Clone IP02096 Report

Search the DGRC for IP02096

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:20
Well:96
Vector:pOT2
Associated Gene/TranscriptCG5793-RB
Protein status:IP02096.pep: gold
Preliminary Size:591
Sequenced Size:2201

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17284 2005-01-01 Successful iPCR screen
CG5793 2008-04-29 Release 5.5 accounting
CG5793 2008-08-15 Release 5.9 accounting
CG5793 2008-12-18 5.12 accounting

Clone Sequence Records

IP02096.complete Sequence

2201 bp (2201 high quality bases) assembled on 2006-05-24

GenBank Submission: BT025890

> IP02096.complete
AATACACATTTTTTTTCAAATTCACAGTGCAACTAACTCAAATCCTCAGG
ATGGCGTGCCAAAACCAAAATGCCGCCAACTTCTTGAGCAATGGCAAGAA
AATTGTGGGGGTGGCTCTTAATTACATGGACGTTGTGCTGGCCAGGAACG
TTCCCGTGCCCAAGGAGCCGCTCGTCTTCCTCAAGCCCACATCTTCGTAC
CTCCAGGAGGGTCAGCCCATTGTGTTACCAAAAGTCTTTACCAAGGTGGC
ATATGAAGTGGAACTAGGCGTGGTGATTGGAAAGCCCTGCAAGAACGTAT
CCAAGGCAGATGCCATGAGCTATGTGGCAGGATACTGCCTGGCTTTGGAT
CTAACTGCCCAGTGCAATTTGGGACCAGCTCGGGCGGCCGGTCATCCGTG
GACCTTGGGCAAGGGATTTGATACTTCTACGCCCGTGTCCCAGTTTATAC
CCATCGAAAAAGTGACGGACCCGCACAACTTGCCGCTTTGGCTCACCGTC
AATGGAGACCTTAAGCAAAACGGGTGCACTGCAGACTTAATATTCAAGGT
GCCCGACATCATTTCCTACGTGTCCAAGTACATGACCCTGGAGGCCAACG
ATCTGATCCTTACCGGAACGCCCAATGGTGCCGATGCGTTCAAGGCAGGC
GATGTAATTCAGTGTGGAATGGCCGATCTCGCTAAATTGACCTTCCAAGT
GGAGGCTGAATAAAAGTGAAGAATTTAATTTTGATGCTATATTCGGATAT
AATTGGATATGTGCAATGGCTATTTCTTCTTATTACTGGCCACATCATCA
CAGGCAACCAAATATTTCCACATCGCTGTGCAATCGCTGGTGTTTTTCCA
TTTGCTGGTCGGGCAGTTGATGTAGACCTTTTCCATGACGCAGGCCAGCA
AGGTGGCAGGATAGAAGTCGCAGTCGCCCTTCTTGGGCATCCATTGGAAC
TCCTGCACCCGCTTCCTAGCTATTTAGAATTAACCATTATTAAGTAGAAA
AAAACTTTCGTATGCTAACTCACCGTAGTCCGTGCAACTATTGAGGCTCT
TCAACATCAGTTGCGACATATTCGGATCGTTTTTGTAGCGTTGCTGATAG
CTCTTCTGCAATGCCTGGGTATTAACAGTGCCATTGCTCAACAAGAATCC
ATTGGTCCTGAAGGAGCACTCCGCAATACACTGAGGATTACACGTTTCCC
AAGAGTAAAGCCAGTTTTAAAATGATATATTTTAGAGCGATACTTACTGC
ATGCAAAGCCACTTTATCCGACTTAAGATTGCGCACTTCCCATTGCCAAC
GGCTACACCCCCGTGTTGGATTGCCACACCGCTCACATTGCTTGCAAGTT
CGCTGAGATCAAGGAGAAGGTCGACCGTCGTTCCGGCAAGACCACCGAGG
AGAACCCCAAGTTCATCAAGTCTGGCGATGCTGCCATCGTCAACCTGGTG
CCCTCTAAGCCCCTGTGCGTGGAGGCCTTCCAGGAGTTCCCCCCTCTGGG
TCGCTTCGCTGTGCGTGACATGAGGCAGACCGTGGCTGTCGGTGTCATTA
AGGCTGTCAACTTCAAGGATGCCTCCGGTGGCAAGGTCACCAAGGCCGCC
GAGAAGGCCACCAAGGGCAAGAAGTAGCTGGTTTGCTTCCACTCAACAAC
AACAACAACACGCAGTAGTAGCAGCAACAACAAGCATATAACCAACATCA
TAATGCAGCCAACAACACCACTCAATAATACCAGCAACAGCAGCAGCGAA
CACAATAGTAGTATAACACCAACACCTGTCCTGCGCAAGATGACCGATAA
GATGATGTTTCAGCAGAAGCATAAGTTTAATTTCTTCCATCGAAAGGAGT
TTCGACGGATACGAATGCTAAATGCAGACGAGGCCGCCTAAATTGGGAAA
CGGTGGATCCCAAGGATAAGAGTGCACACTGGGAAAACACTTGCATTTAT
GCATCCACTCCTCATCCACTTCCCCGTCGATCTTTAGTTTACTAAATATG
GTATGATGCACGGAGTTGACTTCGTTTTATCATATCATATATAGGAATCC
TCTGTAGCATTTATGATATCGTTTAAATTAACCTTTATACTTTGATATGT
ATCATTTATCTTACCCTACTTTTGCACACACTACTTTGTACACAAGAAAA
GAACCAGAATAGAAGCGATAACTATATTTACAAAAAAAAAAAAAAAAAAA
A

IP02096.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:17:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG5793.b 1188 CG5793.b 185..1188 1..1004 5005 99.9 Plus
Ef1alpha48D-RA 2503 Ef1alpha48D-RA 1319..2222 1292..2195 4505 99.8 Plus
Ef1alpha48D-RB 2048 Ef1alpha48D-RB 1159..2048 1292..2181 4450 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:46:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 16952404..16953321 374..1291 4470 99.1 Plus
chr2R 21145070 chr2R 7781903..7782792 1292..2181 4450 100 Plus
chr3R 27901430 chr3R 16952196..16952344 224..372 730 99.3 Plus
chr3R 27901430 chr3R 16951779..16951906 1..128 625 99.2 Plus
chr3R 27901430 chr3R 27564291..27564604 1295..1608 610 79.6 Plus
chr3R 27901430 chr3R 16951971..16952067 128..224 485 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:33:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:46:30
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21128551..21129471 371..1291 4605 100 Plus
2R 25286936 2R 11894631..11895534 1292..2195 4505 99.9 Plus
3R 32079331 3R 21128346..21128494 224..372 745 100 Plus
3R 32079331 3R 21127928..21128055 1..128 625 99.2 Plus
3R 32079331 3R 31741940..31742253 1295..1608 610 79.6 Plus
3R 32079331 3R 21128121..21128217 128..224 485 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 20869382..20870302 371..1291 4605 100 Plus
2R 25260384 2R 11895830..11896733 1292..2195 4505 99.8 Plus
3R 31820162 3R 20869177..20869325 224..372 745 100 Plus
3R 31820162 3R 20868759..20868886 1..128 625 99.2 Plus
3R 31820162 3R 31482771..31483039 1295..1563 580 81 Plus
3R 31820162 3R 20868952..20869048 128..224 485 100 Plus
Blast to na_te.dros performed 2019-03-16 07:46:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6702..6891 1626..1821 232 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6788..6917 1644..1776 224 68.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2431 1644..1774 198 66.7 Plus
roo 9092 roo DM_ROO 9092bp 1057..1153 1656..1755 186 71.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1638 1672..1799 164 64.6 Plus
BS 5142 BS BS 5142bp 1982..2187 1619..1830 155 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2435 1674..1803 134 65.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2729..2843 1672..1789 131 63.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6724..6799 1705..1778 131 72.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2304..2383 1707..1790 130 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..6814 1691..1778 128 66.7 Plus

IP02096.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:47:29 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 16951779..16951905 1..127 99 -> Plus
chr3R 16951971..16952067 128..224 100 -> Plus
chr3R 16952197..16952343 225..371 99 -> Plus
chr3R 16952402..16953329 372..1299 98 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:16:46 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
CG5793-RA 2..687 28..713 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:30:22 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
CG5793-RC 2..687 28..713 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:47:26 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
CG5793-RD 1..663 51..713 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:01:53 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
CG5793-RA 2..687 28..713 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:38:52 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
CG5793-RD 1..663 51..713 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:01:52 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
Ef1alpha48D-RB 1159..2052 1288..2181 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:30:22 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
CG5793-RB 6..1304 1..1299 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:47:26 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
CG5793-RE 199..1479 20..1299 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:01:53 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
Ef1alpha48D-RB 1159..2052 1288..2181 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:38:52 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
CG5793-RE 199..1479 20..1299 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:47:29 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21128121..21128217 128..224 100 -> Plus
3R 21128347..21128493 225..371 100 -> Plus
3R 21127928..21128054 1..127 99 -> Plus
3R 21128552..21129479 372..1299 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:47:29 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21128121..21128217 128..224 100 -> Plus
3R 21128347..21128493 225..371 100 -> Plus
3R 21127928..21128054 1..127 99 -> Plus
3R 21128552..21129479 372..1299 99 == Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:47:29 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21128121..21128217 128..224 100 -> Plus
3R 21128347..21128493 225..371 100 -> Plus
3R 21127928..21128054 1..127 99 -> Plus
3R 21128552..21129479 372..1299 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:47:26 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16953650..16953776 1..127 99 -> Plus
arm_3R 16953843..16953939 128..224 100 -> Plus
arm_3R 16954069..16954215 225..371 100 -> Plus
arm_3R 16954274..16955201 372..1299 99 == Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:55:58 Download gff for IP02096.complete
Subject Subject Range Query Range Percent Splice Strand
3R 20868759..20868885 1..127 99 -> Plus
3R 20868952..20869048 128..224 100 -> Plus
3R 20869178..20869324 225..371 100 -> Plus
3R 20869383..20870310 372..1299 99 == Plus

IP02096.hyp Sequence

Translation from 2 to 712

> IP02096.hyp
YTFFFKFTVQLTQILRMACQNQNAANFLSNGKKIVGVALNYMDVVLARNV
PVPKEPLVFLKPTSSYLQEGQPIVLPKVFTKVAYEVELGVVIGKPCKNVS
KADAMSYVAGYCLALDLTAQCNLGPARAAGHPWTLGKGFDTSTPVSQFIP
IEKVTDPHNLPLWLTVNGDLKQNGCTADLIFKVPDIISYVSKYMTLEAND
LILTGTPNGADAFKAGDVIQCGMADLAKLTFQVEAE*

IP02096.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:44:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG5793-PB 220 CG5793-PB 1..220 17..236 1149 100 Plus
CG5793-PE 220 CG5793-PE 1..220 17..236 1149 100 Plus
CG5793-PD 220 CG5793-PD 1..220 17..236 1149 100 Plus
CG6028-PA 293 CG6028-PA 79..292 28..235 309 36.6 Plus
CG11251-PA 338 CG11251-PA 128..333 28..233 249 31.3 Plus

IP02096.pep Sequence

Translation from 2 to 712

> IP02096.pep
YTFFFKFTVQLTQILRMACQNQNAANFLSNGKKIVGVALNYMDVVLARNV
PVPKEPLVFLKPTSSYLQEGQPIVLPKVFTKVAYEVELGVVIGKPCKNVS
KADAMSYVAGYCLALDLTAQCNLGPARAAGHPWTLGKGFDTSTPVSQFIP
IEKVTDPHNLPLWLTVNGDLKQNGCTADLIFKVPDIISYVSKYMTLEAND
LILTGTPNGADAFKAGDVIQCGMADLAKLTFQVEAE*

IP02096.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:55:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16499-PA 221 GF16499-PA 3..221 18..236 990 84.5 Plus
Dana\GF16951-PA 288 GF16951-PA 74..287 28..235 287 35.5 Plus
Dana\GF10417-PA 373 GF10417-PA 134..339 33..236 270 32.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24388-PA 220 GG24388-PA 1..220 17..236 1090 93.2 Plus
Dere\GG12544-PA 288 GG12544-PA 74..287 28..235 301 37.3 Plus
Dere\GG13782-PA 339 GG13782-PA 133..333 33..233 254 31.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17291-PA 221 GH17291-PA 1..221 17..236 891 75.1 Plus
Dgri\GH19847-PA 288 GH19847-PA 74..287 28..235 311 36.9 Plus
Dgri\GH20953-PA 336 GH20953-PA 126..331 33..233 308 37.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG5793-PB 220 CG5793-PB 1..220 17..236 1149 100 Plus
CG5793-PE 220 CG5793-PE 1..220 17..236 1149 100 Plus
CG5793-PD 220 CG5793-PD 1..220 17..236 1149 100 Plus
CG6028-PA 293 CG6028-PA 79..292 28..235 309 36.6 Plus
CG11251-PA 338 CG11251-PA 128..333 28..233 249 31.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:55:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23871-PA 223 GI23871-PA 1..221 17..236 886 75.1 Plus
Dmoj\GI22296-PA 297 GI22296-PA 79..292 28..235 316 37.8 Plus
Dmoj\GI10452-PA 341 GI10452-PA 131..336 33..233 303 38.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:55:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21789-PA 220 GL21789-PA 1..220 17..236 963 80.9 Plus
Dper\GL23723-PA 288 GL23723-PA 74..287 28..235 291 35.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26403-PB 182 GA26403-PB 8..182 63..236 739 78.9 Plus
Dpse\GA19309-PB 293 GA19309-PB 79..292 28..235 294 36.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15067-PA 220 GM15067-PA 1..220 17..236 1121 95.9 Plus
Dsec\GM23673-PA 288 GM23673-PA 79..287 33..235 299 37.3 Plus
Dsec\GM24608-PA 338 GM24608-PA 133..333 33..233 261 32.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:55:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19399-PA 220 GD19399-PA 1..220 17..236 1114 95.5 Plus
Dsim\GD18483-PA 288 GD18483-PA 79..287 33..235 303 37.3 Plus
Dsim\GD10083-PA 282 GD10083-PA 77..277 33..233 263 32.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:55:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23961-PA 221 GJ23961-PA 5..221 20..236 901 77.4 Plus
Dvir\GJ24088-PA 292 GJ24088-PA 74..287 28..235 293 35.9 Plus
Dvir\GJ23140-PA 286 GJ23140-PA 76..281 33..233 288 36.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11096-PA 221 GK11096-PA 1..221 17..236 949 81.9 Plus
Dwil\GK13005-PA 293 GK13005-PA 84..292 33..235 312 37.3 Plus
Dwil\GK17430-PA 345 GK17430-PA 135..340 33..233 291 33.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25709-PA 220 GE25709-PA 1..220 17..236 1079 92.3 Plus
Dyak\GE11223-PA 220 GE11223-PA 1..220 17..236 1071 91.8 Plus
Dyak\GE24064-PA 288 GE24064-PA 74..287 28..235 303 36.9 Plus
Dyak\GE20076-PA 338 GE20076-PA 133..333 33..233 264 32.1 Plus