNARERN
RVKQVNNGFSQLRQHIPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVE
YIRRLQKVLHENDQQKQKQLHLQQQHLHFQQQQQHQHLYAWHQELQLQSP
TGSTSSCNSISSYCKPATSTIPGATPPNNFHTKLEASFEDYRNNSCSSGT
EDEDILDYISLWQDDL*

IP01413.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:30:07
Subject Length Description Subject Range Query Range Score Percent Strand
ac-PA 201 CG3796-PA 1..201 16..216 1057 100 Plus
l(1)sc-PA 257 CG3839-PA 83..256 39..214 291 41.7 Plus
sc-PA 345 CG3827-PA 100..344 40..214 264 35.2 Plus
ase-PA 486 CG3258-PA 160..227 40..109 203 64.3 Plus

IP01413.pep Sequence

Translation from 45 to 650

> IP01413.pep
MALGSENHSVFNDDEESSSAFNGPSVIRRNARERNRVKQVNNGFSQLRQH
IPAAVIADLSNGRRGIGPGANKKLSKVSTLKMAVEYIRRLQKVLHENDQQ
KQKQLHLQQQHLHFQQQQQHQHLYAWHQELQLQSPTGSTSSCNSISSYCK
PATSTIPGATPPNNFHTKLEASFEDYRNNSCSSGTEDEDILDYISLWQDD
L*

IP01413.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 14:16:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21449-PA 415 GF21449-PA 1..215 1..201 569 67 Plus
Dana\GF21450-PA 326 GF21450-PA 77..145 25..96 240 65.3 Plus
Dana\GF21451-PA 257 GF21451-PA 83..256 24..199 225 40.8 Plus
Dana\GF21452-PA 483 GF21452-PA 195..250 37..94 166 62.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:16:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\ac-PA 201 GG12781-PA 1..201 1..201 833 93.5 Plus
Dere\sc-PA 335 GG12783-PA 88..156 25..96 234 63.9 Plus
Dere\l(1)sc-PA 256 GG12784-PA 82..255 24..199 214 39.4 Plus
Dere\ase-PA 484 GG12785-PA 172..227 37..94 162 60.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 14:16:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24339-PA 252 GH24339-PA 60..135 23..98 362 89.5 Plus
Dgri\GH24340-PA 378 GH24340-PA 116..184 25..96 237 65.3 Plus
Dgri\GH24341-PA 284 GH24341-PA 97..174 24..105 203 64.6 Plus
Dgri\GH24345-PA 574 GH24345-PA 222..277 37..94 152 58.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:56
Subject Length Description Subject Range Query Range Score Percent Strand
ac-PA 201 CG3796-PA 1..201 1..201 1057 100 Plus
l(1)sc-PA 257 CG3839-PA 83..256 24..199 291 41.7 Plus
sc-PA 345 CG3827-PA 100..344 25..199 264 35.2 Plus
ase-PA 486 CG3258-PA 160..227 25..94 203 64.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 14:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10997-PA 262 GI10997-PA 56..134 21..99 365 84.8 Plus
Dmoj\GI10998-PA 361 GI10998-PA 100..168 25..96 239 65.3 Plus
Dmoj\GI10999-PA 266 GI10999-PA 96..171 24..105 201 67.1 Plus
Dmoj\GI11000-PA 664 GI11000-PA 229..284 37..94 162 60.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 14:16:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20377-PA 225 GL20377-PA 1..105 1..101 385 74.3 Plus
Dper\GL20378-PA 347 GL20378-PA 100..163 30..96 213 61.2 Plus
Dper\GL20379-PA 264 GL20379-PA 83..263 24..199 203 40.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 14:16:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17691-PA 226 GA17691-PA 1..105 1..101 385 74.3 Plus
Dpse\GA29095-PA 371 GA29095-PA 108..176 25..96 239 65.3 Plus
Dpse\GA17723-PA 264 GA17723-PA 83..263 24..199 203 40.5 Plus
Dpse\GA17007-PA 619 GA17007-PA 202..257 37..94 160 60.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:16:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19060-PA 201 GM19060-PA 1..201 1..201 1047 97 Plus
Dsec\GM19062-PA 334 GM19062-PA 88..156 25..96 235 63.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 14:16:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\sc-PA 334 GD16501-PA 88..156 25..96 235 63.9 Plus
Dsim\l(1)sc-PA 257 GD16503-PA 83..256 24..199 218 41.1 Plus
Dsim\GD16504-PA 466 GD16504-PA 172..227 37..94 162 60.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 14:16:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\ac-PA 220 GJ15592-PA 1..102 1..98 386 74.5 Plus
Dvir\sc-PA 351 GJ15596-PA 97..165 25..96 238 65.3 Plus
Dvir\GJ15597-PA 284 GJ15597-PA 93..169 24..105 196 65.9 Plus
Dvir\GJ15598-PA 616 GJ15598-PA 192..247 37..94 159 56.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:16:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25269-PA 236 GK25269-PA 27..236 22..201 493 55.7 Plus
Dwil\GK25270-PA 377 GK25270-PA 130..198 25..96 238 65.3 Plus
Dwil\GK25271-PA 280 GK25271-PA 100..279 24..199 211 41.1 Plus
Dwil\GK25272-PA 652 GK25272-PA 225..280 37..94 160 58.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 14:16:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\ac-PA 201 GE16609-PA 1..201 1..201 808 91 Plus
Dyak\sc-PA 334 GE16610-PA 88..156 25..96 235 63.9 Plus
Dyak\l(1)sc-PA 256 GE16611-PA 82..255 24..199 210 39.4 Plus
Dyak\ase-PA 494 GE16612-PA 172..227 37..94 162 60.3 Plus