Clone IP01723 Report

Search the DGRC for IP01723

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:17
Well:23
Vector:pOT2
Associated Gene/TranscriptKua-RA
Protein status:IP01723.pep: gold
Preliminary Size:933
Sequenced Size:1905

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10723 2005-01-01 Successful iPCR screen
Kua 2008-04-29 Release 5.5 accounting
Kua 2008-08-15 Release 5.9 accounting
Kua 2008-12-18 5.12 accounting

Clone Sequence Records

IP01723.complete Sequence

1905 bp (1905 high quality bases) assembled on 2006-09-13

GenBank Submission: BT029029

> IP01723.complete
CAAAGTAGCGATACTATTACTGCAGCTCCCGCGCCCGCGTGTATGTGTGT
GCGAGAGTGCGCTGCGTGCGTGTGTGTGTGTGTACGATGGCGGCCAAGAG
CGATATGGATATTCTGGCCAACTCCATGTACGAGGACGATCCCAATGGCA
ACCTAGCGCCCGCCACCACCAAGGATAAGGAATCAGTCAAGCCGGAGGAG
CTGAAGGTCACCCCCGCTGGCACCAAAGCAACATCCCCCCCCAACTCGGC
GACCTTAGTTTCGACTTCTCCGCGATGGGGTCCGCAGAATAAGGGCGCCC
AGGAACTAGCCTTGTTGTACAGTCCAGGAAAACGTGCCCAGGAAATCATT
TGCGTCTACACCTGCATTGGCCTTATGATCATTAACCTAGCCCTGATTGT
TAGACACTTGCGATTGGAGCGGATTAGTGTCGCCTTTCTGTCCGCCCTGT
GCGGCATTATAACGGCCGACTTTGCTTCCGGCTTGGTTCACTGGGCGGCA
GACACCTGGGGATCGGTGGACATACCGATGATTGGAAAGAACTTCCTGCG
ACCCTTTCGCGAGCATCATCTGGATCCCACATCCATAACGCGACACGATT
TCATTGAGACAAATGGCGACAACTTTATGGTTGGCATACCAATTCTCGGC
TACTTGGCCCACTATTTTTACATCAGGACGCCCAGCGAGATACAGCAACA
CTTCGGCTGGATAGCCTATGTGTTCCTCTGCTCCATATTCGTGGCCATGA
CCAATCAGATACACAAGTGGTCGCATACCTATTGGGGATTGCCGAGGTGG
GTCCTGTTACTCCAGAGCTGTCACATCATCCTGCCACGCAAGCATCATCG
CATCCATCACGTGGCGCCACATGAGACCTACTTTTGCATCACCACCGGGT
GGCTTAACTGGCCACTGGAACGCATCAGATTCTGGTCAACATTCGAGCTC
ATCATCGAGCATTTTACGGGCCTCAAGCCCCGCGATGACGACCTGAAGTG
GGCCAAGAAACTCACATAGTTTCACTGCCCAGCGACTGTATATAGGTAAC
TTGGACCAAAAGCAGCCTTTAATTGCTGAATATGTCACCTTTAAATGTTT
TCATACAATCGGAATGTCTTACAGAATGAAGTAGCTTTAAATGAGACAAG
ATTGCATACATAAGGTTTATATGGTTAATGGCATAGTTCTCAGTTGCATG
TTTGTTAAAAATAGTTGATTATCTGAGTTTAAGTTCGTGTTTTTAAATAC
CATATTACTATTGTACACCTGCACACACTCTCACAACTGAGCGCATAAAC
TAATTGATCTCGCCACAGGTTGATCGTACTACGAGTGAGCCTTAAGTATA
CCTAAATAATAAAATGAACATTTTACTAACTATCGAGCACACGCTTGTCT
GATAAATTTTTTAAGATTTACACACAATAATAATACTCGATATAACATAT
GTAAGCTAGGCGAGTAACTGATTTTGAACCAGGTCCGAGACAAAAAGACA
TTTTAATACTGTCAACAAACGCTGGTTATCAAAGGCTATAAAGTGAATAA
ATTTATTTACAACTACATACATATACATTCAAAAGATAATTAAATAAGGC
GCTGTATGCAATCAAATACGTGACTTAACCTTTGCCTTAAAACGTTTTTA
TAGTATAAACTCTTTTGGAGAAGCGAATTCTGTTTTAGTTGGCACACTTT
TAGTGGCGAGTGTTAGTCATTGTAAGAGACCAGTTTGTATATTTTACTTT
TTCATTGTTTTTAATTTCATTTACAAGAATTAAGAGTAATCGGCGAACCG
AAGAGGTGTTCTTGCACAACGCTGTAATTCTAAGAAGGCAATATTCTTTG
TGATCTGAGAAAATAAATCAATAAGCTTAAAAAAAAAAAAAAAAAAAAAA
AAAAA

IP01723.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
Kua-RA 1878 Kua-RA 1..1878 1..1878 9375 99.9 Plus
Kua.b 1864 Kua.b 70..1864 84..1878 8960 99.9 Plus
Kua.a 1996 Kua.a 202..1996 84..1878 8960 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 19:04:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 20100833..20101776 927..1878 4500 98.6 Plus
chr2L 23010047 chr2L 20099353..20099597 84..328 1225 100 Plus
chr2L 23010047 chr2L 20100319..20100539 538..758 1105 100 Plus
chr2L 23010047 chr2L 20100037..20100251 325..539 1075 100 Plus
chr2L 23010047 chr2L 20100602..20100773 757..928 845 99.4 Plus
chr2L 23010047 chr2L 20096267..20096349 1..83 415 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:32:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 19:04:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20102424..20103379 927..1882 4765 99.9 Plus
2L 23513712 2L 20100944..20101188 84..328 1225 100 Plus
2L 23513712 2L 20101910..20102130 538..758 1105 100 Plus
2L 23513712 2L 20101628..20101842 325..539 1075 100 Plus
2L 23513712 2L 20102193..20102364 757..928 860 100 Plus
2L 23513712 2L 20097858..20097940 1..83 415 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:09:25
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20102424..20103379 927..1882 4765 99.8 Plus
2L 23513712 2L 20100944..20101188 84..328 1225 100 Plus
2L 23513712 2L 20101910..20102130 538..758 1105 100 Plus
2L 23513712 2L 20101628..20101842 325..539 1075 100 Plus
2L 23513712 2L 20102193..20102364 757..928 860 100 Plus
2L 23513712 2L 20097858..20097940 1..83 415 100 Plus
Blast to na_te.dros performed 2019-03-16 19:04:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dm88 4558 Dm88 DM88 4558bp 10..106 1583..1488 131 60.8 Minus
Dm88 4558 Dm88 DM88 4558bp 4370..4466 1583..1488 131 60.8 Minus
mdg1 7480 mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). 1287..1325 1772..1734 114 76.9 Minus
jockey 5020 jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). 4845..4934 1454..1370 114 63.7 Minus

IP01723.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 19:05:57 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 20099353..20099596 84..327 100 -> Plus
chr2L 20100040..20100251 328..539 100 -> Plus
chr2L 20100321..20100539 540..758 100 -> Plus
chr2L 20100604..20100773 759..928 99 -> Plus
chr2L 20100835..20101776 929..1878 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:15:36 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RA 1..933 87..1019 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:27:11 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RB 1..933 87..1019 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:32:09 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RB 1..933 87..1019 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:49:13 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RA 1..933 87..1019 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 14:00:02 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RB 1..933 87..1019 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:57:24 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RA 1..933 87..1019 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:27:11 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RA 1..1878 1..1878 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:32:09 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RA 1..1878 1..1878 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:49:15 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RA 1..933 87..1019 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:00:02 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
Kua-RA 1..1878 1..1878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:05:57 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20101912..20102130 540..758 100 -> Plus
2L 20102195..20102364 759..928 100 -> Plus
2L 20097858..20097940 1..83 100 -> Plus
2L 20100944..20101187 84..327 100 -> Plus
2L 20101631..20101842 328..539 100 -> Plus
2L 20102426..20103375 929..1878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:05:57 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20101912..20102130 540..758 100 -> Plus
2L 20102195..20102364 759..928 100 -> Plus
2L 20097858..20097940 1..83 100 -> Plus
2L 20100944..20101187 84..327 100 -> Plus
2L 20101631..20101842 328..539 100 -> Plus
2L 20102426..20103375 929..1878 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 19:05:57 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20101912..20102130 540..758 100 -> Plus
2L 20102195..20102364 759..928 100 -> Plus
2L 20097858..20097940 1..83 100 -> Plus
2L 20100944..20101187 84..327 100 -> Plus
2L 20101631..20101842 328..539 100 -> Plus
2L 20102426..20103375 929..1878 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:32:09 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20097858..20097940 1..83 100 -> Plus
arm_2L 20100944..20101187 84..327 100 -> Plus
arm_2L 20101631..20101842 328..539 100 -> Plus
arm_2L 20101912..20102130 540..758 100 -> Plus
arm_2L 20102195..20102364 759..928 100 -> Plus
arm_2L 20102426..20103375 929..1878 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:53:50 Download gff for IP01723.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20097858..20097940 1..83 100 -> Plus
2L 20100944..20101187 84..327 100 -> Plus
2L 20101631..20101842 328..539 100 -> Plus
2L 20101912..20102130 540..758 100 -> Plus
2L 20102195..20102364 759..928 100 -> Plus
2L 20102426..20103375 929..1878 99   Plus

IP01723.pep Sequence

Translation from 86 to 1018

> IP01723.pep
MAAKSDMDILANSMYEDDPNGNLAPATTKDKESVKPEELKVTPAGTKATS
PPNSATLVSTSPRWGPQNKGAQELALLYSPGKRAQEIICVYTCIGLMIIN
LALIVRHLRLERISVAFLSALCGIITADFASGLVHWAADTWGSVDIPMIG
KNFLRPFREHHLDPTSITRHDFIETNGDNFMVGIPILGYLAHYFYIRTPS
EIQQHFGWIAYVFLCSIFVAMTNQIHKWSHTYWGLPRWVLLLQSCHIILP
RKHHRIHHVAPHETYFCITTGWLNWPLERIRFWSTFELIIEHFTGLKPRD
DDLKWAKKLT*

IP01723.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:45:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14450-PA 301 GF14450-PA 1..301 1..310 1420 86.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:45:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21223-PA 310 GG21223-PA 1..310 1..310 1621 96.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:45:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13660-PA 302 GH13660-PA 1..302 1..310 1375 81.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:09:52
Subject Length Description Subject Range Query Range Score Percent Strand
Kua-PC 310 CG10723-PC 1..310 1..310 1687 100 Plus
Kua-PD 310 CG10723-PD 1..310 1..310 1687 100 Plus
Kua-PB 310 CG10723-PB 1..310 1..310 1687 100 Plus
Kua-PA 310 CG10723-PA 1..310 1..310 1687 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:45:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17412-PA 308 GI17412-PA 1..308 1..310 1406 83.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:45:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26353-PA 323 GL26353-PA 24..323 1..310 1455 87.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:45:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10523-PA 323 GA10523-PA 24..323 1..310 1454 87.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:45:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17394-PA 309 GM17394-PA 1..309 1..310 1637 98.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:45:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24246-PA 309 GD24246-PA 1..309 1..310 1637 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:45:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18345-PA 307 GJ18345-PA 1..307 1..310 1387 83.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18676-PA 309 GK18676-PA 1..309 1..310 1371 82.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13298-PA 309 GE13298-PA 1..309 1..310 1598 95.8 Plus

IP01723.hyp Sequence

Translation from 86 to 1018

> IP01723.hyp
MAAKSDMDILANSMYEDDPNGNLAPATTKDKESVKPEELKVTPAGTKATS
PPNSATLVSTSPRWGPQNKGAQELALLYSPGKRAQEIICVYTCIGLMIIN
LALIVRHLRLERISVAFLSALCGIITADFASGLVHWAADTWGSVDIPMIG
KNFLRPFREHHLDPTSITRHDFIETNGDNFMVGIPILGYLAHYFYIRTPS
EIQQHFGWIAYVFLCSIFVAMTNQIHKWSHTYWGLPRWVLLLQSCHIILP
RKHHRIHHVAPHETYFCITTGWLNWPLERIRFWSTFELIIEHFTGLKPRD
DDLKWAKKLT*

IP01723.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:35:26
Subject Length Description Subject Range Query Range Score Percent Strand
Kua-PC 310 CG10723-PC 1..310 1..310 1687 100 Plus
Kua-PD 310 CG10723-PD 1..310 1..310 1687 100 Plus
Kua-PB 310 CG10723-PB 1..310 1..310 1687 100 Plus
Kua-PA 310 CG10723-PA 1..310 1..310 1687 100 Plus