Clone IP02193 Report

Search the DGRC for IP02193

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:21
Well:93
Vector:pOT2
Associated Gene/TranscriptGstD10-RA
Protein status:IP02193.pep: gold
Preliminary Size:633
Sequenced Size:854

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18548 2005-01-01 Successful iPCR screen
GstD10 2008-04-29 Release 5.5 accounting
GstD10 2008-08-15 Release 5.9 accounting
GstD10 2008-12-18 5.12 accounting

Clone Sequence Records

IP02193.complete Sequence

854 bp (854 high quality bases) assembled on 2006-02-24

GenBank Submission: BT025011

> IP02193.complete
CAGCCGAGTATATTTGATTACCACGTAGTTTCCAGAGATCCCTTCAGAAA
GTGAGATAGCGTAAGATGGATTTATACTATAGACCCGGATCTGCTCCCTG
CCGCTCTGTTCTGATGACAGCCAAGGCACTGGGTGTGGAGTTCGATAAGA
AGACCATTATCAACACCCGAGCTAGGGAGCAATTCACGCCGGAATACCTG
AAAATCAATCCGCAGCACACGATCCCCACGCTGCACGACCATGGATTTGC
TTTGTGGGAGTCGCGGGCGATTATGGTTTATCTGGTGGAGAAGTACGGCA
AGGACGACAAGCTCTTCCCCAAGGATGTGCAAAAGCAGGCGTTGATCAAT
CAGCGCCTGTACTTCGACATGGGTACGCTGTATAAGAGCTTCTCCGAGTA
CTATTATCCGCAGATTTTCCTAAAGAAGCCCGCCAATGAGGAGAACTACA
AGAAGATCGAAGTGGCCTTCGAATTCCTAAACACATTCCTGGAGGGGCAG
ACCTACAGCGCTGGAGGGGATTATAGCTTGGCGGATATTGCCTTTCTGGC
CACCGTTTCCACTTTCGATGTGGCTGGCTTCGATTTCAAGCGGTATGCCA
ATGTGGCACGTTGGTACGAGAATGCCAAGAAACTGACTCCCGGTTGGGAG
GAAAACTGGGCTGGTTGCCAGGAGTTCCGCAAATACTTCGATAACTGAAT
ATATGAACCCGAAATACTGATAAAACACCTATTATTCGGTTATCAAGAAA
AAACTATATATTTAAAGATTAAGACTGGGCTGGATTTCGATAGACATTTC
AATAGTTAAATAAAAAAAATTCACTTTTAAAGTTTAAAAAAAAAAAAAAA
AAAA

IP02193.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
GstD10-RA 1038 GstD10-RA 202..1038 1..837 4185 100 Plus
GstD1-RA 828 GstD1-RA 345..502 343..500 340 81 Plus
GstD1.a 840 GstD1.a 363..520 343..500 340 81 Plus
GstD1-RA 828 GstD1-RA 190..304 188..302 245 80.8 Plus
GstD1.a 840 GstD1.a 208..322 188..302 245 80.8 Plus
GstD1-RA 828 GstD1-RA 595..693 593..691 225 81.8 Plus
GstD1.a 840 GstD1.a 613..711 593..691 225 81.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:16:05
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8190153..8190961 835..27 4000 99.6 Minus
chr3R 27901430 chr3R 8193323..8193826 691..188 645 75.2 Minus
chr3R 27901430 chr3R 8198604..8199061 204..661 400 73.5 Plus
chr3R 27901430 chr3R 8201290..8201735 214..659 370 72.2 Plus
chr3R 27901430 chr3R 8199654..8200129 184..659 355 71.6 Plus
chr3R 27901430 chr3R 8197511..8197715 205..409 320 77.1 Plus
chr3R 27901430 chr3R 8205886..8206009 537..660 245 79.8 Plus
chr3R 27901430 chr3R 8202697..8202866 213..382 205 74.7 Plus
chr3R 27901430 chr3R 8204081..8204253 213..382 200 75.7 Plus
chr3R 27901430 chr3R 8205524..8205741 175..392 190 72.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:33:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:16:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12364774..12365584 837..27 4055 100 Minus
3R 32079331 3R 12367946..12368449 691..188 645 75.2 Minus
3R 32079331 3R 12373217..12373674 204..661 400 73.5 Plus
3R 32079331 3R 12375900..12376354 205..659 385 72.3 Plus
3R 32079331 3R 12374268..12374743 184..659 355 71.6 Plus
3R 32079331 3R 12372134..12372338 205..409 320 77.1 Plus
3R 32079331 3R 12380504..12380627 537..660 245 79.8 Plus
3R 32079331 3R 12377316..12377485 213..382 205 74.7 Plus
3R 32079331 3R 12378699..12378871 213..382 200 75.7 Plus
3R 32079331 3R 12380142..12380359 175..392 190 72.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:36:23
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12105605..12106415 837..27 4055 100 Minus
3R 31820162 3R 12114048..12114216 204..372 380 81.6 Plus
3R 31820162 3R 12116731..12116935 205..409 365 78.5 Plus
3R 31820162 3R 12108968..12109125 500..343 340 81 Minus
3R 31820162 3R 12115099..12115295 184..380 310 77.1 Plus
3R 31820162 3R 12109166..12109280 302..188 245 80.8 Minus
3R 31820162 3R 12121335..12121458 537..660 245 79.8 Plus
3R 31820162 3R 12108777..12108875 691..593 225 81.8 Minus
3R 31820162 3R 12112965..12113086 205..326 220 78.6 Plus
3R 31820162 3R 12114282..12114415 438..571 205 76.8 Plus
3R 31820162 3R 12118147..12118316 213..382 205 74.7 Plus
3R 31820162 3R 12119530..12119618 213..301 190 80.8 Plus
3R 31820162 3R 12115508..12115574 593..659 170 83.5 Plus
3R 31820162 3R 12113103..12113169 343..409 155 82 Plus
3R 31820162 3R 12107128..12107176 660..612 155 87.7 Minus
3R 31820162 3R 12118481..12118595 547..661 140 74.7 Plus
3R 31820162 3R 12113372..12113420 612..660 140 85.7 Plus
3R 31820162 3R 12106522..12106549 28..1 140 100 Minus
Blast to na_te.dros performed on 2019-03-16 08:16:04 has no hits.

IP02193.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:16:44 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8190153..8190959 29..835 99 <- Minus
chr3R 8191068..8191095 1..28 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:17:00 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 1..633 66..698 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:16:15 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 1..633 66..698 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:13:21 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 1..633 66..698 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:00:40 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 1..633 66..698 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:38:40 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 1..633 66..698 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:15:20 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 1..835 1..835 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:16:15 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 1..835 1..835 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:13:21 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 1..835 1..835 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:00:40 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 1..835 1..835 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:38:40 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
GstD10-RA 18..852 1..835 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:16:44 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12364776..12365582 29..835 100 <- Minus
3R 12365691..12365718 1..28 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:16:44 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12364776..12365582 29..835 100 <- Minus
3R 12365691..12365718 1..28 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:16:44 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12364776..12365582 29..835 100 <- Minus
3R 12365691..12365718 1..28 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:13:21 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8190498..8191304 29..835 100 <- Minus
arm_3R 8191413..8191440 1..28 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:36:16 Download gff for IP02193.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12105607..12106413 29..835 100 <- Minus
3R 12106522..12106549 1..28 100   Minus

IP02193.hyp Sequence

Translation from 65 to 697

> IP02193.hyp
MDLYYRPGSAPCRSVLMTAKALGVEFDKKTIINTRAREQFTPEYLKINPQ
HTIPTLHDHGFALWESRAIMVYLVEKYGKDDKLFPKDVQKQALINQRLYF
DMGTLYKSFSEYYYPQIFLKKPANEENYKKIEVAFEFLNTFLEGQTYSAG
GDYSLADIAFLATVSTFDVAGFDFKRYANVARWYENAKKLTPGWEENWAG
CQEFRKYFDN*

IP02193.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:46:07
Subject Length Description Subject Range Query Range Score Percent Strand
GstD10-PB 210 CG18548-PB 1..210 1..210 1129 100 Plus
GstD10-PA 210 CG18548-PA 1..210 1..210 1129 100 Plus
GstD1-PB 209 CG10045-PB 2..209 1..209 817 71.3 Plus
GstD1-PA 209 CG10045-PA 2..209 1..209 817 71.3 Plus
GstD5-PA 216 CG12242-PA 1..208 1..209 731 63.2 Plus

IP02193.pep Sequence

Translation from 65 to 697

> IP02193.pep
MDLYYRPGSAPCRSVLMTAKALGVEFDKKTIINTRAREQFTPEYLKINPQ
HTIPTLHDHGFALWESRAIMVYLVEKYGKDDKLFPKDVQKQALINQRLYF
DMGTLYKSFSEYYYPQIFLKKPANEENYKKIEVAFEFLNTFLEGQTYSAG
GDYSLADIAFLATVSTFDVAGFDFKRYANVARWYENAKKLTPGWEENWAG
CQEFRKYFDN*

IP02193.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:14:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17054-PA 210 GF17054-PA 1..210 1..210 979 84.8 Plus
Dana\GF17052-PA 209 GF17052-PA 2..209 1..209 822 70.8 Plus
Dana\GF17943-PA 218 GF17943-PA 1..206 1..206 751 67.1 Plus
Dana\GF17947-PA 214 GF17947-PA 1..208 1..209 667 57.9 Plus
Dana\GF17944-PA 219 GF17944-PA 1..210 1..209 653 57.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:14:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17138-PA 210 GG17138-PA 1..210 1..210 1063 95.2 Plus
Dere\GG17139-PA 210 GG17139-PA 1..210 1..210 1038 91.4 Plus
Dere\GstD1-PA 209 GG17135-PA 3..209 2..209 821 70.7 Plus
Dere\GG18761-PA 215 GG18761-PA 1..208 1..209 768 66.5 Plus
Dere\GG18783-PA 216 GG18783-PA 1..208 1..209 724 61.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20197-PA 210 GH20197-PA 1..210 1..210 891 75.2 Plus
Dgri\GH13113-PA 210 GH13113-PA 1..210 1..210 891 75.2 Plus
Dgri\GH20186-PA 209 GH20186-PA 3..209 2..209 811 69.7 Plus
Dgri\GH13103-PA 209 GH13103-PA 3..209 2..209 807 69.2 Plus
Dgri\GH20559-PA 216 GH20559-PA 1..209 1..210 760 65.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:34
Subject Length Description Subject Range Query Range Score Percent Strand
GstD10-PB 210 CG18548-PB 1..210 1..210 1129 100 Plus
GstD10-PA 210 CG18548-PA 1..210 1..210 1129 100 Plus
GstD1-PB 209 CG10045-PB 2..209 1..209 817 71.3 Plus
GstD1-PA 209 CG10045-PA 2..209 1..209 817 71.3 Plus
GstD5-PA 216 CG12242-PA 1..208 1..209 731 63.2 Plus
GstD2-PA 215 CG4181-PA 1..208 1..209 726 62.7 Plus
GstD4-PA 215 CG11512-PA 1..208 1..209 698 62.2 Plus
GstD9-PB 218 CG10091-PB 2..210 1..208 676 58.6 Plus
GstD9-PA 218 CG10091-PA 2..210 1..208 676 58.6 Plus
GstD8-PA 212 CG4421-PA 1..205 1..206 672 61.2 Plus
GstD3-PA 199 CG4381-PA 1..189 17..206 665 63.2 Plus
GstD6-PA 215 CG4423-PA 1..206 1..207 637 58 Plus
GstD7-PA 224 CG4371-PA 4..213 1..210 565 52.6 Plus
GstD11-PA 222 CG17639-PA 6..190 3..188 463 44.1 Plus
GstD11-PB 243 CG17639-PB 27..211 3..188 463 44.1 Plus
GstE7-PA 223 CG17531-PA 6..212 3..207 380 38.5 Plus
GstE3-PA 220 CG17524-PA 4..199 1..196 348 39.4 Plus
GstE8-PB 222 CG17533-PB 6..200 3..196 336 35.5 Plus
GstE8-PA 222 CG17533-PA 6..200 3..196 336 35.5 Plus
GstE6-PA 222 CG17530-PA 4..213 1..208 335 35.2 Plus
GstE1-PA 224 CG5164-PA 9..210 5..204 325 37.4 Plus
GstE12-PC 223 CG16936-PC 6..213 3..208 324 37.3 Plus
GstE12-PB 223 CG16936-PB 6..213 3..208 324 37.3 Plus
GstE12-PD 223 CG16936-PD 6..213 3..208 324 37.3 Plus
GstE12-PA 223 CG16936-PA 6..213 3..208 324 37.3 Plus
gfzf-PD 234 CG33546-PD 1..212 1..210 322 37.2 Plus
gfzf-PE 1045 CG33546-PE 812..1023 1..210 322 37.2 Plus
gfzf-PB 1045 CG33546-PB 812..1023 1..210 322 37.2 Plus
GstE4-PA 222 CG17525-PA 4..209 1..204 321 33.8 Plus
GstE5-PA 222 CG17527-PA 4..208 1..203 308 33 Plus
GstE2-PA 221 CG17523-PA 7..209 3..204 304 34.6 Plus
GstE11-PB 225 CG5224-PB 7..203 3..197 304 35.8 Plus
GstE11-PA 225 CG5224-PA 7..203 3..197 304 35.8 Plus
GstE9-PA 221 CG17534-PA 6..190 3..185 298 36 Plus
GstE10-PB 240 CG17522-PB 6..208 3..202 295 33.7 Plus
GstE10-PA 240 CG17522-PA 6..208 3..202 295 33.7 Plus
GstE13-PB 226 CG11784-PB 6..201 3..196 248 29.4 Plus
GstE13-PA 226 CG11784-PA 6..201 3..196 248 29.4 Plus
GstE14-PA 232 CG4688-PA 8..214 3..210 240 27.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24379-PA 209 GI24379-PA 2..209 1..209 836 72.2 Plus
Dmoj\GI22354-PA 208 GI22354-PA 1..208 1..209 834 72.7 Plus
Dmoj\GI22356-PA 210 GI22356-PA 1..208 1..208 812 70.2 Plus
Dmoj\GI23195-PA 216 GI23195-PA 1..208 1..209 721 61.7 Plus
Dmoj\GI23194-PA 213 GI23194-PA 1..205 1..206 713 61.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:14:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27186-PA 209 GL27186-PA 1..209 1..210 944 83.3 Plus
Dper\GL27184-PA 209 GL27184-PA 3..209 2..209 826 72.1 Plus
Dper\GL27300-PA 217 GL27300-PA 1..209 1..210 766 64.3 Plus
Dper\GL27302-PA 215 GL27302-PA 1..208 1..209 681 60.3 Plus
Dper\GL27303-PA 213 GL27303-PA 1..210 1..210 675 58.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:14:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14986-PA 209 GA14986-PA 1..209 1..210 938 82.4 Plus
Dpse\GA10031-PA 209 GA10031-PA 3..209 2..209 826 72.1 Plus
Dpse\GA18009-PA 219 GA18009-PA 1..209 1..210 767 64.3 Plus
Dpse\GA27028-PA 215 GA27028-PA 1..208 1..209 677 59.8 Plus
Dpse\GA18171-PA 213 GA18171-PA 1..210 1..210 676 58.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:14:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26022-PA 210 GM26022-PA 1..210 1..210 1096 96.7 Plus
Dsec\GstD1-PA 209 GM26019-PA 3..209 2..209 821 71.2 Plus
Dsec\GM24017-PA 215 GM24017-PA 1..205 1..206 724 63.6 Plus
Dsec\GM24021-PA 212 GM24021-PA 1..205 1..206 697 61.7 Plus
Dsec\GM24018-PA 215 GM24018-PA 1..208 1..209 691 60.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20579-PA 210 GD20579-PA 1..210 1..210 1103 97.6 Plus
Dsim\GstD1-PA 209 GD20577-PA 3..209 2..209 820 71.2 Plus
Dsim\GD18816-PA 215 GD18816-PA 1..205 1..206 727 63.6 Plus
Dsim\GD18815-PA 215 GD18815-PA 1..208 1..209 726 62.2 Plus
Dsim\GD18818-PA 216 GD18818-PA 1..208 1..209 710 61.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:14:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24385-PA 209 GJ24385-PA 3..209 2..209 821 70.7 Plus
Dvir\GJ22854-PA 213 GJ22854-PA 1..205 1..206 727 62.6 Plus
Dvir\GJ14446-PA 213 GJ14446-PA 1..204 1..205 707 62.4 Plus
Dvir\GJ22852-PA 214 GJ22852-PA 1..205 1..209 691 59.3 Plus
Dvir\GJ22855-PA 200 GJ22855-PA 1..192 17..209 668 62.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11206-PA 210 GK11206-PA 1..210 1..210 863 73.8 Plus
Dwil\GK11204-PA 209 GK11204-PA 3..209 2..209 819 71.2 Plus
Dwil\GK11874-PA 219 GK11874-PA 1..208 1..209 759 64.6 Plus
Dwil\GK11202-PA 218 GK11202-PA 4..211 1..209 752 65.1 Plus
Dwil\GK11875-PA 214 GK11875-PA 1..208 1..209 720 63.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:14:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24529-PA 210 GE24529-PA 1..210 1..210 1074 95.2 Plus
Dyak\GstD1-PA 209 GE24527-PA 3..209 2..209 821 71.2 Plus
Dyak\GE26175-PA 215 GE26175-PA 1..208 1..209 764 65.6 Plus
Dyak\GE26178-PA 216 GE26178-PA 1..208 1..209 732 62.7 Plus
Dyak\GE26176-PA 215 GE26176-PA 1..205 1..206 725 63.6 Plus