BDGP Sequence Production Resources |
Search the DGRC for IP01956
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 19 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | Tsp42A-RA |
Protein status: | IP01956.pep: gold |
Preliminary Size: | 714 |
Sequenced Size: | 958 |
Gene | Date | Evidence |
---|---|---|
CG14468 | 2005-01-01 | Successful iPCR screen |
Tsp42A | 2008-04-29 | Release 5.5 accounting |
Tsp42A | 2008-08-15 | Release 5.9 accounting |
Tsp42A | 2008-12-18 | 5.12 accounting |
958 bp (958 high quality bases) assembled on 2006-05-24
GenBank Submission: BT025811
> IP01956.complete AGGAATTCGTGTTGCGCAACTGACGCGGCGCTTTCATCAACTGGAGCCTA ACCCGGCGAAATGGCTAATCCGTTTCGCTGGTGTCGAGTGTCGCACGACT GCGTGTTCCAGATTAATGTGGTTCTGGTGGTGGTCGGAGTGATCTTTCTG CTTGACGTGCTCAGCCACCTTTATCTGAAGGCGGTCATGTTTCCAGGCCT TCGTCTATACCCGGTAGCCTTGCGCCCCTGGCTCTTTTGGGTGCGCGCTT TGACAATGGTTGCCTACATTTTGAACGCTGTTCTTGGGATTCACATGGCC CGACAACCCACCGTCTTGAAGTACGCTGGCTATATGCTCGTTGGAAGCGT GGTGTTGCTGTACACAATAAGCATCGGAGTGACTCGCTTCATGTACCGCA AAAGATTCGAGTTCTTTGCCGAGATGCTGGTGCTGCAGATGTGGGTGAGA GATAGACTTGGCAAGGTTGAAGTAGAGTTCGAGTGCTGCGGAAGGTCCAG CGTAGTTGACTACCAGACAGCATCGAGCAACCGCACCTGGCCCATTGGCT CTTGCTGCGGGAAGCAGAACTGCACCGGCTGCACTGCGAAGCTTAGCCAG TACCTGTGGACTATCGAGATGGATGTGGCAAGGGATAATATTATCGTATC CGTTCTCTTGTTTGTGGCGATGATCGTCATGGTTTTACACTTTAAAGATG TGCAATCGCTCGACGACACTAGTGATGTGGATGAGTCTTCAGAACTGGTA GACGACTCGGACGCCAAAGAATAAGCCCCATCCCATCTAGTCGTGCCGGT CCCAATTGCTTTTATATGGTCCCCCTCATTCAAGTACATAAATACTATTT TGAATGTGATATTACCCATGCCTTTAGGGCATATACAGTGTATATTTATT TTTTTGCGACAAAGGTAAATACACTGATTAGATCTGAAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tsp42A-RA | 936 | Tsp42A-RA | 1..936 | 1..936 | 4680 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 1682801..1683736 | 1..936 | 4665 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 5795413..5796350 | 1..938 | 4690 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 5796612..5797549 | 1..938 | 4690 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 1682801..1683736 | 1..936 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..714 | 61..774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..714 | 61..774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..714 | 61..774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..714 | 61..774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..714 | 61..774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..714 | 61..774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..936 | 1..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..936 | 1..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..714 | 61..774 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tsp42A-RA | 1..936 | 1..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5795413..5796348 | 1..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5795413..5796348 | 1..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5795413..5796348 | 1..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 1682918..1683853 | 1..936 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5796612..5797547 | 1..936 | 100 | Plus |
Translation from 60 to 773
> IP01956.hyp MANPFRWCRVSHDCVFQINVVLVVVGVIFLLDVLSHLYLKAVMFPGLRLY PVALRPWLFWVRALTMVAYILNAVLGIHMARQPTVLKYAGYMLVGSVVLL YTISIGVTRFMYRKRFEFFAEMLVLQMWVRDRLGKVEVEFECCGRSSVVD YQTASSNRTWPIGSCCGKQNCTGCTAKLSQYLWTIEMDVARDNIIVSVLL FVAMIVMVLHFKDVQSLDDTSDVDESSELVDDSDAKE*
Translation from 60 to 773
> IP01956.pep MANPFRWCRVSHDCVFQINVVLVVVGVIFLLDVLSHLYLKAVMFPGLRLY PVALRPWLFWVRALTMVAYILNAVLGIHMARQPTVLKYAGYMLVGSVVLL YTISIGVTRFMYRKRFEFFAEMLVLQMWVRDRLGKVEVEFECCGRSSVVD YQTASSNRTWPIGSCCGKQNCTGCTAKLSQYLWTIEMDVARDNIIVSVLL FVAMIVMVLHFKDVQSLDDTSDVDESSELVDDSDAKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23186-PA | 259 | GF23186-PA | 1..215 | 1..215 | 794 | 64.2 | Plus |
Dana\GF13834-PA | 259 | GF13834-PA | 1..215 | 1..215 | 780 | 63.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23182-PA | 238 | GG23182-PA | 1..238 | 1..237 | 1090 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20419-PA | 230 | GH20419-PA | 7..218 | 8..219 | 424 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tsp42A-PB | 237 | CG14468-PB | 1..237 | 1..237 | 1236 | 100 | Plus |
Tsp42A-PA | 237 | CG14468-PA | 1..237 | 1..237 | 1236 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19602-PA | 263 | GI19602-PA | 10..231 | 10..233 | 329 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20055-PA | 259 | GL20055-PA | 6..224 | 6..222 | 527 | 48.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13005-PA | 259 | GA13005-PA | 6..224 | 6..222 | 509 | 47.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16522-PA | 237 | GM16522-PA | 1..237 | 1..237 | 1150 | 93.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10386-PA | 237 | GD10386-PA | 1..237 | 1..237 | 1162 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18411-PA | 249 | GJ18411-PA | 1..218 | 1..219 | 414 | 35 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21761-PA | 246 | GK21761-PA | 5..220 | 6..219 | 520 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15282-PA | 238 | GE15282-PA | 1..238 | 1..237 | 1133 | 89.5 | Plus |