BDGP Sequence Production Resources |
Search the DGRC for IP02578
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 25 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | nmdyn-D6-RA |
Protein status: | IP02578.pep: gold |
Preliminary Size: | 889 |
Sequenced Size: | 1353 |
Gene | Date | Evidence |
---|---|---|
CG5310 | 2005-01-01 | Successful iPCR screen |
nmdyn-D6 | 2008-04-29 | Release 5.5 accounting |
nmdyn-D6 | 2008-08-15 | Release 5.9 accounting |
nmdyn-D6 | 2008-12-18 | 5.12 accounting |
1353 bp (1353 high quality bases) assembled on 2006-01-24
GenBank Submission: BT024430
> IP02578.complete AGCAGGACATGGAAATAACACTCGCTCTGATAAAGCCGCACGTGCTGCGG AATACCTATGCAATGCAGCAGATCCGAGCCCTGATCTCCCAGAACTTCAC CATTCTTGACCAGAAGGAGGTTTGCATTACGAAAGAACTATCTGAGCGAT TTTACGCGGAGCATAAGGGAAAATTCTTCTACCACCGACTAACCAGTTTT ATGAACAGCGGACCCAGCTACGCCCTGATTCTCCAGTCGGAAACCTGCAT CCAGAAGTGGCGCAGTCTTCTGGGTCCCACCAAGGTGTTCCGTGCCGTGT ACAGTGATCCCAACTGCATCCGGGCATTGTACGGAATATCCGACACTCGC AACGCCTGCCATGGATCCGACAGCGAGGCATCCGCCCTCCGCGAGATCAG CATCCTGTTCCCGGAGTTTGACGCGGCTGTTGGGAGTCGCCAGGCGAAAA GGGAGGAGGCGTAGTCGAGGAGTTCTTGATCCTTAGATTGATCAAGATGT CTACTACCAAAGCAGTTCATGAAAAATGTTTACATGTTGTTCAAGTAGCT ATTGGAATTGTCCTAATTTATGTTTCTTATTTTTAATGCCTGGCATTTTT AGATTAGTATTTAGGCTAGACTAGAATGTTGTCATATGGTATGCTTTAAA AGTAATTGAAGTTTATGATACTTTTTGTGACTAGTGTACTAATATGTTTA TATATTTATATATATATATTAGCAAAACAAAAACTATACTTCTTGTTGAT AACTAATAAGAATTAGATGATTAAGGAATTTGGCAATGTTCTTTCGAAAG AAAAATCGCTGTAATAAAAGAAGTCAATTGAAAAGTTAATTTTTTATGAA GTTACTAACAACACCCTGCCGTAGATGGAACTATGGCAATTAACTTGAGA TAACAGCGACATGTGTTTCAAAAACTTTATTTCGTCAATTTCCGGTTTAC ATAATACAATTCTTTTGTTATTAGGTGGTAGGTACATGTATAGATAGAGA TTTTCTTTTCGATTTGCTCTGGTTTCCGTTTAGCTCATTGTAAATAGTTG GTAATAAAATTATAAAATTTATAAACTTAACAAATTATATAAATATATAT ATATTTATGTGTGGGTAAGTTCTGTAGTACGCCTATAAATAGGTAAAGAT ATAAATGTTTTGTATATCGGTTCAGACAATTGAGAAGCATAGCAAGAAAT TCAAAAACGGGAAATATGTCATTAAAAAACTTCAAAATTCTTGTATTTTG TTTGCGAGCGAGACGGCACCTGCGCACCTGCTGTCTTTTTCTAACTCGTG TGCGACGAGTCCTTCACGAATAACAGAAAACTAATGTAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nmdyn-D6-RA | 990 | nmdyn-D6-RA | 154..990 | 1..837 | 4185 | 100 | Plus |
CG9413-RA | 3376 | CG9413-RA | 2936..3376 | 1350..910 | 2190 | 99.7 | Minus |
CG9413-RB | 3492 | CG9413-RB | 3052..3492 | 1350..910 | 2190 | 99.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
invader4 | 3105 | invader4 INVADER4 3105bp | 2562..2655 | 750..844 | 120 | 65.3 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 6372..6460 | 721..634 | 118 | 62.2 | Minus |
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 5895..6105 | 1038..1247 | 113 | 58 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 807..998 | 706..523 | 112 | 56.4 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 14475245..14475473 | 1109..1337 | 100 | Plus | |
chrX | 14474061..14474268 | 1..208 | 100 | -> | Plus |
chrX | 14474345..14475187 | 209..1051 | 97 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 1..456 | 9..464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 1..456 | 9..464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 1..456 | 9..464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 1..456 | 9..464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 1..456 | 9..464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 53..889 | 1..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 69..864 | 1..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 69..864 | 1..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 53..889 | 1..837 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
nmdyn-D6-RA | 69..864 | 1..796 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14583745..14583952 | 1..208 | 100 | -> | Plus |
X | 14584029..14585157 | 209..1337 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14583745..14583952 | 1..208 | 100 | -> | Plus |
X | 14584029..14585157 | 209..1337 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14583745..14583952 | 1..208 | 100 | -> | Plus |
X | 14584029..14585157 | 209..1337 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 14477778..14477985 | 1..208 | 100 | -> | Plus |
arm_X | 14478062..14479190 | 209..1337 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 14592127..14593255 | 209..1337 | 100 | Plus | |
X | 14591843..14592050 | 1..208 | 100 | -> | Plus |
Translation from 2 to 463
> IP02578.hyp QDMEITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERF YAEHKGKFFYHRLTSFMNSGPSYALILQSETCIQKWRSLLGPTKVFRAVY SDPNCIRALYGISDTRNACHGSDSEASALREISILFPEFDAAVGSRQAKR EEA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nmdyn-D6-PA | 151 | CG5310-PA | 1..151 | 3..153 | 776 | 100 | Plus |
awd-PE | 153 | CG2210-PE | 6..148 | 4..149 | 156 | 29.5 | Plus |
awd-PD | 168 | CG2210-PD | 21..163 | 4..149 | 156 | 29.5 | Plus |
awd-PC | 168 | CG2210-PC | 21..163 | 4..149 | 156 | 29.5 | Plus |
Translation from 8 to 463
> IP02578.pep MEITLALIKPHVLRNTYAMQQIRALISQNFTILDQKEVCITKELSERFYA EHKGKFFYHRLTSFMNSGPSYALILQSETCIQKWRSLLGPTKVFRAVYSD PNCIRALYGISDTRNACHGSDSEASALREISILFPEFDAAVGSRQAKREE A*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22564-PA | 150 | GF22564-PA | 1..149 | 1..149 | 689 | 83.9 | Plus |
Dana\GF22983-PA | 152 | GF22983-PA | 5..136 | 2..136 | 170 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17849-PA | 150 | GG17849-PA | 1..149 | 1..149 | 769 | 95.3 | Plus |
Dere\GG11858-PA | 172 | GG11858-PA | 25..167 | 2..147 | 172 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11937-PA | 153 | GH11937-PA | 1..152 | 1..151 | 620 | 75 | Plus |
Dgri\GH18934-PA | 153 | GH18934-PA | 6..148 | 2..147 | 173 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
nmdyn-D6-PA | 151 | CG5310-PA | 1..151 | 1..151 | 776 | 100 | Plus |
awd-PE | 153 | CG2210-PE | 6..148 | 2..147 | 156 | 29.5 | Plus |
awd-PD | 168 | CG2210-PD | 21..163 | 2..147 | 156 | 29.5 | Plus |
awd-PC | 168 | CG2210-PC | 21..163 | 2..147 | 156 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14139-PA | 158 | GI14139-PA | 1..147 | 1..147 | 575 | 70.1 | Plus |
Dmoj\GI24450-PA | 153 | GI24450-PA | 6..148 | 2..147 | 167 | 28.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20145-PA | 152 | GL20145-PA | 3..151 | 2..149 | 652 | 79.9 | Plus |
Dper\GL23527-PA | 153 | GL23527-PA | 6..148 | 2..147 | 172 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18797-PA | 152 | GA18797-PA | 3..151 | 2..149 | 662 | 81.2 | Plus |
Dpse\GA27289-PA | 153 | GA27289-PA | 6..148 | 2..147 | 172 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17681-PA | 151 | GM17681-PA | 1..151 | 1..151 | 780 | 94 | Plus |
Dsec\GM16421-PA | 153 | GM16421-PA | 6..148 | 2..147 | 172 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17175-PA | 151 | GD17175-PA | 1..151 | 1..151 | 785 | 94.7 | Plus |
Dsim\GD16337-PA | 172 | GD16337-PA | 25..167 | 2..147 | 171 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19086-PA | 147 | GJ19086-PA | 1..138 | 1..138 | 587 | 76.1 | Plus |
Dvir\GJ24119-PA | 153 | GJ24119-PA | 6..137 | 2..136 | 172 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14697-PA | 152 | GK14697-PA | 1..138 | 1..138 | 608 | 77.5 | Plus |
Dwil\GK19226-PA | 139 | GK19226-PA | 6..133 | 4..134 | 184 | 32.8 | Plus |
Dwil\GK10972-PA | 153 | GK10972-PA | 6..137 | 2..136 | 170 | 30.4 | Plus |