IP03283.complete Sequence
901 bp (901 high quality bases) assembled on 2004-12-17
GenBank Submission: BT023699
> IP03283.complete
CAACAAGGCAATCTCACACACAAAACATAAATACCTAAACACAATGCATA
AGAACTTCAAAAGTCTGCAAAACACTAACCCATCCAATATGAAGAAGGCC
AAAACCGCGGCTAAGGGATTTCCCATTCACCTTGGTTTTTATAGGAACCC
CAGCGAGTATGACGATCGCACGACCACCAATCGCGATTATGGATTGAAAA
GTTCCAAGGGTTCTGGAACGCCATTTCCGCAAAAACAAAAGAAATTAGAT
ACGGCGGCACTAACGGCCAAGTTGGAGACGGATAGTCTGCTCCGATCTGA
ATTAAGCGACTTATCGATTGTCATCTCCGAAAGAAAGGCGTCCTCAGAAC
CACAAGTGGCATCCAATACTACAACCGAACCAACGTTTGAGATGAGACGA
AAGCTTTTTGACGAGGCCGAGTTCACCATCTGCAAGGGTCACAAACTGAA
CCAGGACTTCCATCATATAGTCGAAGATGAAAAGCATTTTAACAAAAGGC
AGAGTGCCAAGGATAACATTCCCTATAGCAATTTCATGGATCTGAAGAAC
TTCTGCGACCAGAACAACATAAAATTTTCCAAGGGTTTTGACGGTTAGCG
TTCCACTGTTGTCATCGAATTAGGAGCGGGAATAAAGTGCAGGAGTCGGG
AATTCCATCTTCGCATCTCCAACATCACCATTTCCACCATCTGTCCCTCT
TGAAAGTGTCACTCACGGAGGATAAATGGTGCCAAGTGCAGCAGAAAAAC
CAGGATGCTAGGTTTGTGAGGAGGCCCGACTGGGAGATACCTGCTATACA
CTTTTCCAACTGCAAAGAATTACATGGTACTCAATTCAATAATTCAATAA
TAAAGGGTTCCTATCTTATACATGTGCAATAAACGAAAAAAAAAAAAAAA
A
IP03283.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:50:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
I-t-RA | 1317 | I-t-RA | 407..1296 | 1..888 | 4395 | 99.7 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:56:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 7529571..7530455 | 3..885 | 4345 | 99.7 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:37:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:56:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11704030..11704919 | 1..888 | 4385 | 99.8 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:39:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 11444861..11445750 | 1..888 | 4395 | 99.7 | Plus |
Blast to na_te.dros performed on 2019-03-16 17:56:07 has no hits.
IP03283.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:57:05 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 7529567..7530455 | 1..885 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:20:01 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 1..555 | 44..598 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:21:38 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 1..555 | 44..598 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:04:01 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 1..555 | 44..598 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:05:37 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 1..555 | 44..598 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:23:23 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 1..555 | 44..598 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:22:35 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 407..1293 | 1..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:21:38 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 407..1293 | 1..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:04:01 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 1..887 | 1..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:05:37 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 407..1293 | 1..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:23:23 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
I-t-RA | 1..887 | 1..885 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:57:05 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11704030..11704916 | 1..885 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:57:05 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11704030..11704916 | 1..885 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:57:05 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11704030..11704916 | 1..885 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:04:01 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7529752..7530638 | 1..885 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:41:58 Download gff for
IP03283.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11444861..11445747 | 1..885 | 99 | | Plus |
IP03283.hyp Sequence
Translation from 0 to 597
> IP03283.hyp
NKAISHTKHKYLNTMHKNFKSLQNTNPSNMKKAKTAAKGFPIHLGFYRNP
SEYDDRTTTNRDYGLKSSKGSGTPFPQKQKKLDTAALTAKLETDSLLRSE
LSDLSIVISERKASSEPQVASNTTTEPTFEMRRKLFDEAEFTICKGHKLN
QDFHHIVEDEKHFNKRQSAKDNIPYSNFMDLKNFCDQNNIKFSKGFDG*
IP03283.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:00:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
I-t-PA | 184 | CG14719-PA | 1..184 | 15..198 | 968 | 100 | Plus |
CG5509-PA | 139 | CG5509-PA | 23..139 | 61..194 | 167 | 32.8 | Plus |
IP03283.pep Sequence
Translation from 43 to 597
> IP03283.pep
MHKNFKSLQNTNPSNMKKAKTAAKGFPIHLGFYRNPSEYDDRTTTNRDYG
LKSSKGSGTPFPQKQKKLDTAALTAKLETDSLLRSELSDLSIVISERKAS
SEPQVASNTTTEPTFEMRRKLFDEAEFTICKGHKLNQDFHHIVEDEKHFN
KRQSAKDNIPYSNFMDLKNFCDQNNIKFSKGFDG*
IP03283.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:49:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF18394-PA | 168 | GF18394-PA | 2..167 | 18..179 | 183 | 31.8 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:49:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18388-PA | 172 | GG18388-PA | 1..171 | 8..178 | 516 | 58.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
I-t-PA | 184 | CG14719-PA | 1..184 | 1..184 | 968 | 100 | Plus |
CG5509-PA | 139 | CG5509-PA | 23..139 | 47..180 | 167 | 32.8 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:49:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA30219-PA | 184 | GA30219-PA | 39..181 | 47..184 | 141 | 33.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:49:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM23973-PA | 185 | GM23973-PA | 1..185 | 1..184 | 790 | 82.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:49:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD18778-PA | 185 | GD18778-PA | 1..185 | 1..184 | 802 | 82.2 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:49:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK11099-PA | 208 | GK11099-PA | 2..201 | 7..183 | 197 | 32.7 | Plus |
Dwil\GK11992-PA | 229 | GK11992-PA | 36..228 | 17..183 | 174 | 29.4 | Plus |
Dwil\GK24891-PA | 168 | GK24891-PA | 6..152 | 57..181 | 147 | 35.1 | Plus |
Dwil\GK18127-PA | 175 | GK18127-PA | 19..170 | 47..182 | 137 | 28.6 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:49:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE24197-PA | 167 | GE24197-PA | 1..166 | 8..178 | 488 | 57 | Plus |