IP02236.complete Sequence
1672 bp assembled on 2009-06-15
GenBank Submission: BT088819.1
> IP02236.complete
AAATTGTTTTTTCAAAATTTTACGTTTAATTCTTGCCCTGCTTTATAGGG
AGGCAATTTCAAAATGTCTTCGGTGCTGCATCTACTGGGTTTCTTGTGGC
TTCCTTTGCTGGTTTATAGTGTATCCAATGATATGGGAGGATTGCAGAAA
TGTACAGAACTTCTAAATACACATAAGTTGGTCTACTGTTGTGGCAAATC
CTTTCTGGATAAGTTCCCCTTTGTTGGCAGCAATTGCACACCGTTTTGGG
ATGACTATGGTCCTTGCCGCTATGAATGTCTGTATAGGCACTGGGACCTC
CTTGATCAGGATAACAAGATCAAAAAACCGGAGCTCTACCTGATGATCAC
CAGCCTCTACAGCCCCTTGAATGGTTATGATAAATACGGGGCCGCTTTTA
AGGCAGCTCACGAGACTTGCGAAGCTCTGGGCTCCAGACACGCCGACTTT
CTGCTGCTCTACTCCAACCAGGTGGCGGATAAGATGGGCATGGCTTCCTC
AACCTGTCTGCCATATGCCATGCTTCATGCACAGTGTACCATGGTATACC
TAACCGCCAACTGTCCCCGTGAGAACTGGATAGATGATCCGAAGTGCAAT
AGTCTGCAAAAATTGCTGTCAAGTTGCACAAAGAAATTGGACGAAAAGAC
GAATGCACTTAAGGGAAAGGATGAGGAACTAACGGACAACGGGTGTGGGC
ATATAGATTCAGAAGGATCCAATCTGCTCATGGCCTGTTTTCTCACACTG
ATGATCGCCAAGTTCATATCGGATCATTAATTAGGGATTACCTAGATTTG
TTTGTCTGGTTAAAATGATTGCATTTAAGCCGATAAGCTTGTCTAATTGC
AATTGTCTGGCTTATGCCGAGCCCCCAATCGGAATTTTGTTTGGACTTTG
ACCCGCTATGAGTCCATCCCGATGACTGCACATTTTCGCTCACGAGACCG
TCGTTTAAAATGTGTTTTTGCTGTGCTCGATTAATTAGTGGATCGTCACG
GAACTGGAGTTATAAAGTAAGCCGACGGTGCCAGACGAAGCTCAGACTGA
CTAAAAAAATGGCCCGGCATATAGCCCTGCTGATCTGCTCATTGCTAGCG
ATGGCTGGCTGTGATCCAATCGATGTGGACTGTACTCGCAGACAGGATTT
CAATATTGTCAAGGACTGCTGTGTCTATCCCACATTTAGGTTTGACCAGT
TCAAAAGCCAGTGTGGTAAATATATGCCAGTTGGTGCTCCCAGAATTTCA
CCCTGCCTCTATGAATGCATTTTCAATAAGACCAACACAGTTGTGGACGG
AGCTATTCATCCTGACAATGCCCGACTCATGCTGGAGAAGCTTTTCGGTA
ATCAGGACTTTGAAGAAGCCTATTTCAATGGTTTAATGGGCTGTTCGGAT
TCTGTGCAAGAGATGATTAGCAACAGGAGGTCACGGCCCCAAAGAAAAAC
AGAACAATGCTCTCCATTCTCACTTTTCTATGGAATTTGTGCCCAGAGAT
ATGTCTTCAACCATTGTCCATCATCCAGCTGGTCCGGCACTGAATCTTGC
GAAATGGCCCGATTGCAGAACATGAACTGTTCGAAACCATCACGTGGTTC
TAGTCATCGCCTTTAAAGGCATATAATAAAATAATATATGAACATTGTAA
AAAAAAAAAAAAAAAAAAAAAA
IP02236.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:31:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp50c-RA | 1234 | Obp50c-RA | 1..1234 | 415..1648 | 6170 | 100 | Plus |
Obp50b-RA | 940 | Obp50b-RA | 5..940 | 1..936 | 4680 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:58:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 10258808..10259697 | 265..1154 | 4450 | 100 | Plus |
chr2R | 21145070 | chr2R | 10259916..10260310 | 1254..1648 | 1975 | 100 | Plus |
chr2R | 21145070 | chr2R | 10258490..10258753 | 1..264 | 1320 | 100 | Plus |
chr2R | 21145070 | chr2R | 10259761..10259859 | 1155..1253 | 480 | 99 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:33:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:58:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14371504..14372393 | 265..1154 | 4450 | 100 | Plus |
2R | 25286936 | 2R | 14372612..14373007 | 1254..1649 | 1980 | 100 | Plus |
2R | 25286936 | 2R | 14371186..14371449 | 1..264 | 1320 | 100 | Plus |
2R | 25286936 | 2R | 14372457..14372555 | 1155..1253 | 495 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 14372703..14373592 | 265..1154 | 4450 | 100 | Plus |
2R | 25260384 | 2R | 14373811..14374206 | 1254..1649 | 1980 | 100 | Plus |
2R | 25260384 | 2R | 14372385..14372648 | 1..264 | 1320 | 100 | Plus |
2R | 25260384 | 2R | 14373656..14373754 | 1155..1253 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 14:58:06 has no hits.
IP02236.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:59:23 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 10259761..10259859 | 1155..1253 | 98 | -> | Plus |
chr2R | 10259916..10260310 | 1254..1648 | 100 | | Plus |
chr2R | 10258490..10258753 | 1..264 | 100 | -> | Plus |
chr2R | 10258808..10259697 | 265..1154 | 100 | -> | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:32 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp50b-RA | 1..717 | 64..780 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:47:54 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp50b-RB | 1..717 | 64..780 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:55:05 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp50b-RB | 1..717 | 64..780 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:19:51 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp50b-RB | 1..717 | 64..780 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-15 14:16:40 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp50c-RA | 1..1234 | 415..1648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:47:54 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp50c-RB | 1..1648 | 1..1648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:55:05 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp50c-RB | 1..1648 | 1..1648 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:19:51 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Obp50c-RC | 1..1648 | 1..1648 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:59:23 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14371186..14371449 | 1..264 | 100 | -> | Plus |
2R | 14371504..14372393 | 265..1154 | 100 | -> | Plus |
2R | 14372457..14372555 | 1155..1253 | 100 | -> | Plus |
2R | 14372612..14373006 | 1254..1648 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:59:23 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14371186..14371449 | 1..264 | 100 | -> | Plus |
2R | 14371504..14372393 | 265..1154 | 100 | -> | Plus |
2R | 14372457..14372555 | 1155..1253 | 100 | -> | Plus |
2R | 14372612..14373006 | 1254..1648 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:59:23 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14371186..14371449 | 1..264 | 100 | -> | Plus |
2R | 14371504..14372393 | 265..1154 | 100 | -> | Plus |
2R | 14372457..14372555 | 1155..1253 | 100 | -> | Plus |
2R | 14372612..14373006 | 1254..1648 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:55:05 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10258691..10258954 | 1..264 | 100 | -> | Plus |
arm_2R | 10259009..10259898 | 265..1154 | 100 | -> | Plus |
arm_2R | 10259962..10260060 | 1155..1253 | 100 | -> | Plus |
arm_2R | 10260117..10260511 | 1254..1648 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:23:25 Download gff for
IP02236.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14373811..14374205 | 1254..1648 | 100 | | Plus |
2R | 14372385..14372648 | 1..264 | 100 | -> | Plus |
2R | 14372703..14373592 | 265..1154 | 100 | -> | Plus |
2R | 14373656..14373754 | 1155..1253 | 100 | -> | Plus |
IP02236.pep Sequence
Translation from 63 to 779
> IP02236.pep
MSSVLHLLGFLWLPLLVYSVSNDMGGLQKCTELLNTHKLVYCCGKSFLDK
FPFVGSNCTPFWDDYGPCRYECLYRHWDLLDQDNKIKKPELYLMITSLYS
PLNGYDKYGAAFKAAHETCEALGSRHADFLLLYSNQVADKMGMASSTCLP
YAMLHAQCTMVYLTANCPRENWIDDPKCNSLQKLLSSCTKKLDEKTNALK
GKDEELTDNGCGHIDSEGSNLLMACFLTLMIAKFISDH*
IP02236.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:00:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF13500-PA | 235 | GF13500-PA | 4..211 | 3..212 | 678 | 56.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:01:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20449-PA | 237 | GG20449-PA | 1..236 | 1..236 | 1004 | 84.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp50b-PB | 238 | CG30073-PB | 1..238 | 1..238 | 1307 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:01:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL10689-PA | 424 | GL10689-PA | 2..215 | 3..210 | 480 | 44.2 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:01:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\Obp50b-PA | 245 | GA24449-PA | 2..215 | 3..210 | 485 | 44.7 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:01:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM21536-PA | 238 | GM21536-PA | 1..238 | 1..238 | 1134 | 92.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:01:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\Obp50b-PA | 218 | GD11045-PA | 17..218 | 17..228 | 977 | 86.3 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:01:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK21473-PA | 238 | GK21473-PA | 7..191 | 6..192 | 435 | 44.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:01:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13580-PA | 237 | GE13580-PA | 1..236 | 1..236 | 933 | 80.9 | Plus |
IP02236.hyp Sequence
Translation from 63 to 779
> IP02236.hyp
MSSVLHLLGFLWLPLLVYSVSNDMGGLQKCTELLNTHKLVYCCGKSFLDK
FPFVGSNCTPFWDDYGPCRYECLYRHWDLLDQDNKIKKPELYLMITSLYS
PLNGYDKYGAAFKAAHETCEALGSRHADFLLLYSNQVADKMGMASSTCLP
YAMLHAQCTMVYLTANCPRENWIDDPKCNSLQKLLSSCTKKLDEKTNALK
GKDEELTDNGCGHIDSEGSNLLMACFLTLMIAKFISDH*
IP02236.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:47:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Obp50b-PB | 238 | CG30073-PB | 1..238 | 1..238 | 1307 | 100 | Plus |