BDGP Sequence Production Resources |
Search the DGRC for IP02720
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 27 |
Well: | 20 |
Vector: | pOT2 |
Associated Gene/Transcript | lush-RA |
Protein status: | IP02720.pep: gold |
Preliminary Size: | 964 |
Sequenced Size: | 965 |
Gene | Date | Evidence |
---|---|---|
CG8807 | 2005-01-01 | Successful iPCR screen |
lush | 2008-04-29 | Release 5.5 accounting |
lush | 2008-08-15 | Release 5.9 accounting |
lush | 2008-12-18 | 5.12 accounting |
965 bp (965 high quality bases) assembled on 2006-01-24
GenBank Submission: BT024426
> IP02720.complete CTTGCACATCAAAGTAGTATCTCCATAATTCGACTATTGTCGTGTCATTC AAATGGTACAAATACAACTTCCTAGTCAACTCAAATGGCGTGCGAGTGCG TTACTTAATTATTAATCCCTGCGATTTAATTACCACCTTTCCCTGCCATC ATGATCACCTATAAAACTCTCCTACGACATGGTTACTCAACGTATTTAGC TTTCCGCCACCATGAAGCATTGGAAACGACGCTCTTCCGCTGTTTTCGCG ATCGTCCTGCAAGTGCTGGTACTCCTGCTACCCGATCCTGCAGTTGCCAT GACGATGGAGCAGTTCTTGACCTCGCTAGACATGATCCGCAGTGGCTGTG CGCCGAAGTTTAAGCTCAAAACAGAAGATCTCGATCGGCTTCGCGTGGGT GATTTCAACTTTCCGCCATCGCAGGATCTTATGTGCTACACAAAGTGTGT GTCCTTGATGGCGGGCACTGTGAACAAAAAGGGGGAGTTCAACGCTCCCA AGGCGCTGGCCCAACTTCCGCATCTGGTTCCCCCGGAAATGATGGAGATG TCCAGGAAATCCGTTGAAGCTTGTCGGGATACGCATAAACAATTTAAGGA ATCTTGCGAGAGGGTCTACCAGACGGCCAAGTGCTTCTCTGAAAACGCCG ATGGGCAGTTCATGTGGCCTTAAAAATGTTTCTGGAAACTAAATTCATAC TGGTTCATCCTTTAATGACCAATCCTTGGATGATTGCTTTATTATCTATG TTGAAATCATAAAATAGAATTGGAATTCGTAAAACATAAATTATGACAAG AAAGGAAGTTAGCTTCAAAAAGCCGAAGTATATACTTATATACCCTTGCA GTAATATGATGTTGATTAAATTGAAACCAAAATTTATATATTAAAGACAA CTTATGTATACAGAATAACATCAATTTATGATTAAAAACGAAAAAAAAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19594411..19594827 | 433..17 | 2070 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 19593789..19594144 | 940..585 | 1735 | 99.2 | Minus |
chr3L | 24539361 | chr3L | 19594201..19594356 | 588..433 | 750 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19605030..19605446 | 433..17 | 2025 | 99 | Minus |
3L | 28110227 | 3L | 19604407..19604763 | 941..585 | 1770 | 99.7 | Minus |
3L | 28110227 | 3L | 19604820..19604975 | 588..433 | 750 | 98.7 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19598130..19598546 | 433..17 | 2025 | 99 | Minus |
3L | 28103327 | 3L | 19597507..19597863 | 941..585 | 1770 | 99.7 | Minus |
3L | 28103327 | 3L | 19597920..19598075 | 588..433 | 750 | 98.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19593789..19594144 | 585..940 | 99 | <- | Minus |
chr3L | 19594205..19594355 | 434..584 | 99 | <- | Minus |
chr3L | 19594411..19594827 | 17..433 | 99 | <- | Minus |
chr3L | 19595337..19595352 | 1..16 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RA | 1..462 | 212..673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RB | 1..462 | 212..673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RA | 1..462 | 212..673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RA | 1..462 | 212..673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RA | 1..462 | 212..673 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RA | 30..953 | 17..940 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RB | 1..940 | 1..940 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RB | 1..940 | 1..940 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RA | 30..953 | 17..940 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lush-RB | 1..940 | 1..940 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19604408..19604763 | 585..940 | 99 | <- | Minus |
3L | 19604824..19604974 | 434..584 | 99 | <- | Minus |
3L | 19605030..19605446 | 17..433 | 99 | <- | Minus |
3L | 19605956..19605971 | 1..16 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19604408..19604763 | 585..940 | 99 | <- | Minus |
3L | 19604824..19604974 | 434..584 | 99 | <- | Minus |
3L | 19605030..19605446 | 17..433 | 99 | <- | Minus |
3L | 19605956..19605971 | 1..16 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19604408..19604763 | 585..940 | 99 | <- | Minus |
3L | 19604824..19604974 | 434..584 | 99 | <- | Minus |
3L | 19605030..19605446 | 17..433 | 99 | <- | Minus |
3L | 19605956..19605971 | 1..16 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19597508..19597863 | 585..940 | 99 | <- | Minus |
arm_3L | 19597924..19598074 | 434..584 | 99 | <- | Minus |
arm_3L | 19598130..19598546 | 17..433 | 99 | <- | Minus |
arm_3L | 19599056..19599071 | 1..16 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19597508..19597863 | 585..940 | 99 | <- | Minus |
3L | 19597924..19598074 | 434..584 | 99 | <- | Minus |
3L | 19598130..19598546 | 17..433 | 99 | <- | Minus |
3L | 19599056..19599071 | 1..16 | 100 | Minus |
Translation from 211 to 672
> IP02720.hyp MKHWKRRSSAVFAIVLQVLVLLLPDPAVAMTMEQFLTSLDMIRSGCAPKF KLKTEDLDRLRVGDFNFPPSQDLMCYTKCVSLMAGTVNKKGEFNAPKALA QLPHLVPPEMMEMSRKSVEACRDTHKQFKESCERVYQTAKCFSENADGQF MWP*
Translation from 211 to 672
> IP02720.pep MKHWKRRSSAVFAIVLQVLVLLLPDPAVAMTMEQFLTSLDMIRSGCAPKF KLKTEDLDRLRVGDFNFPPSQDLMCYTKCVSLMAGTVNKKGEFNAPKALA QLPHLVPPEMMEMSRKSVEACRDTHKQFKESCERVYQTAKCFSENADGQF MWP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10723-PA | 147 | GF10723-PA | 1..147 | 1..153 | 501 | 56.9 | Plus |
Dana\GF19415-PA | 150 | GF19415-PA | 8..150 | 11..153 | 150 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13391-PA | 153 | GG13391-PA | 1..153 | 1..153 | 731 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23896-PA | 157 | GH23896-PA | 27..157 | 23..153 | 346 | 46.6 | Plus |
Dgri\GH14624-PA | 157 | GH14624-PA | 27..157 | 23..153 | 346 | 46.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lush-PB | 153 | CG8807-PB | 1..153 | 1..153 | 810 | 100 | Plus |
lush-PA | 153 | CG8807-PA | 1..153 | 1..153 | 810 | 100 | Plus |
Obp19a-PC | 146 | CG11748-PC | 17..139 | 23..145 | 148 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13512-PA | 157 | GI13512-PA | 33..157 | 29..153 | 337 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20882-PA | 155 | GL20882-PA | 1..155 | 1..153 | 452 | 56.1 | Plus |
Dper\GL26840-PA | 145 | GL26840-PA | 7..145 | 14..153 | 136 | 26.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Obp76a-PA | 155 | GA21335-PA | 1..155 | 1..153 | 437 | 54.8 | Plus |
Dpse\Obp19a-PA | 145 | GA11172-PA | 7..138 | 14..145 | 138 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17416-PA | 153 | GM17416-PA | 1..153 | 1..153 | 819 | 99.3 | Plus |
Dsec\GM23029-PA | 159 | GM23029-PA | 30..159 | 23..153 | 142 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Obp76a-PA | 153 | GD12267-PA | 1..153 | 1..153 | 821 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Obp76a-PA | 165 | GJ11873-PA | 36..165 | 24..153 | 315 | 41.5 | Plus |
Dvir\Obp19a-PA | 162 | GJ15643-PA | 43..162 | 31..153 | 143 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20246-PA | 151 | GK20246-PA | 12..151 | 14..153 | 414 | 49.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14740-PA | 153 | GE14740-PA | 1..153 | 1..153 | 703 | 90.2 | Plus |
Dyak\GE22483-PA | 153 | GE22483-PA | 1..153 | 1..153 | 703 | 90.2 | Plus |
Dyak\GE17879-PA | 159 | GE17879-PA | 30..159 | 23..153 | 135 | 28.4 | Plus |