Clone IP01594 Report

Search the DGRC for IP01594

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:15
Well:94
Vector:pOT2
Associated Gene/TranscriptE(spl)mdelta-HLH-RA
Protein status:IP01594.pep: gold
Preliminary Size:1016
Sequenced Size:1017

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8328 2005-01-01 Successful iPCR screen
HLHmdelta 2008-04-29 Release 5.5 accounting
HLHmdelta 2008-08-15 Release 5.9 accounting
HLHmdelta 2008-12-18 5.12 accounting

Clone Sequence Records

IP01594.complete Sequence

1017 bp assembled on 2007-04-18

GenBank Submission: BT022133

> IP01594.complete
GCAGCGACATCGCAACATCGCAACTTTATTTACAAACAATCACCACACCA
AATCAAAACCCATTATACACAATGGCCGTTCAGGGTCAGAGATTTATGAC
CAAGACTCAGCATTACCGCAAGGTGACCAAACCCCTCCTGGAGCGCAAAA
GACGCGCCCGGATGAACCTGTATCTGGACGAACTCAAGGATCTCATCGTG
GACACCATGGATGCGCAGGGCGAACAGGTCAGCAAGCTGGAGAAAGCTGA
CATCTTAGAGCTCACCGTCAACTATCTGAAAGCGCAACAGCAGCAGCGAG
TGGCCAATCCTCAATCCCCACCACCCGACCAAGTTAACCTGGACAAATTT
CGGGCCGGATACACCCAGGCTGCCTACGAGGTCTCGCACATATTCTCTAC
GGTTCCCGGCTTGGATCTCAAATTCGGCACCCACCTGATGAAGCAATTGG
GTCACCAGCTCAAGGACATGAAACAGGAAGAAGAAATCATCGATATGGCC
GAAGAACCAGTTAATCTAGCCGACCAAAAACGTTCAAAGTCTCCGCGAGA
AGAGGATATTCATCATGGCGAAGAAGTCTGGCGCCCCTGGTGAAGGGCAT
TCCATATATACGCAACCAATTAACATTGATAGCTTTACTACTCAGTTTCA
TTAAGAAACAATCCAAGTTTTCCAAGGTCTAGTGTAAACATTTGCCTCAG
AATCGTATTTAGTTGGTAGTTGATTTGATATGATGTGATGTTCCTGTGAT
AGTTCTTAAGTTCGTATTTTGTATTTGATCTCCCATAGGCTTACTGATTC
ATGTATTTAATTCATTGTAATTTATTTCATCAACTTTGCAAGAGCTTCCC
CACCGAGCTTCCACTTAGCCTCATTAAGAACAAATTTTTGTGTATGTTTT
AAAATTATATTTTTCGCTTTACACCATTAAGTATAAGCCATGAACATTTG
AATAATAAAATGAACGTAAACTGAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA

IP01594.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:42:44
Subject Length Description Subject Range Query Range Score Percent Strand
HLHmdelta-RA 1016 HLHmdelta-RA 41..1016 1..976 4880 100 Plus
HLHm3-RA 1422 HLHm3-RA 318..424 96..202 220 80.3 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:10:21
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 21820650..21821622 1..973 4865 100 Plus
chr3R 27901430 chr3R 21845019..21845191 96..268 235 75.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:31:57 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:10:19
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25997661..25998636 1..976 4880 100 Plus
3R 32079331 3R 26022032..26022204 96..268 235 75.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:40:13
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 25738492..25739467 1..976 4880 100 Plus
3R 31820162 3R 25762863..25762969 96..202 220 80.3 Plus
Blast to na_te.dros performed on 2019-03-15 13:10:19 has no hits.

IP01594.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:11:18 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 21820650..21821622 1..973 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:15:28 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
HLHmdelta-RA 1..522 72..593 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:18:50 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
HLHmdelta-RA 1..522 72..593 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:58:43 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
E(spl)mdelta-HLH-RA 1..522 72..593 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:15:07 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
HLHmdelta-RA 1..522 72..593 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:23:45 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
E(spl)mdelta-HLH-RA 1..522 72..593 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:34:26 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
HLHmdelta-RA 41..1013 1..973 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:18:49 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
HLHmdelta-RA 41..1013 1..973 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:58:43 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
E(spl)mdelta-HLH-RA 41..1013 1..973 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:15:07 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
HLHmdelta-RA 41..1013 1..973 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:23:45 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
E(spl)mdelta-HLH-RA 41..1013 1..973 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:18 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25997661..25998633 1..973 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:18 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25997661..25998633 1..973 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:11:18 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25997661..25998633 1..973 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:58:43 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 21823383..21824355 1..973 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:07:53 Download gff for IP01594.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25738492..25739464 1..973 100   Plus

IP01594.hyp Sequence

Translation from 2 to 592

> IP01594.hyp
SDIATSQLYLQTITTPNQNPLYTMAVQGQRFMTKTQHYRKVTKPLLERKR
RARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYLKAQQQQRV
ANPQSPPPDQVNLDKFRAGYTQAAYEVSHIFSTVPGLDLKFGTHLMKQLG
HQLKDMKQEEEIIDMAEEPVNLADQKRSKSPREEDIHHGEEVWRPW*

IP01594.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:34:23
Subject Length Description Subject Range Query Range Score Percent Strand
E(spl)mdelta-HLH-PA 173 CG8328-PA 1..173 24..196 900 100 Plus
E(spl)mgamma-HLH-PA 205 CG8333-PA 9..205 32..196 324 39.6 Plus
E(spl)mbeta-HLH-PA 195 CG14548-PA 7..195 32..196 308 40 Plus
E(spl)m7-HLH-PA 186 CG8361-PA 7..147 32..180 280 43.6 Plus
E(spl)m3-HLH-PA 224 CG8346-PA 5..140 32..159 252 42.3 Plus

IP01594.pep Sequence

Translation from 71 to 592

> IP01594.pep
MAVQGQRFMTKTQHYRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQG
EQVSKLEKADILELTVNYLKAQQQQRVANPQSPPPDQVNLDKFRAGYTQA
AYEVSHIFSTVPGLDLKFGTHLMKQLGHQLKDMKQEEEIIDMAEEPVNLA
DQKRSKSPREEDIHHGEEVWRPW*

IP01594.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:20:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16795-PA 182 GF16795-PA 1..182 1..173 759 81.9 Plus
Dana\GF18225-PA 200 GF18225-PA 7..196 9..173 331 40.3 Plus
Dana\GF16796-PA 205 GF16796-PA 11..134 11..134 307 50 Plus
Dana\GF16801-PA 180 GF16801-PA 7..127 9..138 298 50.8 Plus
Dana\GF16799-PA 224 GF16799-PA 5..135 9..130 254 43.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:20:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11449-PA 173 GG11449-PA 1..173 1..173 903 97.7 Plus
Dere\GG11450-PA 205 GG11450-PA 9..205 9..173 326 39.6 Plus
Dere\GG12207-PA 195 GG12207-PA 7..195 9..173 316 39.5 Plus
Dere\GG11458-PA 186 GG11458-PA 7..139 9..149 286 44.7 Plus
Dere\GG11454-PA 226 GG11454-PA 5..134 9..130 254 44.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:20:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19451-PA 198 GH19451-PA 1..198 1..173 658 69.3 Plus
Dgri\GH18148-PA 210 GH18148-PA 7..135 9..130 316 50.4 Plus
Dgri\GH19452-PA 217 GH19452-PA 11..135 11..134 306 50.4 Plus
Dgri\GH19458-PA 207 GH19458-PA 7..131 9..138 276 48.5 Plus
Dgri\GH19456-PA 228 GH19456-PA 5..136 9..130 250 41.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:11
Subject Length Description Subject Range Query Range Score Percent Strand
E(spl)mdelta-HLH-PA 173 CG8328-PA 1..173 1..173 900 100 Plus
E(spl)mgamma-HLH-PA 205 CG8333-PA 9..205 9..173 324 39.6 Plus
E(spl)mbeta-HLH-PA 195 CG14548-PA 7..195 9..173 308 40 Plus
E(spl)m7-HLH-PA 186 CG8361-PA 7..147 9..157 280 43.6 Plus
E(spl)m3-HLH-PA 224 CG8346-PA 5..140 9..136 252 42.3 Plus
E(spl)m8-HLH-PA 179 CG8365-PA 3..179 8..173 241 33.9 Plus
E(spl)m5-HLH-PA 178 CG6096-PA 11..178 8..173 235 33.9 Plus
h-PB 337 CG6494-PB 19..146 3..136 200 38.8 Plus
h-PA 337 CG6494-PA 19..146 3..136 200 38.8 Plus
dpn-PA 435 CG8704-PA 41..158 16..135 197 37.5 Plus
Hesr-PA 149 CG5927-PA 16..113 10..105 166 36.4 Plus
Hey-PA 425 CG11194-PA 101..199 16..117 161 38.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24685-PA 185 GI24685-PA 1..185 1..173 679 76.9 Plus
Dmoj\GI24686-PA 217 GI24686-PA 9..135 9..134 315 50.4 Plus
Dmoj\GI22910-PA 210 GI22910-PA 7..136 9..130 305 50 Plus
Dmoj\GI24692-PA 207 GI24692-PA 8..134 10..138 276 48.8 Plus
Dmoj\GI24693-PA 173 GI24693-PA 3..173 8..173 261 35.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21813-PA 188 GL21813-PA 1..188 1..173 699 76.6 Plus
Dper\GL21815-PA 214 GL21815-PA 9..134 9..134 313 49.2 Plus
Dper\GL22021-PA 200 GL22021-PA 7..200 9..173 307 39.5 Plus
Dper\GL21822-PA 207 GL21822-PA 7..143 9..148 266 42.2 Plus
Dper\GL21819-PA 225 GL21819-PA 5..133 9..130 254 44.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20991-PA 188 GA20991-PA 1..188 1..173 699 76.6 Plus
Dpse\GA20996-PA 214 GA20996-PA 9..134 9..134 312 49.2 Plus
Dpse\GA13073-PA 200 GA13073-PA 7..200 9..173 307 39.5 Plus
Dpse\GA21018-PA 206 GA21018-PA 7..143 9..148 264 42.2 Plus
Dpse\GA21008-PA 219 GA21008-PA 5..133 9..130 255 44.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM10293-PA 173 GM10293-PA 1..173 1..173 921 100 Plus
Dsec\GM10206-PA 195 GM10206-PA 7..195 9..173 328 41.1 Plus
Dsec\GM10294-PA 205 GM10294-PA 9..205 9..173 326 39.6 Plus
Dsec\GM10299-PA 186 GM10299-PA 7..139 9..149 287 44.7 Plus
Dsec\GM10297-PA 221 GM10297-PA 5..134 9..130 254 44.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\HLHmdelta-PA 173 GD21257-PA 1..173 1..173 921 100 Plus
Dsim\HLHmgamma-PA 205 GD21258-PA 9..205 9..173 326 39.6 Plus
Dsim\HLHmbeta-PA 195 GD18157-PA 7..195 9..173 316 39.5 Plus
Dsim\HLHm7-PA 186 GD21263-PA 7..139 9..149 286 44.7 Plus
Dsim\HLHm3-PA 224 GD21261-PA 5..134 9..130 254 44.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23902-PA 188 GJ23902-PA 1..188 1..173 712 75.1 Plus
Dvir\GJ23903-PA 217 GJ23903-PA 9..135 9..134 316 50.4 Plus
Dvir\GJ23323-PA 209 GJ23323-PA 7..135 9..130 315 50.4 Plus
Dvir\GJ23909-PA 197 GJ23909-PA 7..197 9..173 287 36 Plus
Dvir\GJ23910-PA 182 GJ23910-PA 3..182 8..173 249 33.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14454-PA 184 GK14454-PA 1..184 1..173 705 75.3 Plus
Dwil\GK14455-PA 209 GK14455-PA 9..135 9..134 312 50.4 Plus
Dwil\GK14459-PA 200 GK14459-PA 7..130 9..135 306 51.5 Plus
Dwil\GK12809-PA 201 GK12809-PA 7..142 9..130 288 46.3 Plus
Dwil\GK14458-PA 223 GK14458-PA 5..133 9..130 241 42.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\HLHmdelta-PA 173 GE23643-PA 1..173 1..173 903 97.7 Plus
Dyak\HLHmbeta-PA 195 GE10652-PA 7..195 9..173 331 41.6 Plus
Dyak\HLHmgamma-PA 205 GE23644-PA 9..205 9..173 325 39.1 Plus
Dyak\HLHm7-PA 186 GE23649-PA 7..139 9..149 286 44.7 Plus
Dyak\GE23647-PA 224 GE23647-PA 5..134 9..130 255 44.3 Plus