Clone IP01781 Report

Search the DGRC for IP01781

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:17
Well:81
Vector:pOT2
Associated Gene/TranscriptkappaTry-RC
Protein status:IP01781.pep: gold
Preliminary Size:885
Sequenced Size:937

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12388 2005-01-01 Successful iPCR screen
kappaTry 2008-04-29 Release 5.5 accounting
kappaTry 2008-08-15 Release 5.9 accounting
kappaTry 2008-12-18 5.12 accounting

Clone Sequence Records

IP01781.complete Sequence

937 bp (937 high quality bases) assembled on 2006-01-24

GenBank Submission: BT024443

> IP01781.complete
CACACCCGTGCGAATCGATGGAAGGTGCGATGTGCATCCCGCTACTGTTG
TTGGCCATTGGGTTCTCCTCCGTTATTTCAATTTCCGGTCAACCGGAGGG
CAGAATAATTAATGGCACTACGGTAGATATTGCCCGTCATCCATATCTAG
TCTCCCTTCGCTATCGCCGGGATAATGAGTCCAGCTATATGCACGAATGT
GCCGGTGTCATCATCTCGGAACAGGCATTGATCACCAGTGCTCAGTGCCT
CTATGGCTTGCCCGAGGAAACTAAACTTGTGGCTGTGGCCGGAGCAAACA
CCCGCAATGGAACCGATGGATTTATTTACCCAGTAGCCAATTGGACCCAT
CATCCGAACTACGATCCCGTGACAGTTGACAATGATATAGGTGTCCTCCT
TCTGGACACAACCCTCGACCTCACGCTCCTCGGAATAAGCTCAATTGGTA
TCCGCCCGGAGCGTCCTGCAGTGGGTAGACTTGCCACTGTAGCCGGATGG
GGCTACCGGGAGGAGTGGGGCCCCTCCAGCTACAAACTGGAGCAGACCGA
AGTTCCAGTGGTTAGCTCTGAGCAGTGCACACAAATCTACGGAGCTGGCG
AGGTTACCGAGCGGATGATTTGCGCGGGATTCGTAGTTCAAGGAGGCAGT
GATGCCTGCCAAGGCGACACCGGTGGCCCCCTGGTCATCGATGGTCAGCT
GGTGGGTCTGGTGTCCTGGGGACGCGGATGTGCCCGACCCAACTACCCCA
CCGTCTACTGCTACGTGGCCAGCTTTGTGGATTGGATCGAGGAAACCATA
GCAGCTGCTGGAGTGCAATAAACATAGGCATTTTCGCGGCAATCGATACG
CTATCTTTAAGTGGTTACCGTCGGATAGAGCTACCTAATTTAATAATAAA
ACCGTAATCAAACAAACAAAAAAAAAAAAAAAAAAAA

IP01781.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:20:58
Subject Length Description Subject Range Query Range Score Percent Strand
kappaTry-RB 981 kappaTry-RB 65..981 1..917 4585 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:56:33
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 7225252..7226168 917..1 4585 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:32:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11337795..11338713 919..1 4595 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:13:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 11338994..11339912 919..1 4595 100 Minus
Blast to na_te.dros performed on 2019-03-16 05:56:31 has no hits.

IP01781.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:57:23 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 7225252..7226168 1..917 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:15:46 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RA 1..792 30..821 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:36:50 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RB 65..885 1..821 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:03:37 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RC 1..792 30..821 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:11:37 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RA 1..792 30..821 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:09:55 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RC 1..792 30..821 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:08:33 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RA 1..792 30..821 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:36:50 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RB 65..981 1..917 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:37 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RC 21..937 1..917 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:11:38 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RA 1..792 30..821 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:09:55 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
kappaTry-RC 21..937 1..917 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:23 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11337797..11338713 1..917 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:23 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11337797..11338713 1..917 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:57:23 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11337797..11338713 1..917 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:37 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7225302..7226218 1..917 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:00:13 Download gff for IP01781.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11338996..11339912 1..917 100   Minus

IP01781.hyp Sequence

Translation from 2 to 820

> IP01781.hyp
HPCESMEGAMCIPLLLLAIGFSSVISISGQPEGRIINGTTVDIARHPYLV
SLRYRRDNESSYMHECAGVIISEQALITSAQCLYGLPEETKLVAVAGANT
RNGTDGFIYPVANWTHHPNYDPVTVDNDIGVLLLDTTLDLTLLGISSIGI
RPERPAVGRLATVAGWGYREEWGPSSYKLEQTEVPVVSSEQCTQIYGAGE
VTERMICAGFVVQGGSDACQGDTGGPLVIDGQLVGLVSWGRGCARPNYPT
VYCYVASFVDWIEETIAAAGVQ*

IP01781.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:37:07
Subject Length Description Subject Range Query Range Score Percent Strand
kappaTry-PC 263 CG12388-PC 1..263 10..272 1389 100 Plus
etaTry-PA 262 CG12386-PA 6..254 14..262 527 43.8 Plus
CG7829-PA 253 CG7829-PA 9..249 16..266 464 39.4 Plus
zetaTry-PA 280 CG12387-PA 35..278 31..267 456 40.8 Plus
lambdaTry-PA 272 CG12350-PA 33..261 32..267 393 38.2 Plus

IP01781.pep Sequence

Translation from 17 to 820

> IP01781.pep
MEGAMCIPLLLLAIGFSSVISISGQPEGRIINGTTVDIARHPYLVSLRYR
RDNESSYMHECAGVIISEQALITSAQCLYGLPEETKLVAVAGANTRNGTD
GFIYPVANWTHHPNYDPVTVDNDIGVLLLDTTLDLTLLGISSIGIRPERP
AVGRLATVAGWGYREEWGPSSYKLEQTEVPVVSSEQCTQIYGAGEVTERM
ICAGFVVQGGSDACQGDTGGPLVIDGQLVGLVSWGRGCARPNYPTVYCYV
ASFVDWIEETIAAAGVQ*

IP01781.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12407-PA 313 GF12407-PA 53..307 9..263 1085 78.8 Plus
Dana\GF16324-PA 250 GF16324-PA 18..248 21..261 463 40.2 Plus
Dana\GF12405-PA 262 GF12405-PA 26..261 25..261 462 43.3 Plus
Dana\GF12406-PA 285 GF12406-PA 34..282 26..267 426 38.8 Plus
Dana\GF22084-PA 341 GF22084-PA 59..295 29..258 390 37.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:20:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22665-PA 263 GG22665-PA 1..263 5..267 1209 85.6 Plus
Dere\etaTry-PA 258 GG22663-PA 19..258 21..261 498 45 Plus
Dere\zetaTry-PA 281 GG22664-PA 36..279 26..262 429 39.6 Plus
Dere\GG11998-PA 252 GG11998-PA 2..249 1..261 425 36.8 Plus
Dere\GG20193-PA 273 GG20193-PA 34..262 27..262 394 38.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22869-PA 271 GH22869-PA 23..270 19..266 878 68.1 Plus
Dgri\GH22868-PA 268 GH22868-PA 28..265 25..261 500 41.4 Plus
Dgri\GH22923-PA 266 GH22923-PA 28..253 26..260 410 38.3 Plus
Dgri\GH22867-PA 278 GH22867-PA 5..264 4..263 389 37.4 Plus
Dgri\GH13258-PA 254 GH13258-PA 26..249 27..258 374 38.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:52
Subject Length Description Subject Range Query Range Score Percent Strand
kappaTry-PC 263 CG12388-PC 1..263 5..267 1389 100 Plus
etaTry-PA 262 CG12386-PA 6..254 9..257 527 43.8 Plus
CG7829-PA 253 CG7829-PA 9..249 11..261 464 39.4 Plus
zetaTry-PA 280 CG12387-PA 35..278 26..262 456 40.8 Plus
lambdaTry-PA 272 CG12350-PA 33..261 27..262 393 38.2 Plus
CG32755-PA 315 CG32755-PA 6..277 5..263 386 35.7 Plus
CG3355-PA 314 CG3355-PA 75..307 29..262 378 36 Plus
Try29F-PD 267 CG9564-PD 39..261 27..257 376 39.6 Plus
Try29F-PC 267 CG9564-PC 39..261 27..257 376 39.6 Plus
Ser8-PA 260 CG4812-PA 9..253 9..257 374 39.8 Plus
CG18735-PA 364 CG18735-PA 82..313 29..259 370 34.5 Plus
betaTry-PB 253 CG18211-PB 14..249 13..257 369 36.9 Plus
betaTry-PA 253 CG18211-PA 14..249 13..257 369 36.9 Plus
alphaTry-PA 256 CG18444-PA 11..252 10..260 366 36.1 Plus
CG31954-PA 277 CG31954-PA 43..273 22..259 366 38.2 Plus
gammaTry-PA 253 CG30028-PA 14..249 13..257 364 35.7 Plus
CG30025-PA 253 CG30025-PA 14..249 13..257 364 35.7 Plus
deltaTry-PA 253 CG12351-PA 14..249 13..257 364 35.7 Plus
CG30031-PA 253 CG30031-PA 14..249 13..257 364 35.7 Plus
CG8299-PA 260 CG8299-PA 9..258 10..263 364 36.3 Plus
CG14780-PA 302 CG14780-PA 30..271 27..258 350 36.4 Plus
CG6041-PA 308 CG6041-PA 9..269 4..257 350 32.6 Plus
iotaTry-PA 252 CG7754-PA 5..245 3..257 344 36.4 Plus
CG16749-PA 265 CG16749-PA 9..260 9..260 339 32.3 Plus
epsilonTry-PA 256 CG18681-PA 5..252 4..260 337 34.1 Plus
CG4386-PA 372 CG4386-PA 126..355 29..258 334 31.2 Plus
CG17571-PB 258 CG17571-PB 27..254 26..260 333 34.7 Plus
CG17571-PA 258 CG17571-PA 27..254 26..260 333 34.7 Plus
CG4613-PC 374 CG4613-PC 136..362 29..257 327 31.8 Plus
CG4613-PB 374 CG4613-PB 136..362 29..257 327 31.8 Plus
CG9294-PB 352 CG9294-PB 100..334 29..257 322 32.2 Plus
Np-PB 1041 CG34350-PB 794..1039 26..261 321 31.3 Plus
Np-PA 1041 CG34350-PA 794..1039 26..261 321 31.3 Plus
CG33159-PA 257 CG33159-PA 19..256 23..265 320 34.8 Plus
CG11192-PB 279 CG11192-PB 25..267 27..265 319 33.2 Plus
CG32269-PB 332 CG32269-PB 102..330 23..262 318 33.9 Plus
CG32269-PA 332 CG32269-PA 102..330 23..262 318 33.9 Plus
CG12951-PA 265 CG12951-PA 7..258 7..258 317 29.5 Plus
thetaTry-PA 262 CG12385-PA 4..255 5..257 313 33.8 Plus
CG4914-PA 374 CG4914-PA 125..362 27..259 312 32.4 Plus
CG10405-PB 268 CG10405-PB 8..254 7..251 310 33.9 Plus
Corin-PC 1397 CG2105-PC 1099..1348 25..262 310 34.6 Plus
Corin-PB 1397 CG2105-PB 1099..1348 25..262 310 34.6 Plus
CG8172-PD 371 CG8172-PD 125..367 29..262 302 32.3 Plus
CG8172-PE 545 CG8172-PE 299..541 29..262 302 32.3 Plus
CG13430-PB 267 CG13430-PB 27..263 25..261 300 34.7 Plus
CG13430-PA 267 CG13430-PA 27..263 25..261 300 34.7 Plus
CG31267-PA 275 CG31267-PA 13..274 9..266 298 33.1 Plus
CG17239-PB 248 CG17239-PB 13..237 18..257 297 36.1 Plus
CG17239-PA 248 CG17239-PA 13..237 18..257 297 36.1 Plus
CG34458-PA 257 CG34458-PA 10..253 7..259 295 29.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21249-PA 273 GI21249-PA 32..270 26..264 892 68.2 Plus
Dmoj\GI21246-PA 262 GI21246-PA 5..259 11..262 488 42.8 Plus
Dmoj\GI21247-PA 271 GI21247-PA 27..271 21..264 478 41.1 Plus
Dmoj\GI17455-PA 260 GI17455-PA 30..254 25..257 371 37.7 Plus
Dmoj\GI22815-PA 312 GI22815-PA 73..305 29..262 368 34.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17343-PA 200 GL17343-PA 31..197 25..191 668 72.5 Plus
Dper\GL17341-PA 248 GL17341-PA 25..247 27..262 487 44.1 Plus
Dper\GL17342-PA 280 GL17342-PA 35..275 29..262 427 38.4 Plus
Dper\GL13444-PA 259 GL13444-PA 28..251 29..261 415 37.8 Plus
Dper\GL17140-PA 237 GL17140-PA 11..227 37..263 382 39.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24219-PA 273 GA24219-PA 31..273 25..267 985 74.1 Plus
Dpse\GA11598-PA 262 GA11598-PA 25..259 27..262 519 45.6 Plus
Dpse\GA11599-PA 280 GA11599-PA 35..275 29..262 427 38.4 Plus
Dpse\GA20613-PA 259 GA20613-PA 28..257 29..267 415 36.8 Plus
Dpse\GA11574-PA 269 GA11574-PA 32..259 26..263 415 39.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20444-PA 263 GM20444-PA 1..260 5..264 1303 95 Plus
Dsec\GM20442-PA 426 GM20442-PA 179..424 17..263 505 44.4 Plus
Dsec\GM12217-PA 294 GM12217-PA 56..290 17..261 465 40 Plus
Dsec\GM20443-PA 280 GM20443-PA 35..278 26..262 447 40 Plus
Dsec\GM21281-PA 272 GM21281-PA 33..261 27..262 384 36.9 Plus
Dsec\GM20442-PA 426 GM20442-PA 17..183 61..244 187 33.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25911-PA 262 GD25911-PA 1..262 5..267 1252 91.6 Plus
Dsim\GD25909-PA 262 GD25909-PA 19..260 21..263 504 44.7 Plus
Dsim\GD25910-PA 280 GD25910-PA 35..278 26..262 446 40.8 Plus
Dsim\GD15412-PA 260 GD15412-PA 18..253 18..257 383 40.5 Plus
Dsim\GD17644-PA 211 GD17644-PA 15..209 17..221 374 40 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20853-PA 266 GJ20853-PA 4..264 1..265 954 66.4 Plus
Dvir\GJ20851-PA 269 GJ20851-PA 30..267 26..263 472 43.3 Plus
Dvir\GJ20852-PA 267 GJ20852-PA 29..266 25..261 431 39.6 Plus
Dvir\GJ21494-PA 265 GJ21494-PA 4..252 5..260 391 36.8 Plus
Dvir\GJ23363-PA 318 GJ23363-PA 79..311 29..262 380 35 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:20:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19333-PA 263 GK19333-PA 23..261 27..265 906 69 Plus
Dwil\GK19332-PA 264 GK19332-PA 24..260 27..263 475 40.6 Plus
Dwil\GK19456-PA 283 GK19456-PA 21..273 18..262 419 38.8 Plus
Dwil\GK19455-PA 280 GK19455-PA 8..273 10..261 409 38.1 Plus
Dwil\GK19691-PA 259 GK19691-PA 11..246 14..260 403 37.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:20:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\kappaTry-PA 263 GE13020-PA 1..263 5..267 1296 93.5 Plus
Dyak\GE13537-PA 262 GE13537-PA 8..260 7..263 522 45 Plus
Dyak\GE13538-PA 280 GE13538-PA 35..278 26..262 453 40.8 Plus
Dyak\GE10423-PA 253 GE10423-PA 8..253 9..264 441 37.1 Plus
Dyak\GE12880-PA 272 GE12880-PA 4..262 5..263 390 36.9 Plus