Clone IP02648 Report

Search the DGRC for IP02648

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:26
Well:48
Vector:pOT2
Associated Gene/Transcriptwbl-RA
Protein status:IP02648.pep: gold
Preliminary Size:950
Sequenced Size:953

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7225 2005-01-01 Successful iPCR screen
wbl 2008-04-29 Release 5.5 accounting
wbl 2008-08-15 Release 5.9 accounting
wbl 2008-12-18 5.12 accounting

Clone Sequence Records

IP02648.complete Sequence

953 bp (953 high quality bases) assembled on 2005-03-01

GenBank Submission: BT023269

> IP02648.complete
GCAAGAGTAGGGTCAAGTTCAGAAGTCTCTGGTTTTTGCCACGAAGATGA
TGCATATTTTGGTGACTCTGCTCCTGGTCGCTATCCACTCGATACCCACC
ACCTGGGCCGTCACCTGCACGGGCTGCGTGGATCTGGATGAGCTGAGTTT
CGAGAAGACGGTGGAACGATTTCCCTACTCCGTAGTGAAATTTGATATCG
CATATCCGTATGGGGAAAAGCATGAGGCCTTTACCGCCTTCTCCAAATCT
GCCCACAAGGCAACTAAAGATCTGCTAATAGCCACCGTGGGTGTCAAGGA
CTATGGAGAACTGGAGAACAAGGCCCTGGGCGACCGTTACAAAGTCGACG
ACAAGAACTTCCCGAGTATCTTCCTGTTCAAGGGCAACGCTGATGAGTAC
GTCCAGCTTCCTAGCCACGTCGACGTAACGCTGGACAATCTGAAGGCTTT
TGTCAGTGCCAACACACCTCTGTACATCGGTCGTGATGGCTGCATCAAAG
AGTTCAACGAAGTGCTCAAGAACTATGCCAATATCCCCGATGCAGAGCAA
CTGAAGCTTATCGAAAAGCTGCAGGCCAAGCAGGAGCAGCTGACCGATCC
CGAGCAGCAGCAGAACGCCAGGGCCTATCTGATCTACATGCGGAAGATCC
ACGAGGTGGGCTACGATTTCCTGGAGGAGGAGACCAAGCGACTCCTGCGC
CTCAAGGCCGGCAAGGTCACCGAGGCCAAGAAGGAGGAGCTGCTGAGGAA
ACTGAACATCCTGGAAGTCTTCAGGGTTCACAAGGTCACCAAGACAGCGC
CGGAAAAGGAGGAACTGTGAACTTGTTAGATCTTTAAACAAAATTATGAA
TACTTTATGATATTTATAAATGTCGGATCTCGACAGAAACATGTGAATGT
ACAATTTATACGAATTATAAGTCTATCATCCAAATAAAAAAAAAAAAAAA
AAA

IP02648.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:54:15
Subject Length Description Subject Range Query Range Score Percent Strand
wbl-RA 1382 wbl-RA 406..1343 1..938 4690 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 15137475..15138089 321..935 3060 99.8 Plus
chr2R 21145070 chr2R 15136951..15137273 1..323 1615 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:35:18 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:28:30
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19250303..19250920 321..938 3090 100 Plus
2R 25286936 2R 19249779..19250101 1..323 1615 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:43:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 19251502..19252119 321..938 3090 100 Plus
2R 25260384 2R 19250978..19251300 1..323 1615 100 Plus
Blast to na_te.dros performed 2019-03-16 06:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2754..2867 515..627 151 65.8 Plus

IP02648.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:29:37 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 15136951..15137272 1..322 100 -> Plus
chr2R 15137477..15138089 323..935 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:18:16 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 1..774 47..820 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:26:48 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 1..774 47..820 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:00:07 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 1..774 47..820 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:10:52 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 1..774 47..820 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:20:55 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 1..774 47..820 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:29:47 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 19..950 1..932 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:26:48 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 19..950 1..932 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:07 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 19..953 1..935 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:10:52 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 19..950 1..932 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:20:55 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
wbl-RA 19..953 1..935 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:29:37 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19249779..19250100 1..322 100 -> Plus
2R 19250305..19250917 323..935 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:29:37 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19249779..19250100 1..322 100 -> Plus
2R 19250305..19250917 323..935 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:29:37 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19249779..19250100 1..322 100 -> Plus
2R 19250305..19250917 323..935 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:07 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15137284..15137605 1..322 100 -> Plus
arm_2R 15137810..15138422 323..935 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:47:22 Download gff for IP02648.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19250978..19251299 1..322 100 -> Plus
2R 19251504..19252116 323..935 100   Plus

IP02648.pep Sequence

Translation from 46 to 819

> IP02648.pep
MMHILVTLLLVAIHSIPTTWAVTCTGCVDLDELSFEKTVERFPYSVVKFD
IAYPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKV
DDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCI
KEFNEVLKNYANIPDAEQLKLIEKLQAKQEQLTDPEQQQNARAYLIYMRK
IHEVGYDFLEEETKRLLRLKAGKVTEAKKEELLRKLNILEVFRVHKVTKT
APEKEEL*

IP02648.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:22:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11580-PA 257 GF11580-PA 1..257 1..257 1088 76.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:22:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21954-PA 257 GG21954-PA 1..257 1..257 1277 92.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23094-PA 258 GH23094-PA 20..253 17..250 919 67.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:57
Subject Length Description Subject Range Query Range Score Percent Strand
wbl-PB 257 CG7225-PB 1..257 1..257 1320 100 Plus
wbl-PA 257 CG7225-PA 1..257 1..257 1320 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:22:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18919-PA 259 GI18919-PA 18..254 19..254 911 69.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:22:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17639-PA 261 GL17639-PA 1..255 1..255 1012 70.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23336-PA 261 GA23336-PA 1..255 1..255 1015 70.6 Plus
Dpse\GA20194-PA 245 GA20194-PA 1..239 1..255 911 65.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM21940-PA 257 GM21940-PA 1..257 1..257 1341 98.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11437-PA 257 GD11437-PA 1..257 1..257 1345 98.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:22:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19774-PA 258 GJ19774-PA 18..253 19..254 926 70.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20670-PA 263 GK20670-PA 20..258 18..256 930 69.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:22:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12027-PA 257 GE12027-PA 1..257 1..257 1276 92.2 Plus

IP02648.hyp Sequence

Translation from 46 to 819

> IP02648.hyp
MMHILVTLLLVAIHSIPTTWAVTCTGCVDLDELSFEKTVERFPYSVVKFD
IAYPYGEKHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKV
DDKNFPSIFLFKGNADEYVQLPSHVDVTLDNLKAFVSANTPLYIGRDGCI
KEFNEVLKNYANIPDAEQLKLIEKLQAKQEQLTDPEQQQNARAYLIYMRK
IHEVGYDFLEEETKRLLRLKAGKVTEAKKEELLRKLNILEVFRVHKVTKT
APEKEEL*

IP02648.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:52:04
Subject Length Description Subject Range Query Range Score Percent Strand
wbl-PB 257 CG7225-PB 1..257 1..257 1320 100 Plus
wbl-PA 257 CG7225-PA 1..257 1..257 1320 100 Plus