Clone IP02564 Report

Search the DGRC for IP02564

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:25
Well:64
Vector:pOT2
Associated Gene/TranscriptWnt6-RB
Protein status:IP02564.pep: gold
Preliminary Size:1017
Sequenced Size:1806

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4969 2005-01-01 Successful iPCR screen
Wnt6 2008-04-29 Stopped prior to 5.5

Clone Sequence Records

IP02564.complete Sequence

1806 bp assembled on 2011-09-06

GenBank Submission: BT128878.1

> IP02564.complete
AGCCGCTTGATTAATTCGCACACGTCAACGGTATTCAAATAAGCATCTCG
TGTACTCATCGTGGCCGCAATAAAAACGGCGTTAAGTTTTACTACCTGCC
AAAAAAAAATACAGCAAAAACATTATATATATACATATATGTATACATAT
ACAATAGCACTCACTCACTAAACAAAGTAAATTAAAACAGCTCAACGGGC
CAAAATTTGGTTTGTTGCCGCTGCATTTGGCGGCTTCAATCGATATGCGT
TTGCTCATGGTAATTGCAATTTTAATATTCGCAATGCCAATGACTGGATT
CGGCTGGGCGGAGGGCACCAACATCCTTCTCGATCCAAATCTAATGTGCA
AAAAGACACGTCGTCTGCGCGGCAAGTTGGCCGAAATCTGTCGGCACGAT
TCGGCCCTGCTCAAAGAGATCATCATCAATGGCATCAACCTGGGCTTCCG
CGAATGCGAGTTTCAATTCCGCAACCGCCGGTGGAACTGCACTGTTCTGC
GCAAGAGCATGAGGAAAATCTTAATGCGCGATTCCCGAGAGACGGGTTTC
GTGAACGCGATCACAGCCGCGGGAGTGACCTACGCCGTGACGAAGGCCTG
CACGATGGGCCAGCTGGTGGAGTGCTCCTGCGACAAGGCGCATATGCGCA
GAAACGGCGGCCAGCCACAGATGGTGACGGCGGCCACCGCAGAGGCGGCA
CTGGAGCGGCAGCAACAGGCGGCGATGCTGCGACAACAAATGCCGCTGCA
GGATCAACATCCCAGTCAGCGGCTGAGTCGCATGAACAACGCCAGCACCA
TGACCGATATAGCTCCAGTGGAGCATAGAGGCGGGCGAAATCGCAGGCCC
GGCGGAAGGCGGGGGCGCCGCAAGTTCTGGGACAACATTAAGTTTCCCGA
GGGGCAGTGGGAGTGGGGCGGATGCAGTGACAACGTTAACTTTGGCCTTC
GTCACTCGCGCGTTTTCCTTGACGCCAAGCAAAGGCAAAGGCGTAGCGAT
CTGGGCACGCTGGTTAAGTTCCACAATAATAACGCAGGTCGATTGGCCAT
TCGCGATGCCATGCGGCTGGAGTGCAAGTGTCACGGGCTTTCCGGCTCCT
GCACGGTGAAGACCTGCTGGCTGAAGATGCCTCCGTTCCGAGAAGTGGCA
GGACGACTGCGAGACCGGTATGACAGTGCTAGGAAGGTGACGTTGCGCAA
CGACGGGAACAGCTTCATGCCGGAGAGTCCGCACGCGAGGCCAGCGAACA
AGTACCAGTTGGTCTTCGCAGACGATTCGCCCGACTTTTGCACACCCAAC
TCCAAGACGGGAGCACTCGGAACTCAGGGCAGGGAGTGCAATGTGACCAG
TTCCGGATCGGATCGATGCGATCGCTTGTGCTGCAATCGAGGACACACCC
GCAGGATTGTGGAGGAGCAAACCAACTGCAAGTGCGTCTTTAAGTGGTGC
TGCGAGGTGACCTGCGAAAAGTGCCTGGAACACCGGGCGGTCAACACCTG
CCTCTGAGAGTGTCCTTCATTATATGTATTACTTTCTTCGGTTTAGTCAG
GAATAGAATTTTGAAAGCTTTCCATTTCGCGTGATAGAAAACACACACTT
ACAGAGAAAACGTTTTAAGTATTAACTAACAAGTAAACACGAGTATCTCT
AATCTTTTAGCTAGTTGTAAATACGAAATAAAAACCACATAAACATGCCT
ACGTTATATCATTCATATGCAGCTCATGTAAGCCTTGTAAATAGTCGCAA
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAA

IP02564.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 10:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7350880..7351586 1045..1751 3535 100 Plus
chr2L 23010047 chr2L 7350244..7350760 530..1046 2570 99.8 Plus
chr2L 23010047 chr2L 7333856..7334160 1..307 1470 99.3 Plus
chr2L 23010047 chr2L 7341898..7342122 306..530 1125 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7351818..7352539 1045..1766 3565 99.6 Plus
2L 23513712 2L 7351182..7351698 530..1046 2585 100 Plus
2L 23513712 2L 7334801..7335106 1..307 1485 99.7 Plus
2L 23513712 2L 7342836..7343060 306..530 1125 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:01:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7351818..7352539 1045..1766 3565 99.5 Plus
2L 23513712 2L 7351182..7351698 530..1046 2585 100 Plus
2L 23513712 2L 7334801..7335106 1..307 1495 99.6 Plus
2L 23513712 2L 7342836..7343060 306..530 1125 100 Plus
Blast to na_te.dros performed on 2019-03-15 10:53:08 has no hits.

IP02564.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 10:53:47 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7341899..7342122 307..530 100 -> Plus
chr2L 7350245..7350759 531..1045 99 -> Plus
chr2L 7350881..7351586 1046..1751 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-09-06 10:16:21 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt6-RB 1..1263 245..1507 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:29:02 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt6-RB 1..1263 245..1507 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:15:31 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt6-RB 1..1263 245..1507 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-06 10:16:21 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt6-RB 1..1750 1..1751 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:29:02 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt6-RB 1088..2837 1..1751 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:15:31 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
Wnt6-RB 1088..2837 1..1751 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:47 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7342837..7343060 307..530 100 -> Plus
2L 7334801..7335105 1..306 99 -> Plus
2L 7351183..7351697 531..1045 100 -> Plus
2L 7351819..7352524 1046..1751 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:47 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7342837..7343060 307..530 100 -> Plus
2L 7334801..7335105 1..306 99 -> Plus
2L 7351183..7351697 531..1045 100 -> Plus
2L 7351819..7352524 1046..1751 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 10:53:47 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7342837..7343060 307..530 100 -> Plus
2L 7334801..7335105 1..306 99 -> Plus
2L 7351183..7351697 531..1045 100 -> Plus
2L 7351819..7352524 1046..1751 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:29:02 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7334801..7335105 1..306 99 -> Plus
arm_2L 7342837..7343060 307..530 100 -> Plus
arm_2L 7351183..7351697 531..1045 100 -> Plus
arm_2L 7351819..7352524 1046..1751 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:47:52 Download gff for IP02564.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7334801..7335105 1..306 99 -> Plus
2L 7342837..7343060 307..530 100 -> Plus
2L 7351183..7351697 531..1045 100 -> Plus
2L 7351819..7352524 1046..1751 100   Plus

IP02564.hyp Sequence

Translation from 244 to 1506

> IP02564.hyp
MRLLMVIAILIFAMPMTGFGWAEGTNILLDPNLMCKKTRRLRGKLAEICR
HDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLRKSMRKILMRDSRET
GFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAE
AALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNR
RPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRR
SDLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFRE
VAGRLRDRYDSARKVTLRNDGNSFMPESPHARPANKYQLVFADDSPDFCT
PNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFK
WCCEVTCEKCLEHRAVNTCL*

IP02564.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:19:21
Subject Length Description Subject Range Query Range Score Percent Strand
Wnt6-PC 420 CG4969-PC 1..420 1..420 2276 100 Plus
Wnt6-PB 420 CG4969-PB 1..420 1..420 2276 100 Plus
Wnt2-PB 325 CG1916-PB 112..324 218..419 488 39.5 Plus
Wnt2-PA 352 CG1916-PA 139..351 218..419 488 39.5 Plus
Wnt10-PB 483 CG4971-PB 69..323 28..322 390 30.7 Plus
Wnt2-PB 325 CG1916-PB 30..112 63..141 163 41 Plus
Wnt2-PA 352 CG1916-PA 57..139 63..141 163 41 Plus

IP02564.pep Sequence

Translation from 244 to 1506

> IP02564.pep
MRLLMVIAILIFAMPMTGFGWAEGTNILLDPNLMCKKTRRLRGKLAEICR
HDSALLKEIIINGINLGFRECEFQFRNRRWNCTVLRKSMRKILMRDSRET
GFVNAITAAGVTYAVTKACTMGQLVECSCDKAHMRRNGGQPQMVTAATAE
AALERQQQAAMLRQQMPLQDQHPSQRLSRMNNASTMTDIAPVEHRGGRNR
RPGGRRGRRKFWDNIKFPEGQWEWGGCSDNVNFGLRHSRVFLDAKQRQRR
SDLGTLVKFHNNNAGRLAIRDAMRLECKCHGLSGSCTVKTCWLKMPPFRE
VAGRLRDRYDSARKVTLRNDGNSFMPESPHARPANKYQLVFADDSPDFCT
PNSKTGALGTQGRECNVTSSGSDRCDRLCCNRGHTRRIVEEQTNCKCVFK
WCCEVTCEKCLEHRAVNTCL*

IP02564.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:33:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15853-PA 444 GF15853-PA 47..444 22..420 1758 85.6 Plus
Dana\GF12469-PA 352 GF12469-PA 139..351 218..419 442 38.4 Plus
Dana\wg-PA 456 GF15852-PA 180..456 222..420 397 34.4 Plus
Dana\GF15854-PA 424 GF15854-PA 10..264 28..322 353 30.7 Plus
Dana\GF14030-PA 544 GF14030-PA 346..534 219..410 269 35 Plus
Dana\wg-PA 456 GF15852-PA 54..177 27..153 196 35.6 Plus
Dana\GF14030-PA 544 GF14030-PA 255..344 32..135 161 36.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:33:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10469-PA 407 GG10469-PA 7..407 22..420 1906 95.8 Plus
Dere\GG24078-PA 352 GG24078-PA 139..351 218..419 457 39.1 Plus
Dere\GG18113-PA 999 GG18113-PA 787..998 195..419 326 33.3 Plus
Dere\wg-PA 468 GG10467-PA 180..294 222..335 296 47.9 Plus
Dere\GG10471-PA 553 GG10471-PA 213..393 98..322 278 32.4 Plus
Dere\wg-PA 468 GG10467-PA 374..468 326..420 231 44.2 Plus
Dere\wg-PA 468 GG10467-PA 54..177 27..153 195 35.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 19:33:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13725-PA 375 GH13725-PA 1..375 34..420 1608 83.2 Plus
Dgri\GH19925-PA 345 GH19925-PA 133..344 218..419 446 40.2 Plus
Dgri\GH13726-PA 460 GH13726-PA 61..443 35..403 411 28 Plus
Dgri\GH21730-PA 991 GH21730-PA 827..990 255..419 339 40 Plus
Dgri\GH13724-PA 472 GH13724-PA 179..290 222..331 286 48.2 Plus
Dgri\GH13724-PA 472 GH13724-PA 378..472 326..420 231 43.2 Plus
Dgri\GH13724-PA 472 GH13724-PA 53..176 27..153 198 36.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:42
Subject Length Description Subject Range Query Range Score Percent Strand
Wnt6-PC 420 CG4969-PC 1..420 1..420 2276 100 Plus
Wnt6-PB 420 CG4969-PB 1..420 1..420 2276 100 Plus
Wnt2-PB 325 CG1916-PB 112..324 218..419 488 39.5 Plus
Wnt2-PA 352 CG1916-PA 139..351 218..419 488 39.5 Plus
Wnt10-PB 483 CG4971-PB 69..323 28..322 390 30.7 Plus
wg-PA 468 CG4889-PA 64..294 41..335 355 31.7 Plus
Wnt5-PB 1004 CG6407-PB 840..1003 255..419 352 38.2 Plus
Wnt5-PA 1004 CG6407-PA 840..1003 255..419 352 38.2 Plus
Wnt4-PB 539 CG4698-PB 344..529 222..410 292 34.5 Plus
Wnt4-PA 539 CG4698-PA 344..529 222..410 292 34.5 Plus
wg-PA 468 CG4889-PA 374..468 326..420 248 44.2 Plus
Wnt10-PB 483 CG4971-PB 392..482 331..419 193 39.6 Plus
Wnt4-PB 539 CG4698-PB 250..339 32..135 168 36.2 Plus
Wnt4-PA 539 CG4698-PA 250..339 32..135 168 36.2 Plus
Wnt2-PB 325 CG1916-PB 30..112 63..141 163 41 Plus
Wnt2-PA 352 CG1916-PA 57..139 63..141 163 41 Plus
wntD-PA 309 CG8458-PA 111..308 226..419 156 24.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 19:33:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23666-PA 427 GI23666-PA 32..427 16..420 1697 83 Plus
Dmoj\GI19882-PA 344 GI19882-PA 134..343 218..419 454 39.2 Plus
Dmoj\GI23686-PA 308 GI23686-PA 9..307 84..419 450 32.4 Plus
Dmoj\GI18872-PA 988 GI18872-PA 824..987 255..419 339 40 Plus
Dmoj\GI23655-PA 473 GI23655-PA 179..294 222..335 283 46.6 Plus
Dmoj\GI23655-PA 473 GI23655-PA 379..473 326..420 232 43.2 Plus
Dmoj\GI23655-PA 473 GI23655-PA 53..176 27..153 201 36.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 19:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18900-PA 402 GL18900-PA 1..402 14..420 1868 86.1 Plus
Dper\GL18902-PA 460 GL18902-PA 41..300 23..322 353 30.5 Plus
Dper\GL16238-PA 379 GL16238-PA 215..378 255..419 351 40.6 Plus
Dper\GL18899-PA 468 GL18899-PA 180..291 222..331 289 48.2 Plus
Dper\GL19231-PA 530 GL19231-PA 335..520 222..410 262 31.5 Plus
Dper\GL18899-PA 468 GL18899-PA 374..468 326..420 229 43.2 Plus
Dper\GL18899-PA 468 GL18899-PA 54..177 27..153 201 36.8 Plus
Dper\GL19231-PA 530 GL19231-PA 241..323 32..129 157 35.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18561-PA 395 GA18561-PA 2..395 22..420 1819 85.8 Plus
Dpse\GA24226-PA 353 GA24226-PA 139..352 218..419 447 38.4 Plus
Dpse\GA18562-PA 489 GA18562-PA 57..329 4..322 357 30.2 Plus
Dpse\wg-PA 468 GA18504-PA 180..291 222..331 289 48.2 Plus
Dpse\GA25881-PA 534 GA25881-PA 339..524 222..410 262 31.5 Plus
Dpse\wg-PA 468 GA18504-PA 374..468 326..420 229 43.2 Plus
Dpse\wg-PA 468 GA18504-PA 54..177 27..153 201 36.8 Plus
Dpse\GA25881-PA 534 GA25881-PA 245..327 32..129 157 35.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16377-PA 338 GM16377-PA 14..338 96..420 1735 98.8 Plus
Dsec\GM21127-PA 352 GM21127-PA 139..351 218..419 457 39.5 Plus
Dsec\GM16392-PA 480 GM16392-PA 48..320 4..322 356 30.2 Plus
Dsec\GM22805-PA 303 GM22805-PA 91..302 195..419 330 33.3 Plus
Dsec\GM16366-PA 468 GM16366-PA 180..294 222..335 296 47.9 Plus
Dsec\GM16366-PA 468 GM16366-PA 374..468 326..420 231 44.2 Plus
Dsec\GM16366-PA 468 GM16366-PA 54..177 27..153 195 35.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\wg-PA 447 GD23460-PA 54..447 27..420 1672 87.2 Plus
Dsim\GD23462-PA 481 GD23462-PA 49..321 4..322 359 30.2 Plus
Dsim\GD15629-PA 969 GD15629-PA 805..968 255..419 326 38.2 Plus
Dsim\GD22501-PA 539 GD22501-PA 344..529 222..410 262 33.5 Plus
Dsim\GD10659-PA 324 GD10659-PA 239..323 335..419 204 41.2 Plus
Dsim\GD22501-PA 539 GD22501-PA 250..339 32..135 161 36.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 19:33:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20859-PA 399 GJ20859-PA 6..399 22..420 1655 84.7 Plus
Dvir\GJ15051-PA 343 GJ15051-PA 133..342 218..419 459 40.1 Plus
Dvir\GJ20870-PA 449 GJ20870-PA 43..297 28..322 355 31 Plus
Dvir\GJ21907-PA 414 GJ21907-PA 250..413 255..419 344 40 Plus
Dvir\wg-PA 472 GJ20848-PA 179..290 222..331 287 48.2 Plus
Dvir\wg-PA 472 GJ20848-PA 378..472 326..420 232 43.2 Plus
Dvir\wg-PA 472 GJ20848-PA 53..176 27..153 198 36.1 Plus
Dvir\GJ20870-PA 449 GJ20870-PA 358..448 331..419 170 38.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 19:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24297-PA 308 GK24297-PA 1..308 89..420 1165 71.4 Plus
Dwil\GK15749-PA 356 GK15749-PA 143..355 222..419 406 36.7 Plus
Dwil\GK24299-PA 457 GK24299-PA 34..288 28..322 343 30 Plus
Dwil\GK21945-PA 997 GK21945-PA 804..996 229..419 333 36.1 Plus
Dwil\wg-PA 477 GK24298-PA 180..276 222..320 282 50.5 Plus
Dwil\wg-PA 477 GK24298-PA 349..477 293..420 239 38.5 Plus
Dwil\wg-PA 477 GK24298-PA 54..177 27..153 202 36.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14461-PA 366 GE14461-PA 6..366 67..420 1645 86.1 Plus
Dyak\GE19281-PA 352 GE19281-PA 139..351 218..419 454 39.1 Plus
Dyak\GE15518-PA 1003 GE15518-PA 839..1002 255..419 322 37.6 Plus
Dyak\GE18366-PA 550 GE18366-PA 355..540 222..410 264 33.5 Plus
Dyak\GE14471-PA 314 GE14471-PA 55..154 221..322 255 44.1 Plus
Dyak\GE18366-PA 550 GE18366-PA 261..350 32..135 161 36.2 Plus