IP02368.complete Sequence
537 bp (537 high quality bases) assembled on 2005-03-01
GenBank Submission: BT023305
> IP02368.complete
CAGTGCTCTACTAGGGTTATTAACAAAATGAATGCCTCCATTTCTCTACT
ATGCCTTGCCCTGCTCCTGATTAGTCCTTTTTGCTTGGGCTATTCTGACG
AGGAAAGGGAATCTGACAGCCTTAGGGTTGCAGAAATTATTCGAACCTCC
AACGACGCCGAATCGAAGATCAATCGAACCCAAGAGCTGCTCGATATCTT
TAGGCGCCTGACTCCCACGTTGTCCCCTGAACAAAGGGAAAAGATTGAAA
GATCCATTCAGGAGCATACTGATGAAATTCTAATCGATGGAGTTCCGAGT
CAGGGGGGGCGAAAGACCAAGTACGTCGGAAAAATCCTATCTCCAGTGGC
ACAAGGCCTTGCAGTTGGATTCTTTGAAGAACTCGGTGGCAGCCTTTCCA
GGCTCTTTACTGGATAATCACCATTCAGGACTAAGGGATTTTGAGAAACA
TTAGATAAACATGTTGTAAGCTCAAGTCCAAATAAAATATTCCAGTTTGA
GAAGATGATTCTTAAAAAAAAAAAAAAAAAAAAAAAA
IP02368.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:54:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TotC-RA | 683 | TotC-RA | 136..652 | 1..517 | 2585 | 100 | Plus |
TotA.a | 829 | TotA.a | 330..449 | 262..381 | 240 | 80 | Plus |
TotA.a | 829 | TotA.a | 92..274 | 24..206 | 240 | 75.4 | Plus |
TotA-RA | 829 | TotA-RA | 330..449 | 262..381 | 240 | 80 | Plus |
TotA-RA | 829 | TotA-RA | 92..274 | 24..206 | 240 | 75.4 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:39:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 16696997..16697459 | 51..513 | 2315 | 100 | Plus |
chr3R | 27901430 | chr3R | 16695066..16695395 | 52..381 | 390 | 74.5 | Plus |
chr3R | 27901430 | chr3R | 16696884..16696933 | 1..50 | 250 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:34:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:39:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20873118..20873584 | 51..517 | 2335 | 100 | Plus |
3R | 32079331 | 3R | 20871187..20871516 | 52..381 | 390 | 74.5 | Plus |
3R | 32079331 | 3R | 20873005..20873054 | 1..50 | 250 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:43:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 20613949..20614415 | 51..517 | 2335 | 100 | Plus |
3R | 31820162 | 3R | 20613836..20613885 | 1..50 | 250 | 100 | Plus |
3R | 31820162 | 3R | 20612228..20612347 | 262..381 | 240 | 80 | Plus |
3R | 31820162 | 3R | 20612018..20612172 | 52..206 | 220 | 76.1 | Plus |
Blast to na_te.dros performed on 2019-03-15 20:39:08 has no hits.
IP02368.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:39:55 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 16696884..16696933 | 1..50 | 100 | -> | Plus |
chr3R | 16696997..16697459 | 51..513 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:17:28 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 1..390 | 28..417 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:27:00 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 1..390 | 28..417 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:09:51 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 1..390 | 28..417 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:11:00 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 1..390 | 28..417 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:40:38 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 1..390 | 28..417 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:30:02 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 18..530 | 1..513 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:27:00 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 18..530 | 1..513 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:09:51 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 18..530 | 1..513 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:11:00 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 18..530 | 1..513 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:38 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TotC-RA | 18..530 | 1..513 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:39:55 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20873005..20873054 | 1..50 | 100 | -> | Plus |
3R | 20873118..20873580 | 51..513 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:39:55 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20873005..20873054 | 1..50 | 100 | -> | Plus |
3R | 20873118..20873580 | 51..513 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:39:55 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20873005..20873054 | 1..50 | 100 | -> | Plus |
3R | 20873118..20873580 | 51..513 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:09:51 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16698727..16698776 | 1..50 | 100 | -> | Plus |
arm_3R | 16698840..16699302 | 51..513 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:47:34 Download gff for
IP02368.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20613949..20614411 | 51..513 | 100 | | Plus |
3R | 20613836..20613885 | 1..50 | 100 | -> | Plus |
IP02368.hyp Sequence
Translation from 0 to 416
> IP02368.hyp
QCSTRVINKMNASISLLCLALLLISPFCLGYSDEERESDSLRVAEIIRTS
NDAESKINRTQELLDIFRRLTPTLSPEQREKIERSIQEHTDEILIDGVPS
QGGRKTKYVGKILSPVAQGLAVGFFEELGGSLSRLFTG*
IP02368.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:49:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TotC-PA | 129 | CG31508-PA | 1..129 | 10..138 | 640 | 100 | Plus |
TotA-PA | 129 | CG31509-PA | 1..129 | 10..138 | 461 | 65.9 | Plus |
TotB-PA | 138 | CG5609-PA | 1..127 | 10..137 | 336 | 53.1 | Plus |
IP02368.pep Sequence
Translation from 27 to 416
> IP02368.pep
MNASISLLCLALLLISPFCLGYSDEERESDSLRVAEIIRTSNDAESKINR
TQELLDIFRRLTPTLSPEQREKIERSIQEHTDEILIDGVPSQGGRKTKYV
GKILSPVAQGLAVGFFEELGGSLSRLFTG*
IP02368.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:22:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG24221-PA | 129 | GG24221-PA | 1..129 | 1..129 | 469 | 65.1 | Plus |
Dere\GG24210-PA | 129 | GG24210-PA | 1..129 | 1..129 | 460 | 63.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:55:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TotC-PA | 129 | CG31508-PA | 1..129 | 1..129 | 640 | 100 | Plus |
TotA-PA | 129 | CG31509-PA | 1..129 | 1..129 | 461 | 65.9 | Plus |
TotB-PA | 138 | CG5609-PA | 1..127 | 1..128 | 336 | 53.1 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:22:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA16288-PB | 154 | GA16288-PB | 35..149 | 21..129 | 226 | 43.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:22:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM23144-PA | 129 | GM23144-PA | 1..129 | 1..129 | 613 | 91.5 | Plus |
Dsec\GM23143-PA | 129 | GM23143-PA | 1..129 | 1..129 | 483 | 68.2 | Plus |
Dsec\GM23142-PA | 129 | GM23142-PA | 1..129 | 1..129 | 483 | 68.2 | Plus |
Dsec\GM23145-PA | 139 | GM23145-PA | 1..127 | 1..128 | 371 | 55.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:23:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD19383-PA | 129 | GD19383-PA | 1..129 | 1..129 | 613 | 91.5 | Plus |
Dsim\GD19381-PA | 129 | GD19381-PA | 1..129 | 1..129 | 478 | 66.7 | Plus |
Dsim\GD19382-PA | 129 | GD19382-PA | 1..129 | 1..129 | 473 | 65.9 | Plus |
Dsim\GD19384-PA | 139 | GD19384-PA | 1..127 | 1..128 | 368 | 54.7 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:23:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE25694-PA | 129 | GE25694-PA | 1..129 | 1..129 | 484 | 67.4 | Plus |
Dyak\GE25695-PA | 139 | GE25695-PA | 1..129 | 1..129 | 393 | 53.5 | Plus |
Dyak\GE18068-PA | 140 | GE18068-PA | 1..109 | 1..109 | 332 | 54.1 | Plus |