Clone IP03221 Report

Search the DGRC for IP03221

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:32
Well:21
Vector:pOT2
Associated Gene/TranscriptAmnionless-RA
Protein status:IP03221.pep: gold
Preliminary Size:1668
Sequenced Size:1699

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11592 2005-01-01 Successful iPCR screen
CG11592 2008-04-29 Release 5.5 accounting
CG11592 2008-08-15 Release 5.9 accounting
CG11592 2008-12-18 5.12 accounting

Clone Sequence Records

IP03221.complete Sequence

1699 bp (1699 high quality bases) assembled on 2005-03-01

GenBank Submission: BT023193

> IP03221.complete
CTGAGTTTCCACGATGGGTTTGCATTGGCAATGGCTGATCTGGGCATTGG
TGGGGCTCCATGTGGCACTGGCCACCAAGTGGTATGGCGGTGGAATGGAC
TTCAATGATCCCACCGCCTGGCTAGATGACCACTTGCCTTGTGCACAGGA
TTTGGTCGTTTTTCCAGAGTACTACCCAGCTCTGCTGCCCTTGCCCGAGG
ACATATCCATTGATGGCTTGGTTTTCCCCAGAGAAGGGGCGATCCTTTTG
GCAGAGGAATCCACCATTACCTTTGGATCTGATAAGCAGCCCTCCTGTGA
GAGCGATGAGAATAAGGCCTATTTGAAGCCACCGAAGTCGAGTAAATGGT
TCGATCCTGGCACCTGGACGGACAAATCTAAGGAATTTTCCACATTCACA
CCAGAGCTGGAGAGGATTCCCTGTGATGACGAGCAGGTCATAATCAAGGG
GCACGGACCATTGGCCTTTGACCTAGAAAACGTGCAGTATCTGAGGCTGG
GACAGCTTATTCTGGCTGGTTCTTCCATTTCCAAAACGTACTTGGAGCAA
CTTATCAGCAGAGATCTGGGCCAGTTTCTCTTTTACAATGCCGAGTACGT
CCAGGTGGAGTACTACAGAGGAGAGCTGTGTGGCTGCCACAAGGACTTCG
AGCGACTGCTGGAACCCGTTTGCCATAATGTCCAGGAGCAGTGCGAGACG
CCCCACTGCTTGTCTCCAGTTCGACCCTTGGGATCGTGCTGCCTAATCTG
CGGGGCCATTCTATCCACGCCCACGACCCACTGCACCGAGGGCAGTAGAA
AGGAGTTGGTGGCCCAGATAAGTAACCTCATCAGCCAGGAGAGCCTGAAG
GATCAGATCGGCCTACACGTGGAGTTTGTGGGCTCCCAGAAGTTTGGAAA
CTGCCTGCAGGCGGTGGTAACTGATCGCCATAAATATAGTGAACGGAGCT
TGGAGTTTCTACAGCAAAACGAACACAATTGGAACAAGACAGGAACAACG
TTAAAAGTTTCTGGTCGACCCTATAATCCGAATGTTAGCTTCTCCTCGAT
TGTTCTCATCCTTTTCTGCATGGCACTGGTGGGTCTGGTTTCTGTGGTCA
TTTTGGCGCACTTTATGCCTGAGAACCCCTACCTAAACCGCATACCACAG
TGGATCCACGACCCCCGTCTTTGGAGGTGGCGTCACTTGGGATTGAGACT
GCGCCGGAATCTGCTGTTTAACCGCTTCGACAATGGTGGCGCAGAGGGTG
GATCCAGTGAAGGAGGAGCTTCTGGTGTGGATCGTCTGGGAATTATGGCT
TACGATCCGGAAAGTGGCGAGGTGAGGGAGCGAGCCTTTGACAATCCGAT
GTTTGAGCAGGGAGGAGCTTTGGAGGAGGCTGCCAAGGAGTCGCAGGAGC
AGGATGAAATCCTGAGTGTCCCCAAAATGGAGACTGGTGATCTGGACGCC
AGAAGTGTGGTGGATGAACAGGAGCTTACGGAAATCAATTTGGAAACCTG
CGAGGCGGACACCGACGAGGAGACCATCTAATTAAGATTCTCAAAAATAA
GACATAGAAACCTGATTCGAAAGCACCAATGGAGCATCACGTATAATCTG
ATGTACAATTTTAAGATTGTGTGTTCTATATATGTATATTAATAGATCTG
CTTATTAAAGTATTTGTTATGATTACATTATAAAAAAAAAAAAAAAAAA

IP03221.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:54:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG11592-RA 1668 CG11592-RA 1..1668 14..1681 8340 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:42:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 287288..288968 1681..1 8405 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:37:06 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:42:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 287249..288932 1684..1 8420 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:43:04
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 287249..288932 1684..1 8420 100 Minus
Blast to na_te.dros performed on 2019-03-16 03:42:28 has no hits.

IP03221.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:43:17 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 287288..288968 1..1681 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:19:49 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11592-RA 1..1518 14..1531 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:26:38 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11592-RA 1..1518 14..1531 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:02:20 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11592-RA 1..1518 14..1531 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:10:42 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11592-RA 1..1518 14..1531 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:12:34 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
Amnionless-RA 1..1518 14..1531 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:29:33 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11592-RA 1..1668 14..1681 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:26:38 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11592-RA 1..1668 14..1681 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:02:20 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11592-RA 1..1681 1..1681 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:10:42 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
CG11592-RA 1..1668 14..1681 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:12:34 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
Amnionless-RA 1..1681 1..1681 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:43:17 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
2L 287252..288932 1..1681 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:43:17 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
2L 287252..288932 1..1681 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:43:17 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
2L 287252..288932 1..1681 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:02:20 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 287252..288932 1..1681 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:47:12 Download gff for IP03221.complete
Subject Subject Range Query Range Percent Splice Strand
2L 287252..288932 1..1681 100   Minus

IP03221.pep Sequence

Translation from 13 to 1530

> IP03221.pep
MGLHWQWLIWALVGLHVALATKWYGGGMDFNDPTAWLDDHLPCAQDLVVF
PEYYPALLPLPEDISIDGLVFPREGAILLAEESTITFGSDKQPSCESDEN
KAYLKPPKSSKWFDPGTWTDKSKEFSTFTPELERIPCDDEQVIIKGHGPL
AFDLENVQYLRLGQLILAGSSISKTYLEQLISRDLGQFLFYNAEYVQVEY
YRGELCGCHKDFERLLEPVCHNVQEQCETPHCLSPVRPLGSCCLICGAIL
STPTTHCTEGSRKELVAQISNLISQESLKDQIGLHVEFVGSQKFGNCLQA
VVTDRHKYSERSLEFLQQNEHNWNKTGTTLKVSGRPYNPNVSFSSIVLIL
FCMALVGLVSVVILAHFMPENPYLNRIPQWIHDPRLWRWRHLGLRLRRNL
LFNRFDNGGAEGGSSEGGASGVDRLGIMAYDPESGEVRERAFDNPMFEQG
GALEEAAKESQEQDEILSVPKMETGDLDARSVVDEQELTEINLETCEADT
DEETI*

IP03221.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:19:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24904-PA 560 GF24904-PA 64..559 10..505 1839 70.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:19:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24661-PA 505 GG24661-PA 1..505 1..505 2286 90.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:19:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10219-PA 538 GH10219-PA 28..524 22..494 1390 57.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:44
Subject Length Description Subject Range Query Range Score Percent Strand
Amnionless-PB 505 CG11592-PB 1..505 1..505 2710 100 Plus
Amnionless-PA 505 CG11592-PA 1..505 1..505 2710 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:19:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15029-PA 521 GI15029-PA 8..517 8..504 1405 54.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:19:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25825-PA 598 GL25825-PA 73..596 2..504 1861 66.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:19:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11086-PA 598 GA11086-PA 72..596 1..504 1858 66.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:19:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16681-PA 502 GM16681-PA 1..502 1..505 2400 94.5 Plus
Dsec\GM13270-PA 509 GM13270-PA 67..509 46..505 2100 92.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22969-PA 502 GD22969-PA 1..502 1..505 2402 94.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17241-PA 620 GJ17241-PA 107..605 8..493 1237 52.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:19:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14824-PA 527 GK14824-PA 16..513 15..494 1466 55.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:19:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16249-PA 505 GE16249-PA 1..505 1..505 2343 91.1 Plus

IP03221.hyp Sequence

Translation from 13 to 1530

> IP03221.hyp
MGLHWQWLIWALVGLHVALATKWYGGGMDFNDPTAWLDDHLPCAQDLVVF
PEYYPALLPLPEDISIDGLVFPREGAILLAEESTITFGSDKQPSCESDEN
KAYLKPPKSSKWFDPGTWTDKSKEFSTFTPELERIPCDDEQVIIKGHGPL
AFDLENVQYLRLGQLILAGSSISKTYLEQLISRDLGQFLFYNAEYVQVEY
YRGELCGCHKDFERLLEPVCHNVQEQCETPHCLSPVRPLGSCCLICGAIL
STPTTHCTEGSRKELVAQISNLISQESLKDQIGLHVEFVGSQKFGNCLQA
VVTDRHKYSERSLEFLQQNEHNWNKTGTTLKVSGRPYNPNVSFSSIVLIL
FCMALVGLVSVVILAHFMPENPYLNRIPQWIHDPRLWRWRHLGLRLRRNL
LFNRFDNGGAEGGSSEGGASGVDRLGIMAYDPESGEVRERAFDNPMFEQG
GALEEAAKESQEQDEILSVPKMETGDLDARSVVDEQELTEINLETCEADT
DEETI*

IP03221.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 11:58:27
Subject Length Description Subject Range Query Range Score Percent Strand
Amnionless-PB 505 CG11592-PB 1..505 1..505 2710 100 Plus
Amnionless-PA 505 CG11592-PA 1..505 1..505 2710 100 Plus