BDGP Sequence Production Resources |
Search the DGRC for IP02321
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 23 |
Well: | 21 |
Vector: | pOT2 |
Associated Gene/Transcript | Rpb7-RA |
Protein status: | IP02321.pep: gold |
Preliminary Size: | 522 |
Sequenced Size: | 732 |
Gene | Date | Evidence |
---|---|---|
CG31155 | 2005-01-01 | Successful iPCR screen |
Rpb7 | 2008-04-29 | Release 5.5 accounting |
Rpb7 | 2008-08-15 | Release 5.9 accounting |
Rpb7 | 2008-12-18 | 5.12 accounting |
732 bp (732 high quality bases) assembled on 2005-03-01
GenBank Submission: BT023312
> IP02321.complete TTTACTTTAGTTTTTTACCTTAAATTTAATTAACAATGTTTTACCACATA TCGCTGGAGCAAGAGATTCTGCTTCATCCACGTTACTTTGGCCCGCAACT GCTGGAGACCGTGAAGCAGAAACTCTACTCCGAAGTGGAGGGCACCTGCA CGGGAAAGTACGGATTCGTGATAGCGGTGACGACGATAGATCAAATCGGA TCGGGTGTCATCCAGCCGGGCCAGGGATTTGTGGTGTATCCGGTCAAGTA CAAAGCTATCGTCTTTCGGCCATTTAAGGGCGAAGTTCTGGACGCAGTGG TCAAGCAGATCAACAAAGTGGGCATGTTTGCAGAGATCGGCCCGCTGTCC TGCTTCATTTCGCATCATTCTATTCCCGCCGACATGCAGTTCTGCCCGAA TGGGAATCCGCCCTGCTATAAGAGTAAAGATGAGGATGTGGTTATCTCCG GAGAGGATAAGATTCGGCTGAAGATTGTGGGCACACGAGTAGATGCCACT GGAATTTTTGCAATTGGCACTTTGATGGACGACTACTTGGGATTGGTGTC CAACTAAATTCAATCGTTTTGCGTACAATTTATATATATATATATATTAA ACTTTAATGAAATGCATTTAGACAGTTAAACATCTATGTGTATATAGTAA TAAATATGTCTGTACTTTATAAGATTTGATTTCAATTAAAGGTACGTTAC ATTTGTAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11047331..11047651 | 368..48 | 1590 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 11046881..11047078 | 706..507 | 920 | 98.5 | Minus |
chr3R | 27901430 | chr3R | 11047136..11047273 | 506..369 | 690 | 100 | Minus |
chr3R | 27901430 | chr3R | 11047709..11047755 | 47..1 | 235 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15222703..15223023 | 368..48 | 1605 | 100 | Minus |
3R | 32079331 | 3R | 15222249..15222450 | 708..507 | 1010 | 100 | Minus |
3R | 32079331 | 3R | 15222508..15222645 | 506..369 | 690 | 100 | Minus |
3R | 32079331 | 3R | 15223081..15223127 | 47..1 | 235 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14963534..14963854 | 368..48 | 1605 | 100 | Minus |
3R | 31820162 | 3R | 14963080..14963281 | 708..507 | 1010 | 100 | Minus |
3R | 31820162 | 3R | 14963339..14963476 | 506..369 | 690 | 100 | Minus |
3R | 31820162 | 3R | 14963912..14963958 | 47..1 | 235 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11047136..11047273 | 369..506 | 100 | <- | Minus |
chr3R | 11047331..11047651 | 48..368 | 99 | <- | Minus |
chr3R | 11047709..11047755 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 1..522 | 36..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 1..522 | 36..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 1..522 | 36..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 1..522 | 36..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 1..522 | 36..557 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 1..706 | 1..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 1..706 | 1..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 54..759 | 1..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 1..706 | 1..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rpb7-RA | 54..759 | 1..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15222703..15223023 | 48..368 | 100 | <- | Minus |
3R | 15222251..15222450 | 507..706 | 100 | <- | Minus |
3R | 15222508..15222645 | 369..506 | 100 | <- | Minus |
3R | 15223081..15223127 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15222703..15223023 | 48..368 | 100 | <- | Minus |
3R | 15222251..15222450 | 507..706 | 100 | <- | Minus |
3R | 15222508..15222645 | 369..506 | 100 | <- | Minus |
3R | 15223081..15223127 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15222703..15223023 | 48..368 | 100 | <- | Minus |
3R | 15222251..15222450 | 507..706 | 100 | <- | Minus |
3R | 15222508..15222645 | 369..506 | 100 | <- | Minus |
3R | 15223081..15223127 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11047973..11048172 | 507..706 | 100 | <- | Minus |
arm_3R | 11048230..11048367 | 369..506 | 100 | <- | Minus |
arm_3R | 11048425..11048745 | 48..368 | 100 | <- | Minus |
arm_3R | 11048803..11048849 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14963534..14963854 | 48..368 | 100 | <- | Minus |
3R | 14963912..14963958 | 1..47 | 100 | Minus | |
3R | 14963082..14963281 | 507..706 | 100 | <- | Minus |
3R | 14963339..14963476 | 369..506 | 100 | <- | Minus |
Translation from 35 to 556
> IP02321.hyp MFYHISLEQEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTT IDQIGSGVIQPGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAE IGPLSCFISHHSIPADMQFCPNGNPPCYKSKDEDVVISGEDKIRLKIVGT RVDATGIFAIGTLMDDYLGLVSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpb7-PA | 173 | CG31155-PA | 1..173 | 1..173 | 907 | 100 | Plus |
Translation from 35 to 556
> IP02321.pep MFYHISLEQEILLHPRYFGPQLLETVKQKLYSEVEGTCTGKYGFVIAVTT IDQIGSGVIQPGQGFVVYPVKYKAIVFRPFKGEVLDAVVKQINKVGMFAE IGPLSCFISHHSIPADMQFCPNGNPPCYKSKDEDVVISGEDKIRLKIVGT RVDATGIFAIGTLMDDYLGLVSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11824-PA | 173 | GF11824-PA | 1..173 | 1..173 | 895 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20814-PA | 173 | GG20814-PA | 1..173 | 1..173 | 895 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18755-PA | 173 | GH18755-PA | 1..173 | 1..173 | 889 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rpb7-PA | 173 | CG31155-PA | 1..173 | 1..173 | 907 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22645-PA | 173 | GI22645-PA | 1..173 | 1..173 | 889 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12210-PA | 173 | GL12210-PA | 1..173 | 1..173 | 895 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27654-PA | 173 | GA27654-PA | 1..173 | 1..173 | 895 | 98.8 | Plus |
Dpse\GA16051-PA | 173 | GA16051-PA | 1..173 | 1..173 | 895 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25797-PA | 173 | GM25797-PA | 1..173 | 1..173 | 907 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20374-PA | 173 | GD20374-PA | 1..173 | 1..173 | 907 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23373-PA | 173 | GJ23373-PA | 1..173 | 1..173 | 889 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11212-PA | 173 | GK11212-PA | 1..173 | 1..173 | 895 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26402-PA | 173 | GE26402-PA | 1..173 | 1..173 | 895 | 98.8 | Plus |