BDGP Sequence Production Resources |
Search the DGRC for IP02091
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 20 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | Or42a-RA |
Protein status: | IP02091.pep: gold |
Preliminary Size: | 1221 |
Sequenced Size: | 1300 |
Gene | Date | Evidence |
---|---|---|
CG17250 | 2005-01-01 | Successful iPCR screen |
Or42a | 2008-04-29 | Release 5.5 accounting |
Or42a | 2008-08-15 | Release 5.9 accounting |
Or42a | 2008-12-18 | 5.12 accounting |
1300 bp (1300 high quality bases) assembled on 2006-01-20
GenBank Submission: BT024437
> IP02091.complete CACTATGGATCTGCGAAGGTGGTTTCCGACCTTGTACACCCAGTCGAAGG ATTCGCCAGTTCGCTCCCGAGACGCGACCCTGTACCTCCTACGCTGCGTC TTCTTAATGGGCGTCCGCAAGCCACCTGCCAAGTTTTTCGTGGCCTACGT GCTCTGGTCCTTCGCACTGAATTTCTGCTCAACATTTTATCAGCCAATTG GCTTTCTCACAGGCTATATAAGCCATTTATCAGAGTTCTCCCCGGGAGAG TTTCTAACTTCGCTGCAGGTGGCCTTTAATGCTTGGTCCTGCTCTACAAA AGTCCTGATAGTGTGGGCACTAGTTAAGCGCTTTGACGAGGCTAATAACC TTCTCGACGAGATGGATAGGCGTATCACAGACCCCGGAGAGCGTCTTCAG ATTCATCGCGCTGTCTCCCTCAGTAACCGTATATTCTTCTTTTTCATGGC AGTCTACATGGTTTATGCCACTAATACGTTTCTGTCGGCGATCTTCATTG GAAGGCCACCGTACCAAAATTACTACCCTTTTCTGGACTGGCGATCTAGC ACTCTGCATCTAGCTCTGCAGGCCGGTCTGGAATACTTCGCCATGGCTGG CGCCTGCTTCCAGGACGTTTGCGTTGATTGCTACCCAGTCAATTTCGTTT TGGTCCTGCGTGCCCACATGTCGATCTTCGCGGAGCGCCTTCGACGTTTG GGAACTTATCCTTATGAAAGCCAGGAGCAGAAATATGAACGATTGGTTCA GTGCATACAAGATCACAAAGTAATTTTGCGATTTGTTGACTGCCTGCGTC CTGTTATTTCTGGTACCATCTTCGTGCAATTCTTGGTTGTGGGGTTGGTG CTGGGCTTTACCCTAATTAACATTGTCCTGTTCGCCAACTTGGGATCGGC CATCGCAGCGCTCTCGTTTATGGCCGCAGTGCTTCTAGAGACGACTCCCT TCTGCATATTGTGCAATTATCTCACAGAAGACTGCTACAAGCTGGCCGAT GCCCTGTTTCAGTCAAACTGGATTGATGAGGAGAAACGATACCAAAAGAC ACTCATGTACTTCCTACAGAAACTGCAGCAGCCTATAACCTTCATGGCTA TGAACGTGTTTCCAATATCTGTGGGAACTAACATCAGTGTCACAAAATTT TCGTTCTCCGTCTTTACTCTCGTAAAACAAATGAACATATCTGAGAAACT TGCCAAATCTGAAATGGAAGAGTGAAAAAGTTTATTCGAATTTAAAATCA CACATGAAAGAAATTAAAGTACACGGTAATAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 1679575..1680354 | 780..1 | 3900 | 100 | Minus |
chr2R | 21145070 | chr2R | 1679030..1679390 | 1140..780 | 1805 | 100 | Minus |
chr2R | 21145070 | chr2R | 1678828..1678969 | 1280..1139 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 5792188..5792967 | 780..1 | 3900 | 100 | Minus |
2R | 25286936 | 2R | 5791643..5792003 | 1140..780 | 1805 | 100 | Minus |
2R | 25286936 | 2R | 5791437..5791582 | 1284..1139 | 730 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 5793387..5794166 | 780..1 | 3900 | 100 | Minus |
2R | 25260384 | 2R | 5792842..5793202 | 1140..780 | 1805 | 100 | Minus |
2R | 25260384 | 2R | 5792636..5792781 | 1284..1139 | 730 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 3960..4048 | 1171..1261 | 117 | 62 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 1678828..1678969 | 1139..1280 | 100 | <- | Minus |
chr2R | 1679032..1679389 | 781..1138 | 100 | <- | Minus |
chr2R | 1679575..1680354 | 1..780 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1221 | 5..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1221 | 5..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1221 | 5..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1221 | 5..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1221 | 5..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1221 | 5..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1280 | 1..1280 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1280 | 1..1280 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1221 | 5..1225 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Or42a-RA | 1..1280 | 1..1280 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5791441..5791582 | 1139..1280 | 100 | <- | Minus |
2R | 5791645..5792002 | 781..1138 | 100 | <- | Minus |
2R | 5792188..5792967 | 1..780 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5791441..5791582 | 1139..1280 | 100 | <- | Minus |
2R | 5791645..5792002 | 781..1138 | 100 | <- | Minus |
2R | 5792188..5792967 | 1..780 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5791441..5791582 | 1139..1280 | 100 | <- | Minus |
2R | 5791645..5792002 | 781..1138 | 100 | <- | Minus |
2R | 5792188..5792967 | 1..780 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 1678946..1679087 | 1139..1280 | 100 | <- | Minus |
arm_2R | 1679150..1679507 | 781..1138 | 100 | <- | Minus |
arm_2R | 1679693..1680472 | 1..780 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 5793387..5794166 | 1..780 | 100 | Minus | |
2R | 5792844..5793201 | 781..1138 | 100 | <- | Minus |
2R | 5792640..5792781 | 1139..1280 | 100 | <- | Minus |
Translation from 0 to 1224
> IP02091.hyp TMDLRRWFPTLYTQSKDSPVRSRDATLYLLRCVFLMGVRKPPAKFFVAYV LWSFALNFCSTFYQPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTK VLIVWALVKRFDEANNLLDEMDRRITDPGERLQIHRAVSLSNRIFFFFMA VYMVYATNTFLSAIFIGRPPYQNYYPFLDWRSSTLHLALQAGLEYFAMAG ACFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQ CIQDHKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSA IAALSFMAAVLLETTPFCILCNYLTEDCYKLADALFQSNWIDEEKRYQKT LMYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVKQMNISEKL AKSEMEE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Or42a-PA | 406 | CG17250-PA | 1..406 | 2..407 | 2116 | 100 | Plus |
Or42b-PA | 399 | CG12754-PA | 16..395 | 21..399 | 955 | 47.9 | Plus |
Or59b-PA | 398 | CG3569-PA | 16..396 | 20..399 | 845 | 42 | Plus |
Or43b-PA | 403 | CG17853-PA | 5..403 | 8..404 | 753 | 36.8 | Plus |
Or22a-PA | 397 | CG12193-PA | 2..395 | 4..399 | 738 | 37.3 | Plus |
Translation from 4 to 1224
> IP02091.pep MDLRRWFPTLYTQSKDSPVRSRDATLYLLRCVFLMGVRKPPAKFFVAYVL WSFALNFCSTFYQPIGFLTGYISHLSEFSPGEFLTSLQVAFNAWSCSTKV LIVWALVKRFDEANNLLDEMDRRITDPGERLQIHRAVSLSNRIFFFFMAV YMVYATNTFLSAIFIGRPPYQNYYPFLDWRSSTLHLALQAGLEYFAMAGA CFQDVCVDCYPVNFVLVLRAHMSIFAERLRRLGTYPYESQEQKYERLVQC IQDHKVILRFVDCLRPVISGTIFVQFLVVGLVLGFTLINIVLFANLGSAI AALSFMAAVLLETTPFCILCNYLTEDCYKLADALFQSNWIDEEKRYQKTL MYFLQKLQQPITFMAMNVFPISVGTNISVTKFSFSVFTLVKQMNISEKLA KSEMEE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11032-PA | 407 | GF11032-PA | 4..407 | 3..406 | 1917 | 87.6 | Plus |
Dana\GF13833-PA | 399 | GF13833-PA | 15..398 | 19..401 | 983 | 47.7 | Plus |
Dana\GF11847-PA | 398 | GF11847-PA | 16..396 | 19..398 | 882 | 43.7 | Plus |
Dana\GF11845-PA | 410 | GF11845-PA | 16..398 | 19..398 | 788 | 39.9 | Plus |
Dana\GF11232-PA | 403 | GF11232-PA | 8..403 | 10..403 | 730 | 37 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10847-PA | 406 | GG10847-PA | 1..406 | 1..406 | 2001 | 92.1 | Plus |
Dere\GG10846-PA | 399 | GG10846-PA | 16..395 | 20..398 | 974 | 48.4 | Plus |
Dere\GG20029-PA | 398 | GG20029-PA | 16..396 | 19..398 | 862 | 42.9 | Plus |
Dere\GG20028-PA | 410 | GG20028-PA | 1..398 | 3..398 | 784 | 37.9 | Plus |
Dere\GG24797-PA | 397 | GG24797-PA | 5..395 | 10..398 | 720 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21457-PA | 405 | GH21457-PA | 1..403 | 1..403 | 1524 | 69 | Plus |
Dgri\GH20416-PA | 399 | GH20416-PA | 15..395 | 19..398 | 951 | 47.5 | Plus |
Dgri\GH20413-PA | 399 | GH20413-PA | 15..395 | 19..398 | 939 | 45.8 | Plus |
Dgri\GH20412-PA | 399 | GH20412-PA | 15..395 | 19..398 | 929 | 45.5 | Plus |
Dgri\GH24321-PA | 399 | GH24321-PA | 15..396 | 19..399 | 895 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Or42a-PA | 406 | CG17250-PA | 1..406 | 1..406 | 2116 | 100 | Plus |
Or42b-PA | 399 | CG12754-PA | 16..395 | 20..398 | 955 | 47.9 | Plus |
Or59b-PA | 398 | CG3569-PA | 16..396 | 19..398 | 845 | 42 | Plus |
Or43b-PA | 403 | CG17853-PA | 5..403 | 7..403 | 753 | 36.8 | Plus |
Or22b-PA | 397 | CG4231-PA | 2..395 | 3..398 | 738 | 37.8 | Plus |
Or22a-PA | 397 | CG12193-PA | 2..395 | 3..398 | 738 | 37.3 | Plus |
Or59c-PA | 411 | CG17226-PA | 5..399 | 6..398 | 718 | 36.2 | Plus |
Or98a-PA | 397 | CG5540-PA | 17..397 | 21..402 | 686 | 35.3 | Plus |
Or85a-PA | 397 | CG7454-PA | 16..396 | 20..401 | 683 | 35.2 | Plus |
Or7a-PA | 413 | CG10759-PA | 9..412 | 14..402 | 619 | 33.8 | Plus |
Or2a-PA | 397 | CG3206-PA | 3..393 | 13..390 | 314 | 24.7 | Plus |
Or23a-PA | 379 | CG9880-PA | 33..371 | 51..390 | 285 | 23.4 | Plus |
Or33a-PA | 378 | CG16960-PA | 66..378 | 86..395 | 266 | 24.3 | Plus |
Or33b-PA | 379 | CG16961-PA | 28..378 | 42..393 | 258 | 23 | Plus |
Or59a-PA | 379 | CG9820-PA | 36..377 | 48..393 | 249 | 25.2 | Plus |
Or19a-PB | 387 | CG18859-PB | 4..381 | 17..393 | 214 | 23.1 | Plus |
Or19b-PA | 387 | CG32825-PA | 4..381 | 17..393 | 210 | 22.9 | Plus |
Or33c-PA | 384 | CG5006-PA | 60..378 | 79..390 | 207 | 23.5 | Plus |
Or43a-PA | 376 | CG1854-PA | 200..371 | 219..391 | 188 | 23.1 | Plus |
Or30a-PA | 377 | CG13106-PA | 153..375 | 169..393 | 171 | 20.4 | Plus |
Or71a-PB | 378 | CG17871-PB | 125..377 | 141..394 | 156 | 23.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19935-PA | 408 | GI19935-PA | 1..408 | 1..406 | 1452 | 68.1 | Plus |
Dmoj\GI19947-PA | 413 | GI19947-PA | 1..402 | 1..402 | 1427 | 62.9 | Plus |
Dmoj\GI19601-PA | 399 | GI19601-PA | 2..395 | 10..398 | 953 | 47 | Plus |
Dmoj\GI19019-PA | 399 | GI19019-PA | 17..397 | 19..398 | 862 | 42.3 | Plus |
Dmoj\GI17082-PA | 400 | GI17082-PA | 2..397 | 3..398 | 796 | 39.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20053-PA | 407 | GL20053-PA | 1..405 | 1..405 | 1867 | 84.7 | Plus |
Dper\GL20052-PA | 409 | GL20052-PA | 1..405 | 1..405 | 1760 | 79.5 | Plus |
Dper\GL20054-PA | 399 | GL20054-PA | 15..395 | 19..398 | 960 | 48.2 | Plus |
Dper\GL17559-PA | 398 | GL17559-PA | 16..396 | 19..398 | 863 | 43.2 | Plus |
Dper\GL10387-PA | 407 | GL10387-PA | 2..397 | 6..399 | 778 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Or42a2-PA | 407 | GA14414-PA | 1..405 | 1..405 | 1874 | 85.2 | Plus |
Dpse\Or42a1-PA | 409 | GA24267-PA | 1..405 | 1..405 | 1777 | 80.7 | Plus |
Dpse\Or42b-PA | 399 | GA11791-PA | 15..395 | 19..398 | 966 | 47.8 | Plus |
Dpse\Or59b-PA | 398 | GA17527-PA | 16..396 | 19..398 | 861 | 42.8 | Plus |
Dpse\Or43b-PA | 407 | GA14700-PA | 2..397 | 6..399 | 777 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16497-PA | 406 | GM16497-PA | 1..406 | 1..406 | 2114 | 96.8 | Plus |
Dsec\GM16496-PA | 399 | GM16496-PA | 16..395 | 20..398 | 978 | 48.7 | Plus |
Dsec\GM15541-PA | 398 | GM15541-PA | 16..396 | 19..398 | 855 | 42.7 | Plus |
Dsec\GM15540-PA | 411 | GM15540-PA | 6..399 | 7..398 | 743 | 37.1 | Plus |
Dsec\GM20747-PA | 403 | GM20747-PA | 5..403 | 7..403 | 740 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10348-PA | 406 | GD10348-PA | 1..406 | 1..406 | 2145 | 98 | Plus |
Dsim\GD10347-PA | 422 | GD10347-PA | 39..418 | 20..398 | 973 | 48.4 | Plus |
Dsim\GD25045-PA | 398 | GD25045-PA | 16..396 | 19..398 | 855 | 42.7 | Plus |
Dsim\GD25044-PA | 411 | GD25044-PA | 6..399 | 7..398 | 748 | 37.1 | Plus |
Dsim\GD10213-PA | 403 | GD10213-PA | 5..403 | 7..403 | 744 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17804-PA | 412 | GJ17804-PA | 1..402 | 1..402 | 1522 | 68.4 | Plus |
Dvir\GJ15103-PA | 409 | GJ15103-PA | 1..407 | 1..406 | 1440 | 67.1 | Plus |
Dvir\GJ15102-PA | 387 | GJ15102-PA | 1..387 | 1..406 | 1281 | 62.2 | Plus |
Dvir\GJ18409-PA | 400 | GJ18409-PA | 15..396 | 19..398 | 966 | 48.4 | Plus |
Dvir\GJ10682-PA | 400 | GJ10682-PA | 16..398 | 17..398 | 864 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21762-PA | 410 | GK21762-PA | 1..405 | 1..405 | 1803 | 81.5 | Plus |
Dwil\GK21759-PA | 399 | GK21759-PA | 4..395 | 2..398 | 955 | 47.4 | Plus |
Dwil\GK23054-PA | 398 | GK23054-PA | 16..396 | 19..398 | 868 | 43.2 | Plus |
Dwil\GK23053-PA | 404 | GK23053-PA | 5..404 | 10..403 | 849 | 40.1 | Plus |
Dwil\GK14943-PA | 400 | GK14943-PA | 6..400 | 7..400 | 802 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11311-PA | 406 | GE11311-PA | 1..406 | 1..406 | 2039 | 93.3 | Plus |
Dyak\GE19440-PA | 399 | GE19440-PA | 16..395 | 20..398 | 979 | 48.7 | Plus |
Dyak\GE11565-PA | 398 | GE11565-PA | 16..396 | 19..398 | 858 | 42.7 | Plus |
Dyak\GE11564-PA | 411 | GE11564-PA | 6..399 | 7..398 | 753 | 37.2 | Plus |
Dyak\GE17626-PA | 397 | GE17626-PA | 2..395 | 3..398 | 730 | 37.3 | Plus |