BDGP Sequence Production Resources |
Search the DGRC for IP02234
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 22 |
Well: | 34 |
Vector: | pOT2 |
Associated Gene/Transcript | Obp50c-RC |
Protein status: | IP02234.pep: gold |
Preliminary Size: | 558 |
Sequenced Size: | 1259 |
Gene | Date | Evidence |
---|---|---|
CG30072 | 2005-01-01 | Successful iPCR screen |
Obp50c | 2008-04-29 | Release 5.5 accounting |
Obp50c | 2008-08-15 | Release 5.9 accounting |
Obp50c | 2008-12-18 | 5.12 accounting |
1259 bp (1259 high quality bases) assembled on 2005-03-04
GenBank Submission: BT023328
> IP02234.complete ACTTGCGAAGCTCTGGGCTCCAGACACGCCGACTTTCTGCTGCTCTACTC CAACCAGGTGGCGGATAAGATGGGCATGGCTTCCTCAACCTGTCTGCCAT ATGCCATGCTTCATGCACAGTGTACCATGGTATACCTAACCGCCAACTGT CCCCGTGAGAACTGGATAGATGATCCGAAGTGCAATAGTCTGCAAAAATT GCTGTCAAGTTGCACAAAGAAATCGGACGAAAAGACGAATGCACTTAAGG GAAAGGATGAGGAACTAACGGACAACGGGTGTGGGCATATAGATTCAGAA GGATCCAATCTGCTCATGGCCTGTTTTCTCACACTGATGATCGCCAAGTT CATATCGGATCATTAATTAGGGATTACCTAGATTTGTTTGTCTGGTTAAA ATGATTGCATTTAAGCCGATAAGCTTGTCTAATTGCAATTGTCTGGCTTA TGCCGAGCCCCCAATCGGAATTTTGTTTGGACTTTGACCCGCTATGAGTC CATCCCGATGACTGCACATTTTCGCTCACGAGACCGTCGTTTAAAATGTG TTTTTGCTGTGCTCGATTAATTAGTGGATCGTCACGGAACTGGAGTTATA AAGTAAGCCGACGGTGCCAGACGAAGCTCAGACTGACTAAAAAAATGGCC CGGCATATAGCCCTGCTGATCTGCTCATTGCTAGCGATGGCTGGCTGTGA TCCAATCGATGTGGACTGTACTCGCAGACAGGATTTCAATATTGTCAAGG ACTGCTGTGTCTATCCCACATTTAGGTTTGACCAGTTCAAAAGCCAGTGT GGTAAATATATGCCAGTTGGTGCTCCCAGAATTTCACCCTGCCTCTATGA ATGCATTTTCAATAAGACCAACACAGTTGTGGACGGAGCTATTCATCCTG ACAATGCCCGACTCATGCTGGAGAAGCTTTTCGGTAATCAGGACTTTGAA GAAGCCTATTTCAATGGTTTAATGGGCTGTTCGGATTCTGTGCAAGAGAT GATTAGCAACAGGAGGTCACGGCCCCAAAGAAAAACAGAACAATGCTCTC CATTCTCACTTTTCTATGGAATTTGTGCCCAGAGATATGTCTTCAACCAT TGTCCATCATCCAGCTGGTCCGGCACTGAATCTTGCGAAATGGCCCGATT GCAGAACATGAACTGTTCGAAACCATCACGTGGTTCTAGTCATCGCCTTT AAAGGCATATAATAAAATAATATATGAACATTGTAAAAAAAAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 10258958..10259697 | 1..740 | 3685 | 99.9 | Plus |
chr2R | 21145070 | chr2R | 10259916..10260310 | 840..1234 | 1975 | 100 | Plus |
chr2R | 21145070 | chr2R | 10259761..10259859 | 741..839 | 480 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 14371654..14372393 | 1..740 | 3685 | 99.9 | Plus |
2R | 25286936 | 2R | 14372612..14373007 | 840..1235 | 1980 | 100 | Plus |
2R | 25286936 | 2R | 14372457..14372555 | 741..839 | 495 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 14372853..14373592 | 1..740 | 3685 | 99.8 | Plus |
2R | 25260384 | 2R | 14373811..14374206 | 840..1235 | 1980 | 100 | Plus |
2R | 25260384 | 2R | 14373656..14373754 | 741..839 | 495 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 10258958..10259697 | 1..740 | 99 | -> | Plus |
chr2R | 10259761..10259859 | 741..839 | 98 | -> | Plus |
chr2R | 10259916..10260310 | 840..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RA | 1..657 | 546..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RB | 1..657 | 546..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RB | 1..657 | 546..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RA | 1..657 | 546..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RC | 1..558 | 645..1202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RA | 1..1234 | 1..1234 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RB | 415..1648 | 1..1234 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RB | 415..1648 | 1..1234 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RA | 1..1234 | 1..1234 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Obp50c-RC | 415..1648 | 1..1234 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14371654..14372393 | 1..740 | 99 | -> | Plus |
2R | 14372457..14372555 | 741..839 | 100 | -> | Plus |
2R | 14372612..14373006 | 840..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14371654..14372393 | 1..740 | 99 | -> | Plus |
2R | 14372457..14372555 | 741..839 | 100 | -> | Plus |
2R | 14372612..14373006 | 840..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14371654..14372393 | 1..740 | 99 | -> | Plus |
2R | 14372457..14372555 | 741..839 | 100 | -> | Plus |
2R | 14372612..14373006 | 840..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 10259159..10259898 | 1..740 | 99 | -> | Plus |
arm_2R | 10259962..10260060 | 741..839 | 100 | -> | Plus |
arm_2R | 10260117..10260511 | 840..1234 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 14372853..14373592 | 1..740 | 99 | -> | Plus |
2R | 14373656..14373754 | 741..839 | 100 | -> | Plus |
2R | 14373811..14374205 | 840..1234 | 100 | Plus |
Translation from 545 to 1201
> IP02234.hyp MCFCCARLISGSSRNWSYKVSRRCQTKLRLTKKMARHIALLICSLLAMAG CDPIDVDCTRRQDFNIVKDCCVYPTFRFDQFKSQCGKYMPVGAPRISPCL YECIFNKTNTVVDGAIHPDNARLMLEKLFGNQDFEEAYFNGLMGCSDSVQ EMISNRRSRPQRKTEQCSPFSLFYGICAQRYVFNHCPSSSWSGTESCEMA RLQNMNCSKPSRGSSHRL*
Translation from 545 to 1201
> IP02234.pep MCFCCARLISGSSRNWSYKVSRRCQTKLRLTKKMARHIALLICSLLAMAG CDPIDVDCTRRQDFNIVKDCCVYPTFRFDQFKSQCGKYMPVGAPRISPCL YECIFNKTNTVVDGAIHPDNARLMLEKLFGNQDFEEAYFNGLMGCSDSVQ EMISNRRSRPQRKTEQCSPFSLFYGICAQRYVFNHCPSSSWSGTESCEMA RLQNMNCSKPSRGSSHRL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13501-PA | 193 | GF13501-PA | 2..188 | 34..214 | 567 | 55.3 | Plus |
Dana\GF13502-PA | 177 | GF13502-PA | 20..177 | 55..213 | 283 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20450-PA | 186 | GG20450-PA | 1..185 | 34..218 | 911 | 89.7 | Plus |
Dere\GG20451-PA | 174 | GG20451-PA | 2..170 | 38..207 | 279 | 32.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19745-PA | 166 | GH19745-PA | 40..158 | 95..213 | 199 | 35.8 | Plus |
Dgri\GH22122-PA | 175 | GH22122-PA | 28..167 | 67..211 | 158 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Obp50c-PC | 185 | CG30072-PC | 1..185 | 34..218 | 1015 | 100 | Plus |
Obp50d-PA | 173 | CG30074-PA | 1..170 | 34..207 | 286 | 30.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20279-PA | 154 | GI20279-PA | 4..141 | 70..207 | 204 | 31.7 | Plus |
Dmoj\GI19255-PA | 179 | GI19255-PA | 32..171 | 67..211 | 158 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10689-PA | 424 | GL10689-PA | 216..422 | 21..217 | 543 | 49.8 | Plus |
Dper\GL10690-PA | 187 | GL10690-PA | 14..186 | 33..207 | 299 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Obp50d-PA | 187 | GA15625-PA | 14..186 | 33..207 | 299 | 35.2 | Plus |
Dpse\Obp50c-PA | 99 | GA15623-PA | 1..97 | 124..217 | 265 | 50.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21537-PA | 185 | GM21537-PA | 1..185 | 34..218 | 941 | 92.4 | Plus |
Dsec\GM21538-PA | 173 | GM21538-PA | 1..170 | 34..207 | 265 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Obp50c-PA | 185 | GD11047-PA | 1..185 | 34..218 | 944 | 93 | Plus |
Dsim\Obp50d-PA | 173 | GD11048-PA | 1..170 | 34..207 | 279 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Obp50c-PA | 188 | GJ22008-PA | 1..167 | 34..200 | 309 | 36.3 | Plus |
Dvir\Obp50a-PA | 179 | GJ20334-PA | 32..171 | 67..211 | 156 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21472-PA | 195 | GK21472-PA | 2..194 | 34..218 | 427 | 45.6 | Plus |
Dwil\GK21475-PA | 167 | GK21475-PA | 4..156 | 55..207 | 274 | 32.5 | Plus |
Dwil\GK19396-PA | 179 | GK19396-PA | 22..173 | 56..210 | 271 | 34 | Plus |