Clone IP02593 Report

Search the DGRC for IP02593

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:25
Well:93
Vector:pOT2
Associated Gene/TranscriptDesat2-RA
Protein status:IP02593.pep: gold
Preliminary Size:1086
Sequenced Size:1375

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5925 2005-01-01 Successful iPCR screen
desat2 2008-04-29 Release 5.5 accounting
desat2 2008-08-15 Release 5.9 accounting
desat2 2008-12-18 5.12 accounting

Clone Sequence Records

IP02593.complete Sequence

1375 bp (1375 high quality bases) assembled on 2006-01-26

GenBank Submission: BT024427

> IP02593.complete
TGAGATTCGGTCGGGCCAAGAACCAAGATTGCATCGTGCAAGGATATCAA
TCAAATTATTCGAGAAAGGATAAGGACCGTTCCCTGAACATTAAAATTGA
TAAGGACTGTTAACTTAAATACGATAAGGATAATAGTGCTAAGTGGTTGA
GTGCAGTGAAAGAAAGTGACGATATGGCGCCCTACTCAAGGATATACCAT
CAGGATAAGTCCTCCAGAGAAACGGGTGTCCTTTTCGAGGACGATGCGCA
AACAGTCGACGGTGACCTGACCACCGACAGATTCCAGTTGAAACGAGCTG
AGAAGCGTCGGCTACCCCTAGTCTGGCGGAATATAATCCTGTTCGCATTG
GTCCACCTGGCTGCTCTATATGGCCTGCACTCCATATTCACAAGGGCGAA
ACTGGCAACCACACTTTTCGCTGCCGGATTGTATATCATTGGCATGCTGG
GCGTTACAGCCGGTGCCCATCGTCTATGGGCGCATCGCACCTACAAGGCC
AAGTGGCCCCTGCGCCTGCTCCTGGTCATCTTCAATACGATCGCCTTTCA
GGATGCCGTCTACCATTGGGCCCGTGACCATCGCGTCCACCACAAATACT
CGGAAACTGATGCAGATCCTCACAACGCCACCAGGGGATTTTTCTTCTCG
CATGTGGGCTGGCTGCTCTGCAAAAAGCATCCGGATATTAAGGAAAAGGG
AAGGGGACTGGATCTCTCCGACCTGCGCGCCGATCCCATCTTGATGTTCC
AACGAAAGCACTATTATATCCTCATGCCGCTGGCCTGCTTCGTTCTGCCC
ACCGTTATTCCAATGGTTTACTGGAATGAGACGCTGGCCTCCTCTTGGTT
TGTGGCCACCATGTTCAGGTGGTGCTTCCAGCTAAACATGACCTGGCTGG
TGAACAGCGCGGCCCATAAATTCGGAAATCGCCCATACGACAAGACCATG
AATCCTACCCAGAATGCCTTTGTATCGGCCTTCACCTTTGGCGAGGGGTG
GCACAACTACCATCACGCGTTTCCGTGGGACTACAAGACGGCCGAATGGG
GTTGCTACTCCCTGAATATAACGACGGCCTTCATCGACTTGTTCGCCAAG
ATCGGCTGGGCCTACGACCTGAAGACGGTGGCTCCCGACGTGATCCAGCG
ACGAGTGCTCCGCACTGGCGACGGTAGCCACGAACTGTGGGGCTGGGGCG
ATAAGGACCTGACAGCGGAGGATGCCAGGAACGTGCTCCTTGTGGATAAA
AGTAGATGACGATTGATCTAGTACTCTTAAATGAAAAACTTATTAAGTAC
AAACTTTAAGCGATTTCGGCTAAGATTAAATATATTGATCGGTAATATTC
TAAAAGGAAAAAAAAAAAAAAAAAA

IP02593.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:19:26
Subject Length Description Subject Range Query Range Score Percent Strand
desat2-RA 1381 desat2-RA 22..1381 1..1360 6800 100 Plus
CG17207.a 1642 CG17207.a 1263..1557 1238..944 1475 100 Minus
desat1-RE 1956 desat1-RE 469..770 450..751 865 85.7 Plus
CG17207.a 1642 CG17207.a 1207..1263 1360..1304 285 100 Minus
desat1-RE 1956 desat1-RE 1096..1149 1077..1130 225 94.4 Plus
desat1-RE 1956 desat1-RE 865..944 846..925 205 83.7 Plus
desat1-RE 1956 desat1-RE 1004..1064 985..1045 200 88.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:09:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8262830..8263243 944..1357 2070 100 Plus
chr3R 27901430 chr3R 8261642..8262053 9..420 2030 99.5 Plus
chr3R 27901430 chr3R 8262119..8262457 420..758 1695 100 Plus
chr3R 27901430 chr3R 8262575..8262761 758..944 935 100 Plus
chr3R 27901430 chr3R 8271383..8271684 450..751 850 85.4 Plus
chr3R 27901430 chr3R 8272040..8272185 985..1130 370 83.6 Plus
chr3R 27901430 chr3R 26009171..26009294 665..542 275 81.5 Minus
chr3L 24539361 chr3L 11014772..11014848 543..619 235 87 Plus
chr3R 27901430 chr3R 8271840..8271938 846..944 210 80.8 Plus
chr3R 27901430 chr3R 26019345..26019449 1097..993 195 79 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:35:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:09:50
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12436248..12436667 1..420 2100 100 Plus
3R 32079331 3R 12437444..12437860 944..1360 2085 100 Plus
3R 32079331 3R 12436733..12437071 420..758 1695 100 Plus
3R 32079331 3R 12437189..12437375 758..944 935 100 Plus
3R 32079331 3R 12446007..12446308 450..751 865 85.8 Plus
3R 32079331 3R 12446664..12446809 985..1130 370 83.6 Plus
3L 28110227 3L 11023789..11023960 448..619 275 77.3 Plus
3R 32079331 3R 30186709..30186831 664..542 270 81.3 Minus
3R 32079331 3R 12446464..12446562 846..944 210 80.8 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:12:18
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12177079..12177498 1..420 2100 100 Plus
3R 31820162 3R 12178275..12178691 944..1360 2085 100 Plus
3R 31820162 3R 12177564..12177902 420..758 1695 100 Plus
3R 31820162 3R 12178020..12178206 758..944 935 100 Plus
3R 31820162 3R 12186838..12187139 450..751 865 85.7 Plus
3R 31820162 3R 29927540..29927662 664..542 270 81.3 Minus
3L 28103327 3L 11016984..11017060 543..619 265 89.6 Plus
3R 31820162 3R 12187587..12187640 1077..1130 225 94.4 Plus
3R 31820162 3R 12187295..12187393 846..944 210 80.8 Plus
3R 31820162 3R 12187495..12187555 985..1045 200 88.5 Plus
3R 31820162 3R 13023726..13023845 567..686 150 75 Plus
3R 31820162 3R 13024356..13024411 990..1045 145 83.9 Plus
3R 31820162 3R 29927021..29927067 1036..990 145 87.2 Minus
Blast to na_te.dros performed on 2019-03-16 17:09:50 has no hits.

IP02593.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:10:32 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8261636..8262053 1..420 99 -> Plus
chr3R 8262120..8262456 421..757 100 -> Plus
chr3R 8262575..8262760 758..943 100 -> Plus
chr3R 8262830..8263243 944..1357 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:18:09 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
desat2-RA 1..1086 174..1259 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:34:09 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
desat2-RA 1..1086 174..1259 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:52:30 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
desat2-RA 1..1086 174..1259 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:08:19 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
desat2-RA 1..1086 174..1259 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:53:09 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
Desat2-RA 1..1086 174..1259 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:05:31 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
desat2-RA 1..1357 1..1357 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:34:09 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
desat2-RA 1..1357 1..1357 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:52:30 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
desat2-RA 1..1357 1..1357 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:08:20 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
desat2-RA 1..1357 1..1357 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:53:09 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
Desat2-RA 1..1357 1..1357 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:10:32 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12436248..12436667 1..420 100 -> Plus
3R 12436734..12437070 421..757 100 -> Plus
3R 12437189..12437374 758..943 100 -> Plus
3R 12437444..12437857 944..1357 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:10:32 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12436248..12436667 1..420 100 -> Plus
3R 12436734..12437070 421..757 100 -> Plus
3R 12437189..12437374 758..943 100 -> Plus
3R 12437444..12437857 944..1357 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:10:32 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12436248..12436667 1..420 100 -> Plus
3R 12436734..12437070 421..757 100 -> Plus
3R 12437189..12437374 758..943 100 -> Plus
3R 12437444..12437857 944..1357 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:52:30 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8261970..8262389 1..420 100 -> Plus
arm_3R 8262456..8262792 421..757 100 -> Plus
arm_3R 8262911..8263096 758..943 100 -> Plus
arm_3R 8263166..8263579 944..1357 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:58:21 Download gff for IP02593.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12177079..12177498 1..420 100 -> Plus
3R 12177565..12177901 421..757 100 -> Plus
3R 12178020..12178205 758..943 100 -> Plus
3R 12178275..12178688 944..1357 100   Plus

IP02593.pep Sequence

Translation from 173 to 1258

> IP02593.pep
MAPYSRIYHQDKSSRETGVLFEDDAQTVDGDLTTDRFQLKRAEKRRLPLV
WRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHR
LWAHRTYKAKWPLRLLLVIFNTIAFQDAVYHWARDHRVHHKYSETDADPH
NATRGFFFSHVGWLLCKKHPDIKEKGRGLDLSDLRADPILMFQRKHYYIL
MPLACFVLPTVIPMVYWNETLASSWFVATMFRWCFQLNMTWLVNSAAHKF
GNRPYDKTMNPTQNAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNIT
TAFIDLFAKIGWAYDLKTVAPDVIQRRVLRTGDGSHELWGWGDKDLTAED
ARNVLLVDKSR*

IP02593.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:13:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17959-PA 374 GF17959-PA 24..372 10..359 1525 78 Plus
Dana\GF17961-PA 383 GF17961-PA 37..380 16..359 1397 71.2 Plus
Dana\GF17960-PA 384 GF17960-PA 1..367 1..361 1376 66.3 Plus
Dana\GF24026-PA 355 GF24026-PA 4..353 12..361 1156 57.1 Plus
Dana\GF16174-PA 355 GF16174-PA 4..342 12..350 1153 59.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:13:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18949-PA 383 GG18949-PA 37..380 16..359 1376 70.6 Plus
Dere\GG15465-PA 354 GG15465-PA 3..343 11..351 1094 56.3 Plus
Dere\GG19533-PA 407 GG19533-PA 46..401 36..360 946 46.6 Plus
Dere\GG11952-PA 419 GG11952-PA 102..410 51..350 790 49 Plus
Dere\GG11954-PA 461 GG11954-PA 106..395 48..336 769 49.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:13:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21218-PA 382 GH21218-PA 32..376 13..357 1437 74.5 Plus
Dgri\GH21229-PA 384 GH21229-PA 38..381 16..359 1390 70.6 Plus
Dgri\GH18426-PA 414 GH18426-PA 54..409 38..361 954 46.9 Plus
Dgri\GH18424-PA 475 GH18424-PA 116..407 46..336 827 50.3 Plus
Dgri\GH18422-PA 422 GH18422-PA 70..413 15..350 795 44.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:08:26
Subject Length Description Subject Range Query Range Score Percent Strand
Desat2-PA 361 CG5925-PA 1..361 1..361 1975 100 Plus
Desat1-PD 383 CG5887-PD 38..380 17..359 1405 71.4 Plus
Desat1-PB 383 CG5887-PB 38..380 17..359 1405 71.4 Plus
Desat1-PE 383 CG5887-PE 38..380 17..359 1405 71.4 Plus
Desat1-PC 383 CG5887-PC 38..380 17..359 1405 71.4 Plus
Desat1-PA 383 CG5887-PA 38..380 17..359 1405 71.4 Plus
Fad2-PA 355 CG7923-PA 9..342 17..350 1134 56.9 Plus
CG8630-PA 408 CG8630-PA 60..401 47..359 957 48 Plus
CG9743-PA 420 CG9743-PA 90..411 38..350 824 47.7 Plus
CG9747-PB 461 CG9747-PB 106..395 48..336 809 49 Plus
CG9747-PA 461 CG9747-PA 106..395 48..336 809 49 Plus
CG15531-PA 334 CG15531-PA 23..295 50..326 447 33.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:13:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10484-PA 367 GI10484-PA 18..363 13..358 1493 76.3 Plus
Dmoj\GI10485-PA 384 GI10485-PA 38..381 16..359 1401 70.9 Plus
Dmoj\GI24327-PA 424 GI24327-PA 70..419 42..361 956 48.3 Plus
Dmoj\GI24325-PA 469 GI24325-PA 116..405 48..337 843 51.5 Plus
Dmoj\GI24323-PA 418 GI24323-PA 62..409 14..350 825 45 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:13:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27314-PA 380 GL27314-PA 28..377 10..359 1571 79.4 Plus
Dper\GL27316-PA 383 GL27316-PA 37..380 16..359 1370 70.3 Plus
Dper\GL15830-PA 379 GL15830-PA 39..378 14..361 1288 67 Plus
Dper\GL23117-PA 362 GL23117-PA 1..360 1..361 1116 54.7 Plus
Dper\GL15669-PA 353 GL15669-PA 11..349 17..361 1090 56.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:13:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\Desat2-PA 380 GA19234-PA 28..377 10..359 1575 79.7 Plus
Dpse\Desat1-PA 383 GA19204-PA 37..380 16..359 1369 70.3 Plus
Dpse\GA23412-PA 379 GA23412-PA 39..378 14..361 1287 67 Plus
Dpse\DesatF-beta-PA 362 GA27148-PA 1..360 1..361 1110 54.1 Plus
Dpse\DesatF-alpha-PA 353 GA20691-PA 11..349 17..361 1090 56.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:13:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24035-PA 361 GM24035-PA 1..361 1..361 1887 97.5 Plus
Dsec\GM24036-PA 402 GM24036-PA 37..312 16..291 1146 73.6 Plus
Dsec\GM25238-PA 354 GM25238-PA 9..342 17..351 1105 57.3 Plus
Dsec\GM24094-PA 408 GM24094-PA 46..402 40..360 944 46.8 Plus
Dsec\GM12168-PA 420 GM12168-PA 103..411 51..350 786 49 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:13:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\desat2-PA 361 GD18836-PA 1..361 1..361 1896 97.8 Plus
Dsim\Fad-PA 383 GD18837-PA 37..380 16..359 1372 70.6 Plus
Dsim\GD14271-PA 355 GD14271-PA 4..343 12..351 1115 57.1 Plus
Dsim\GD18893-PA 408 GD18893-PA 46..402 40..360 944 46.8 Plus
Dsim\GD17212-PA 420 GD17212-PA 103..411 51..350 786 49 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:13:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23165-PA 381 GJ23165-PA 32..378 13..359 1432 76.1 Plus
Dvir\GJ23166-PA 384 GJ23166-PA 38..381 16..359 1394 71.2 Plus
Dvir\GJ10413-PA 420 GJ10413-PA 57..413 34..359 935 46.5 Plus
Dvir\GJ10410-PA 466 GJ10410-PA 111..402 46..336 832 50.7 Plus
Dvir\GJ10408-PA 422 GJ10408-PA 68..413 14..350 802 45.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:13:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14406-PA 374 GK14406-PA 22..371 10..359 1514 77.4 Plus
Dwil\GK14407-PA 383 GK14407-PA 37..380 16..359 1391 71.8 Plus
Dwil\GK17186-PA 363 GK17186-PA 18..358 17..357 1140 60.4 Plus
Dwil\GK11373-PA 357 GK11373-PA 1..357 1..358 1029 52.1 Plus
Dwil\GK13932-PA 415 GK13932-PA 66..409 46..360 925 47.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:13:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE26197-PA 358 GE26197-PA 1..356 1..359 1773 91.1 Plus
Dyak\desat1-PA 383 GE26198-PA 37..380 16..359 1368 70.1 Plus
Dyak\GE21776-PA 340 GE21776-PA 9..329 17..351 990 53.4 Plus
Dyak\GE26257-PA 408 GE26257-PA 46..402 40..360 946 46.8 Plus
Dyak\GE23403-PA 461 GE23403-PA 106..395 48..336 790 49 Plus

IP02593.hyp Sequence

Translation from 173 to 1258

> IP02593.hyp
MAPYSRIYHQDKSSRETGVLFEDDAQTVDGDLTTDRFQLKRAEKRRLPLV
WRNIILFALVHLAALYGLHSIFTRAKLATTLFAAGLYIIGMLGVTAGAHR
LWAHRTYKAKWPLRLLLVIFNTIAFQDAVYHWARDHRVHHKYSETDADPH
NATRGFFFSHVGWLLCKKHPDIKEKGRGLDLSDLRADPILMFQRKHYYIL
MPLACFVLPTVIPMVYWNETLASSWFVATMFRWCFQLNMTWLVNSAAHKF
GNRPYDKTMNPTQNAFVSAFTFGEGWHNYHHAFPWDYKTAEWGCYSLNIT
TAFIDLFAKIGWAYDLKTVAPDVIQRRVLRTGDGSHELWGWGDKDLTAED
ARNVLLVDKSR*

IP02593.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
Desat2-PA 361 CG5925-PA 1..361 1..361 1975 100 Plus
Desat1-PD 383 CG5887-PD 38..380 17..359 1405 71.4 Plus
Desat1-PB 383 CG5887-PB 38..380 17..359 1405 71.4 Plus
Desat1-PE 383 CG5887-PE 38..380 17..359 1405 71.4 Plus
Desat1-PC 383 CG5887-PC 38..380 17..359 1405 71.4 Plus