Clone IP02808 Report

Search the DGRC for IP02808

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:28
Well:8
Vector:pOT2
Associated Gene/Transcriptfzo-RA
Protein status:IP02808.pep: gold
Preliminary Size:2399
Sequenced Size:2312

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4568 2005-01-01 Successful iPCR screen
fzo 2008-04-29 Release 5.5 accounting
fzo 2008-08-15 Release 5.9 accounting
fzo 2008-12-18 5.12 accounting

Clone Sequence Records

IP02808.complete Sequence

2312 bp (2312 high quality bases) assembled on 2005-02-26

GenBank Submission: BT023232

> IP02808.complete
CAAAACAACATCTACAGTTGCCTATATTTCATAAATAAATTTGTTAACAT
TTTTGTAATATCTAATCATAATGGCGGAATCTGACTCCGGAGAAAGTACG
TCGTCGGTGTCCTCGTTTATATCCTCATCGTCGTCTTCGCGATTAAGTGA
GTTTGTGGACGCAAAGACAGAACTGCAGGATATATATCACGATTTGAGTA
ATTACCTGTCCAATTTCCTAACCATTTTGGAGGAGACTGTCCTGTTAAAA
GATCGACAAATGCTGGAGCACCTGTGCGCCTTCTCCAGCAGGGTGGAGGC
CATTGCAAAGGTTCTTTCACGTGATCGAATGAAGGTGGCATTTTTTGGAC
GCACCTCAAATGGAAAAAGTGCCGTGATCAATGCACTTCTGCATGAAAAA
ATCCTGCCCAGCGCCATGGGCCATACCACCAGCTGTTTTTGTCAAGTGCA
AGCTAATGGCTCGAATGAAACCGAGCACGTAAAGGTCGAGCAGGAGGATG
AGCATATGGAACTGAGTGCCCTAAGCCAACTGGCCAGTGCACATTCTCCT
GGGGCCCTAAAACCCTCAACTCTGCTGCAGGTCAATATGGCCAAGAACCG
TTGCTCGATATTGGATTACGATGTGGTTTTGATGGATACACCTGGAGTGG
ATGTAACAGCGCAACTGGACGATTGCCTAGATAGCTACTGCATGGATGCG
GATGTTTTCATTCTAGTTCTCAACGCCGAGTCCACTGTTTCGCGCGTGGA
AAGGCAGTTCTTCAAGGACGTGGCATCCAAACTCTCGCGTCCAAATCTCT
TTATACTCAACAATCGATGGGATAAGGCCAGCAGTCTGGAGCCGGAAATG
GAGCAGAAGGTAAAGGATCAGCATATGGAACGTTGCGTTAACCTGCTCGT
GGATGAATTAGGTGTTTATTCAACTGCACAGGAAGCGTGGGAAAGGATCT
ATCATGTTTCAGCACTGGAGGCATTGCATATAAGGAATGGTCAGATTACG
AATCCCTCGGGACAAACCCAACAGCGATATCAGGAGTTTCTGCGTTTCGA
AAATGATTTTTCGAATTGCCTCGCGGTGTCAGCGTTAAAAACCAAATTTG
GTCCACACTTGCTAAGTGCGCAGAAGATTTTAAACCAGTTAAAATCAACT
CTGATATGCCCTTTCATAGAGAAAGTAAGTCGTCTTATCGATGAGAATAA
GGAGAGAAGAGCTAACTTGAATGCCGAAATAGAGGACTGGTTAATACTAA
TGCAAGAGGATAGAGAAGCGCTTCAATATTGTTTCGAAGAACTGACTGAA
ATGACACAAAGAGTAGGTCGGTGCGTTTTGAACGACCAGATAAAAACGTT
AATACCCTCGTCTGTGCTATCATTCTCGCAACCATTTCACCCGGAATTCC
CAGCACAAATAGGCCAGTACCAACGCTCGTTATGTGCCCATTTGGATAAA
CTTCTTGAAGATCGTGTCCTTCAATGTCTCTCCATACCCCTACAAAGAAA
AATATTAGATATAGAGAAAGAAATTGGGCTTCCGATCGCCGAGAACTCTT
GCGATTGGCAACTAATCTACGGCCTGGATTGCCAATCCTATATGAGTGAC
TTTCAGCCAGATCTTAGGTTTCGATTTTCTTTGGGTTTTACTGCCCTGTG
GCATCGTCTTGAAGGCAACCTACCGTTGCACGCAAGTCCATTTCGAATTC
AAAAGTTACAAAATGGTCACAAGAAATGTTCGCCCCTGCCACCTTTAGTT
AACGGAAACCATTGGCAGATGCTGGAATCTTTGGTGAAGTCTAAAGGTAG
CTTGGGCACCGTTTTACTGAGCGCCATGGCCATCCGTTCGTTCAACTGGC
CAATTGTATTGATCCTTGGTGGGCTCGTCGGATCCTTTTACATCTACGAG
TACGCCGCTTGGACAACTGCCGCCCAAGAGCGAAGTTTCAAGAGCCAGTA
CGCCAGGCTCTTGCAACAACGTCTGCGGTCGGATGTGCAGCAAACTGTTA
GCGGTTTTGAGCTCCAGTTGCGACAGCACCTGGCAACGGTCCGAAATTGC
TGGGAAGCCCAGTCCAATGAGACACTGAATGACCTGAACGTAAGGACCGC
GGAGCTGACCAAACAAATACAATCGATGGAGGTGTTGCAGCTCAGCCTGA
AGAAGTTTCGGGACAAGGGACAGCTGCTGGCCAGTCGGTTGGGAGACTTT
CAAGAGACCTACTTGACCAAGAGCTGACAATTATGAGGGGGGTTACAACA
AATTCTAAATGTTCTTAATAGTTTTAATTTATTTTTGGTTACCTAAAAAA
AAAAAAAAAAAA

IP02808.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:43:21
Subject Length Description Subject Range Query Range Score Percent Strand
fzo-RA 2399 fzo-RA 4..2299 1..2296 11480 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:29:08
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19025146..19027439 2294..1 11320 99.6 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:36:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:29:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23201736..23204031 2296..1 11480 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:33:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22942567..22944862 2296..1 11480 100 Minus
Blast to na_te.dros performed on 2019-03-15 15:29:07 has no hits.

IP02808.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:30:25 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19025146..19027439 1..2294 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:19:00 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 1..2157 71..2227 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:11:36 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 1..2157 71..2227 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:29:42 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 1..2157 71..2227 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:56:13 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 1..2157 71..2227 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:07:25 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 1..2157 71..2227 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:05:44 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 4..2297 1..2294 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:11:36 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 4..2297 1..2294 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:29:42 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 4..2297 1..2294 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:56:16 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 4..2297 1..2294 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:07:25 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
fzo-RA 4..2297 1..2294 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:25 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23201738..23204031 1..2294 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:25 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23201738..23204031 1..2294 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:30:25 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23201738..23204031 1..2294 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:29:42 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19027460..19029753 1..2294 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:31:29 Download gff for IP02808.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22942569..22944862 1..2294 100   Minus

IP02808.pep Sequence

Translation from 70 to 2226

> IP02808.pep
MAESDSGESTSSVSSFISSSSSSRLSEFVDAKTELQDIYHDLSNYLSNFL
TILEETVLLKDRQMLEHLCAFSSRVEAIAKVLSRDRMKVAFFGRTSNGKS
AVINALLHEKILPSAMGHTTSCFCQVQANGSNETEHVKVEQEDEHMELSA
LSQLASAHSPGALKPSTLLQVNMAKNRCSILDYDVVLMDTPGVDVTAQLD
DCLDSYCMDADVFILVLNAESTVSRVERQFFKDVASKLSRPNLFILNNRW
DKASSLEPEMEQKVKDQHMERCVNLLVDELGVYSTAQEAWERIYHVSALE
ALHIRNGQITNPSGQTQQRYQEFLRFENDFSNCLAVSALKTKFGPHLLSA
QKILNQLKSTLICPFIEKVSRLIDENKERRANLNAEIEDWLILMQEDREA
LQYCFEELTEMTQRVGRCVLNDQIKTLIPSSVLSFSQPFHPEFPAQIGQY
QRSLCAHLDKLLEDRVLQCLSIPLQRKILDIEKEIGLPIAENSCDWQLIY
GLDCQSYMSDFQPDLRFRFSLGFTALWHRLEGNLPLHASPFRIQKLQNGH
KKCSPLPPLVNGNHWQMLESLVKSKGSLGTVLLSAMAIRSFNWPIVLILG
GLVGSFYIYEYAAWTTAAQERSFKSQYARLLQQRLRSDVQQTVSGFELQL
RQHLATVRNCWEAQSNETLNDLNVRTAELTKQIQSMEVLQLSLKKFRDKG
QLLASRLGDFQETYLTKS*

IP02808.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19353-PA 807 GF19353-PA 67..805 23..716 1045 34.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:53:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19591-PA 808 GG19591-PA 60..806 14..716 1064 35.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24062-PA 805 GH24062-PA 62..802 19..715 1056 35.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
fzo-PA 718 CG4568-PA 1..718 1..718 3680 100 Plus
Marf-PC 810 CG3869-PC 62..808 14..716 1024 34.7 Plus
Marf-PB 810 CG3869-PB 62..808 14..716 1024 34.7 Plus
Marf-PD 814 CG3869-PD 62..812 14..716 1014 34.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\Marf-PA 806 GI15189-PA 44..803 9..715 1064 35.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:53:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23042-PA 483 GL23042-PA 26..367 23..362 999 56 Plus
Dper\GL26855-PA 790 GL26855-PA 78..734 20..627 964 35.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18264-PB 727 GA18264-PB 26..719 23..718 1580 46.2 Plus
Dpse\GA17739-PA 825 GA17739-PA 64..823 5..716 1023 34.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:53:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12488-PA 724 GM12488-PA 62..722 14..716 922 34.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:53:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16797-PA 350 GD16797-PA 25..349 21..338 727 47.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:53:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17071-PA 804 GJ17071-PA 64..801 23..715 1061 36.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16527-PA 813 GK16527-PA 74..810 23..715 1049 35.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16751-PA 810 GE16751-PA 62..808 14..716 1046 35 Plus

IP02808.hyp Sequence

Translation from 70 to 2226

> IP02808.hyp
MAESDSGESTSSVSSFISSSSSSRLSEFVDAKTELQDIYHDLSNYLSNFL
TILEETVLLKDRQMLEHLCAFSSRVEAIAKVLSRDRMKVAFFGRTSNGKS
AVINALLHEKILPSAMGHTTSCFCQVQANGSNETEHVKVEQEDEHMELSA
LSQLASAHSPGALKPSTLLQVNMAKNRCSILDYDVVLMDTPGVDVTAQLD
DCLDSYCMDADVFILVLNAESTVSRVERQFFKDVASKLSRPNLFILNNRW
DKASSLEPEMEQKVKDQHMERCVNLLVDELGVYSTAQEAWERIYHVSALE
ALHIRNGQITNPSGQTQQRYQEFLRFENDFSNCLAVSALKTKFGPHLLSA
QKILNQLKSTLICPFIEKVSRLIDENKERRANLNAEIEDWLILMQEDREA
LQYCFEELTEMTQRVGRCVLNDQIKTLIPSSVLSFSQPFHPEFPAQIGQY
QRSLCAHLDKLLEDRVLQCLSIPLQRKILDIEKEIGLPIAENSCDWQLIY
GLDCQSYMSDFQPDLRFRFSLGFTALWHRLEGNLPLHASPFRIQKLQNGH
KKCSPLPPLVNGNHWQMLESLVKSKGSLGTVLLSAMAIRSFNWPIVLILG
GLVGSFYIYEYAAWTTAAQERSFKSQYARLLQQRLRSDVQQTVSGFELQL
RQHLATVRNCWEAQSNETLNDLNVRTAELTKQIQSMEVLQLSLKKFRDKG
QLLASRLGDFQETYLTKS*

IP02808.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:54:14
Subject Length Description Subject Range Query Range Score Percent Strand
fzo-PA 718 CG4568-PA 1..718 1..718 3680 100 Plus
Marf-PC 810 CG3869-PC 62..808 14..716 1024 34.7 Plus
Marf-PB 810 CG3869-PB 62..808 14..716 1024 34.7 Plus
Marf-PD 814 CG3869-PD 62..812 14..716 1014 34.6 Plus