IP01862.complete Sequence
1438 bp assembled on 2008-06-09
GenBank Submission: BT033047
> IP01862.complete
TCGGCACGAGGCAGCATGTTGCATCCGAAACTTGGTCGCGTGATGAACGT
GGTCTACTACCATTCCGTTGTCTTCGCCCTAATGAGCACTACCCTAAGGA
TACGCTCCTGCAGGAAATGCCTACGCTTGGAAAAGGTCTCGCGAACTTAC
ACCATCTACAGTTTCTTTGTGGGCATATTCCTGTTTCTAAACTTGTACTT
CATGGTGCCTCGGATCATGGAAGATGGCTACATGAAGTACAACATAGTCC
TGCAGTGGAACTTCTTTGTGATGCTCTTCCTTAGAGCCATCGCTGTGGTG
AGCTGCTATGGAACCCTGTGGCTAAAGCGCCACAAAATCATTCAGCTCTA
TAAATACTCGCTGATATATTGGAAGAGGTTCGGACACATAACGAGGGCCA
TAGTGGACAAGAAAGAACTCCTTGACCTACAAGAGTCCTTGGCCAGAATA
ATGATCCGGAAAATAATATTACTCTATAGTGCTTTTCTGTGCTCCACTGT
GTTGCAGTATCAATTGCTCAGTGTGATTAACCCACAGATTTTCCTGGCTT
TCTGTGCCCGGCTCACGCACTTTCTGCACTTCTTGTGCGTGAAAATGGGT
TTCTTCGGGGTACTGGTTCTACTGAATCATCAATTTTTGGTAATCCATCT
GGCCATAAACGCTCTTCATGGTAGGAAAGCCCGGAAGAAATGGAAAGCTC
TGCGTTCCGTAGCCGCCATGCATCTGAAAACCCTTCGATTAGCCAGAAGG
ATCTTTGACATGTTTGACATCGCTAATGCCACGGTGTTTATCAACATGTT
TATGACCGCTATTAATATCCTTTATCATGCCGTCCAGTACAGCAATAGCA
GCATCAAGTCAAATGGTTGGGGCATCTTATTTGGCAACGGATTGATCGTT
TTCAACTTCTGGGGCACCATGGCGCTGATGGAAATGCTGGATAGTGTGGT
GACCTCCTGCAACAACACTGGCCAGCAACTAAGGCAACTTAGCGATCTAC
CAAAAGTGGGTCCAAAGATGCAAAGGGAGTTGGATGTTTTTACCATGCAG
CTGAGGCAGAATCGGTTGGTCTACAAAATATGCGGAATTGTGGAGCTGGA
CAAACCCGCTTGCCTTAGTTATATTGGCTCCATTCTGAGCAACGTCATTA
TCCTCATGCAGTTCGATTTGAGACGGCAAAGACAACCCATCAATGATCGT
CAATATCTCATCCATTTGATGAAGAACAAAACAAAAGTGTAAAGAAAATC
ATATATCTTATATCTATCTACCTAAATGTTCACCATTTATACACGGTTTT
TTTTTTTACCTTGATATGATACATAAACGTAAATCAATCAAGCTTTCAGA
ACTTTACACGAAAATAGAAAGCTTTCTCGCAGCTTACAGGACTCTCAGTC
ATGGGAGTTTTATAGGAAAAAAAAAAAAAAAAAAAAAA
IP01862.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:05:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gr58b-RA | 1414 | Gr58b-RA | 9..1414 | 11..1416 | 7030 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:01:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 17865006..17866024 | 1029..11 | 4975 | 99.2 | Minus |
chr2R | 21145070 | chr2R | 17864563..17864950 | 1416..1028 | 1850 | 99 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:32:28 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:00:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21978659..21979677 | 1029..11 | 5095 | 100 | Minus |
2R | 25286936 | 2R | 21978214..21978603 | 1417..1028 | 1950 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:00:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 21979858..21980876 | 1029..11 | 5095 | 100 | Minus |
2R | 25260384 | 2R | 21979413..21979802 | 1417..1028 | 1950 | 100 | Minus |
Blast to na_custom.ecoli performed on 2008-06-09 15:34:03 has no hits.
Blast to na_te.dros performed on 2019-03-16 20:00:58 has no hits.
IP01862.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:01:59 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 17864563..17864948 | 1030..1416 | 98 | <- | Minus |
chr2R | 17865006..17866024 | 11..1029 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:15:54 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 1..1227 | 16..1242 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:05:23 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 1..1227 | 16..1242 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:50:41 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 1..1227 | 16..1242 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:13:09 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 1..1227 | 16..1242 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:49:49 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 1..1227 | 16..1242 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:32:33 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 9..1414 | 11..1416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:05:23 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 9..1414 | 11..1416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:50:41 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 1..1406 | 11..1416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:13:10 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 9..1414 | 11..1416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:49:49 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gr58b-RA | 1..1406 | 11..1416 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:01:59 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21978215..21978601 | 1030..1416 | 100 | <- | Minus |
2R | 21978659..21979677 | 11..1029 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:01:59 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21978215..21978601 | 1030..1416 | 100 | <- | Minus |
2R | 21978659..21979677 | 11..1029 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:01:59 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21978215..21978601 | 1030..1416 | 100 | <- | Minus |
2R | 21978659..21979677 | 11..1029 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:50:41 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 17865720..17866106 | 1030..1416 | 100 | <- | Minus |
arm_2R | 17866164..17867182 | 11..1029 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:39:06 Download gff for
IP01862.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21979414..21979800 | 1030..1416 | 100 | <- | Minus |
2R | 21979858..21980876 | 11..1029 | 100 | | Minus |
IP01862.pep Sequence
Translation from 0 to 1241
> IP01862.pep
SARGSMLHPKLGRVMNVVYYHSVVFALMSTTLRIRSCRKCLRLEKVSRTY
TIYSFFVGIFLFLNLYFMVPRIMEDGYMKYNIVLQWNFFVMLFLRAIAVV
SCYGTLWLKRHKIIQLYKYSLIYWKRFGHITRAIVDKKELLDLQESLARI
MIRKIILLYSAFLCSTVLQYQLLSVINPQIFLAFCARLTHFLHFLCVKMG
FFGVLVLLNHQFLVIHLAINALHGRKARKKWKALRSVAAMHLKTLRLARR
IFDMFDIANATVFINMFMTAINILYHAVQYSNSSIKSNGWGILFGNGLIV
FNFWGTMALMEMLDSVVTSCNNTGQQLRQLSDLPKVGPKMQRELDVFTMQ
LRQNRLVYKICGIVELDKPACLSYIGSILSNVIILMQFDLRRQRQPINDR
QYLIHLMKNKTKV*
IP01862.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:54:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF11606-PA | 407 | GF11606-PA | 1..407 | 6..413 | 1376 | 63.2 | Plus |
Dana\GF13281-PA | 389 | GF13281-PA | 25..389 | 42..393 | 346 | 29.8 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:54:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20732-PA | 408 | GG20732-PA | 1..408 | 6..413 | 1838 | 84.1 | Plus |
Dere\GG22153-PA | 395 | GG22153-PA | 32..395 | 48..398 | 295 | 25.3 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:54:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH21352-PA | 402 | GH21352-PA | 12..387 | 17..396 | 767 | 42 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gr58b-PA | 408 | CG13495-PA | 1..408 | 6..413 | 2106 | 100 | Plus |
Gr58a-PA | 395 | CG30396-PA | 32..395 | 48..398 | 347 | 24.3 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:54:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI20768-PA | 396 | GI20768-PA | 1..383 | 6..395 | 669 | 37.4 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:54:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL17503-PA | 391 | GL17503-PA | 1..389 | 6..394 | 1064 | 53.3 | Plus |
Dper\GL16968-PA | 409 | GL16968-PA | 43..402 | 48..391 | 361 | 28.6 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:54:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\Gr58b-PA | 391 | GA12328-PA | 1..389 | 6..394 | 1078 | 53.1 | Plus |
Dpse\Gr58a-PA | 409 | GA15816-PA | 43..402 | 48..391 | 374 | 28.3 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:54:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM15676-PA | 408 | GM15676-PA | 1..408 | 6..413 | 2016 | 92.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:54:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25156-PA | 408 | GD25156-PA | 1..408 | 6..413 | 2031 | 93.1 | Plus |
Dsim\GD11640-PA | 300 | GD11640-PA | 122..300 | 221..398 | 258 | 30.2 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:54:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ20503-PA | 390 | GJ20503-PA | 1..385 | 6..395 | 884 | 44.4 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:54:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK15637-PA | 353 | GK15637-PA | 1..328 | 6..333 | 653 | 41.2 | Plus |
Dwil\GK15940-PA | 395 | GK15940-PA | 39..389 | 50..393 | 326 | 27.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:54:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13664-PA | 407 | GE13664-PA | 1..407 | 6..413 | 1747 | 79.2 | Plus |
Dyak\GE12234-PA | 397 | GE12234-PA | 31..397 | 47..400 | 291 | 26.3 | Plus |
IP01862.hyp Sequence
Translation from 12 to 1241
> IP01862.hyp
SMLHPKLGRVMNVVYYHSVVFALMSTTLRIRSCRKCLRLEKVSRTYTIYS
FFVGIFLFLNLYFMVPRIMEDGYMKYNIVLQWNFFVMLFLRAIAVVSCYG
TLWLKRHKIIQLYKYSLIYWKRFGHITRAIVDKKELLDLQESLARIMIRK
IILLYSAFLCSTVLQYQLLSVINPQIFLAFCARLTHFLHFLCVKMGFFGV
LVLLNHQFLVIHLAINALHGRKARKKWKALRSVAAMHLKTLRLARRIFDM
FDIANATVFINMFMTAINILYHAVQYSNSSIKSNGWGILFGNGLIVFNFW
GTMALMEMLDSVVTSCNNTGQQLRQLSDLPKVGPKMQRELDVFTMQLRQN
RLVYKICGIVELDKPACLSYIGSILSNVIILMQFDLRRQRQPINDRQYLI
HLMKNKTKV*
IP01862.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:38:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gr58b-PA | 408 | CG13495-PA | 1..408 | 2..409 | 2106 | 100 | Plus |
Gr58a-PA | 395 | CG30396-PA | 32..395 | 44..394 | 347 | 24.3 | Plus |