IP02161.complete Sequence
424 bp (424 high quality bases) assembled on 2005-03-01
GenBank Submission: BT023344
> IP02161.complete
GGCTTAACCCAAGAACATCAAAATTTGAGCTCTTTTCCAAGCTTTTTAGG
TTCAGCACTTTTTCTCAGAAATTAAAAAAAAACATGGGCTGTGCACCGGG
CGGACCTTGCTGCGGACCCTGTGGACCGTGTTGCGGACCCTGTTGTGGAC
CCTGTTGTGGACCCTGTTGTGGACCCTGTTGTGGACCTTGCGGGCCCTGC
TGTGGCCCCTGTGGACCTCGTTGTGGCCCTTGCGGACCCTGTGGACCGTG
CTGTGGCACTATGGAAAAACGAAATGGCCTTCAGCGGTGCTGTCCTTTTT
AGCTGTGATTTCCCGAATAAGCAACCAAACTGTGTCCAAAAAAAGATTTC
ATTAGTCTATTGTGACAAATAAAGGGGAACTATGAAAACTATCAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAA
IP02161.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:54:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst84Dd-RA | 558 | Mst84Dd-RA | 52..445 | 3..396 | 1970 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:50:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 3189433..3189764 | 393..62 | 1660 | 100 | Minus |
chr3R | 27901430 | chr3R | 3189817..3189875 | 61..3 | 295 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:33:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:49:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 7363304..7363638 | 396..62 | 1675 | 100 | Minus |
3R | 32079331 | 3R | 7363691..7363749 | 61..3 | 295 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:43:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 7104135..7104469 | 396..62 | 1675 | 100 | Minus |
3R | 31820162 | 3R | 7104522..7104580 | 61..3 | 295 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 07:49:58 has no hits.
IP02161.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:51:03 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 3189433..3189638 | 188..393 | 100 | == | Minus |
chr3R | 3189707..3189764 | 62..119 | 100 | <- | Minus |
chr3R | 3189817..3189875 | 1..61 | 96 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:16:51 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 1..219 | 84..302 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:26:56 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 1..219 | 84..302 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:48:20 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 1..219 | 84..302 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:10:57 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 1..219 | 84..302 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:40:38 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 1..219 | 84..302 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:29:57 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 23..415 | 1..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:26:56 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 23..415 | 1..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:48:20 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 23..415 | 1..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:10:57 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 23..415 | 1..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:40:38 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Mst84Dd-RA | 23..415 | 1..393 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:51:03 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7363307..7363638 | 62..393 | 100 | <- | Minus |
3R | 7363691..7363749 | 1..61 | 96 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:51:03 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7363307..7363638 | 62..393 | 100 | <- | Minus |
3R | 7363691..7363749 | 1..61 | 96 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:51:03 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7363307..7363638 | 62..393 | 100 | <- | Minus |
3R | 7363691..7363749 | 1..61 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:48:20 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 3189029..3189360 | 62..393 | 100 | <- | Minus |
arm_3R | 3189413..3189471 | 1..61 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:47:30 Download gff for
IP02161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 7104522..7104580 | 1..61 | 96 | | Minus |
3R | 7104138..7104469 | 62..393 | 100 | <- | Minus |
IP02161.hyp Sequence
Translation from 2 to 301
> IP02161.hyp
LNPRTSKFELFSKLFRFSTFSQKLKKNMGCAPGGPCCGPCGPCCGPCCGP
CCGPCCGPCCGPCGPCCGPCGPRCGPCGPCGPCCGTMEKRNGLQRCCPF*
IP02161.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:44:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst84Dd-PA | 72 | CG17935-PA | 1..72 | 28..99 | 510 | 100 | Plus |
Mst84Db-PA | 74 | CG17934-PA | 9..66 | 30..85 | 265 | 71.7 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 2..51 | 36..85 | 259 | 80.8 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 2..51 | 36..85 | 259 | 80.8 | Plus |
Mst84Db-PA | 74 | CG17934-PA | 12..73 | 30..85 | 257 | 70.3 | Plus |
Mst87F-PB | 56 | CG17956-PB | 2..52 | 36..85 | 257 | 79.2 | Plus |
Mst84Db-PA | 74 | CG17934-PA | 2..65 | 36..97 | 224 | 61.2 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 16..53 | 34..70 | 201 | 79.5 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 16..53 | 34..70 | 201 | 79.5 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 1..53 | 28..77 | 195 | 63.6 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 1..53 | 28..77 | 195 | 63.6 | Plus |
IP02161.pep Sequence
Translation from 83 to 301
> IP02161.pep
MGCAPGGPCCGPCGPCCGPCCGPCCGPCCGPCCGPCGPCCGPCGPRCGPC
GPCGPCCGTMEKRNGLQRCCPF*
IP02161.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:29:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Mst84Dd-PA | 72 | CG17935-PA | 1..72 | 1..72 | 510 | 100 | Plus |
Mst84Db-PA | 74 | CG17934-PA | 9..66 | 3..58 | 265 | 71.7 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 2..51 | 9..58 | 259 | 80.8 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 2..51 | 9..58 | 259 | 80.8 | Plus |
Mst84Db-PA | 74 | CG17934-PA | 12..73 | 3..58 | 257 | 70.3 | Plus |
Mst87F-PB | 56 | CG17956-PB | 2..52 | 9..58 | 257 | 79.2 | Plus |
Mst87F-PA | 56 | CG17956-PA | 2..52 | 9..58 | 257 | 79.2 | Plus |
Mst98Cb-PA | 265 | CG18396-PA | 180..252 | 3..56 | 255 | 63.5 | Plus |
Pif2-PA | 118 | CG31483-PA | 2..58 | 3..57 | 243 | 66.1 | Plus |
Pif2-PA | 118 | CG31483-PA | 11..62 | 7..57 | 241 | 68.5 | Plus |
Pif2-PA | 118 | CG31483-PA | 31..81 | 7..57 | 237 | 67.9 | Plus |
Pif2-PA | 118 | CG31483-PA | 34..89 | 3..57 | 237 | 65.5 | Plus |
Mst98Ca-PA | 334 | CG11719-PA | 180..290 | 3..56 | 233 | 45.5 | Plus |
Pif2-PA | 118 | CG31483-PA | 14..77 | 3..57 | 232 | 60.9 | Plus |
Mst84Db-PA | 74 | CG17934-PA | 2..65 | 9..70 | 224 | 61.2 | Plus |
Pif2-PA | 118 | CG31483-PA | 64..115 | 8..59 | 224 | 64.8 | Plus |
Mst98Ca-PA | 334 | CG11719-PA | 207..294 | 3..57 | 222 | 50.6 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 13..63 | 6..57 | 221 | 66.7 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 14..63 | 18..70 | 220 | 67.9 | Plus |
Pif2-PA | 118 | CG31483-PA | 42..117 | 3..69 | 216 | 52.6 | Plus |
Mst98Cb-PA | 265 | CG18396-PA | 213..265 | 2..56 | 212 | 72.9 | Plus |
Mst98Ca-PA | 334 | CG11719-PA | 229..309 | 3..55 | 210 | 49.4 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 16..53 | 7..43 | 201 | 79.5 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 16..53 | 7..43 | 201 | 79.5 | Plus |
Mst98Ca-PA | 334 | CG11719-PA | 236..334 | 3..56 | 200 | 47 | Plus |
Mst84Dc-PB | 55 | CG17945-PB | 1..53 | 1..50 | 195 | 63.6 | Plus |
Mst84Dc-PA | 55 | CG17945-PA | 1..53 | 1..50 | 195 | 63.6 | Plus |
CG9130-PB | 517 | CG9130-PB | 239..290 | 8..58 | 179 | 57.6 | Plus |
CG9130-PA | 517 | CG9130-PA | 239..290 | 8..58 | 179 | 57.6 | Plus |
CG30430-PB | 51 | CG30430-PB | 4..51 | 7..57 | 169 | 58.5 | Plus |
CG30430-PA | 51 | CG30430-PA | 4..51 | 7..57 | 169 | 58.5 | Plus |
Mst98Cb-PA | 265 | CG18396-PA | 207..265 | 3..53 | 164 | 52.9 | Plus |
Mst84Da-PA | 63 | CG17946-PA | 22..63 | 2..40 | 164 | 66.7 | Plus |
CG17377-PD | 181 | CG17377-PD | 100..166 | 2..63 | 157 | 46.3 | Plus |
CG17377-PE | 207 | CG17377-PE | 100..166 | 2..63 | 157 | 46.3 | Plus |
CG31740-PA | 61 | CG31740-PA | 15..54 | 14..56 | 149 | 60 | Plus |
CG31639-PB | 58 | CG31639-PB | 5..54 | 2..51 | 148 | 58.2 | Plus |
CG31639-PA | 58 | CG31639-PA | 5..54 | 2..51 | 148 | 58.2 | Plus |
Mst87F-PB | 56 | CG17956-PB | 2..39 | 32..71 | 147 | 63.4 | Plus |
Mst87F-PA | 56 | CG17956-PA | 2..39 | 32..71 | 147 | 63.4 | Plus |
CG30430-PB | 51 | CG30430-PB | 2..40 | 24..58 | 144 | 61.9 | Plus |
CG30430-PA | 51 | CG30430-PA | 2..40 | 24..58 | 144 | 61.9 | Plus |
CG9130-PB | 517 | CG9130-PB | 241..327 | 3..61 | 138 | 39.8 | Plus |
CG9130-PA | 517 | CG9130-PA | 241..327 | 3..61 | 138 | 39.8 | Plus |
CG31740-PA | 61 | CG31740-PA | 17..60 | 3..54 | 137 | 54.5 | Plus |
CG34167-PA | 127 | CG34167-PA | 18..89 | 2..56 | 134 | 42.9 | Plus |
CG46059-PC | 47 | CG46059-PC | 2..47 | 9..56 | 131 | 53.1 | Plus |
CG46059-PB | 47 | CG46059-PB | 2..47 | 9..56 | 131 | 53.1 | Plus |
CG46059-PA | 47 | CG46059-PA | 2..47 | 9..56 | 131 | 53.1 | Plus |
CG34167-PA | 127 | CG34167-PA | 1..67 | 1..58 | 131 | 49.3 | Plus |