BDGP Sequence Production Resources |
Search the DGRC for IP03356
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 33 |
Well: | 56 |
Vector: | pOT2 |
Associated Gene/Transcript | Gr28b-RB |
Protein status: | IP03356.pep: gold |
Preliminary Size: | 3684 |
Sequenced Size: | 1678 |
Gene | Date | Evidence |
---|---|---|
Gr28b | 2008-04-29 | Release 5.5 accounting |
Gr28b | 2008-08-15 | Release 5.9 accounting |
Gr28b | 2008-12-18 | 5.12 accounting |
1678 bp (1678 high quality bases) assembled on 2006-09-22
GenBank Submission: BT029037
> IP03356.complete AACGGTTGTGCGATTCGCCGTGCTCTGTTTTCATTTCCGCTTCCGGTGTG CATTAGTTCGATTTCGCCACTATGTCCGCCCTGCGTCGGGTGCGCAAATA CTTTATATCCTCTCAGGTCTACGAGGCACTGCGTCCACTATTCTTCCTAA CGTTTCTATACGGACTAACGCCATTTCATGTGGTCAGACGAAAGATGGGG GAATCCTACTTGAAGATGTCCTGTTTCGGTGTCTTCAACATCTTCATTTA CATCTGCCTCTGCGGATTCTGCTACATTTCATCCCTGAGGCAGGGAGAAT CCATTGTGGGATATTTCTTTCGCACCGAAATCTCCACAATCGGCGATCGT TTGCAGATCTTTAATGGTTTGATAGCTGGTGCTGTGATTTATACGTCGGC AATCCTAAAACGCTGCAAGCTTTTGGGCACACTGACCATTCTACACAGCT TGGATACGAACTTCTCGAACATTGGAGTACGTGTGAAATATTCGAGAATA TTCCGGTACTCGCTACTGGTGCTGATCTTCAAGCTACTGATCCTGGGTGT TTATTTCGTTGGAGTTTTCCGGCTGCTCGTCTCCCTGGATGTCACACCAT CGTTCTGCGTTTGTATGACATTCTTTCTGCAACATTCGGTTGTCTCCATA GCGATTTGTTTGTTCTGCGTGATTGCCTTCAGTTTCGAGCGGCGCCTCAG TATCATCAATCAGGTGTTGAAGAACCTAGCCCATCAATGGGACACCCGAA GCCTCAAGGCAGTGAATCAAAAACAGCGCTCTCTACAATGTCTCGATTCA TTTTCCATGTACACCATTGTAACCAAGGATCCTGCGGAGATTATACAGGA GTCCATGGAGATACATCATCTCATTTGCGAGGCAGCTGCCACGGCTAACA AATATTTTACCTACCAATTGCTGACCATTATATCCATAGCATTTCTGATC ATCGTTTTCGATGCATACTATGTTCTGGAGACGCTACTGGGAAAATCGAA GCGCGAAAGCAAATTCAAAACTGTGGAATTTGTGACATTTTTCTCGTGTC AAATGATTTTGTATCTGATCGCCATAATTTCCATTGTCGAGGGAAGTAAT CGAGCCATCAAAAAGAGCGAGAAAACTGGAGGCATAGTGCACTCCCTACT CAATAAAACCAAAAGTGCTGAGGTCAAGGAGAAACTGCAGCAATTCTCCA TGCAGTTGATGCATCTGAAAATTAATTTTACTGCAGCTGGTCTGTTCAAC ATCGACCGCACATTGTATTTCACGATCAGCGGGGCCTTGACCACTTATCT CATCATCTTGCTGCAGTTCACATCCAATTCCCCGAACAATGGTTATGGGA ATGGCAGCTCTTGCTGTGAGACCTTCAATAATATGACGAATCATACGCTT TAGATGTGCTATCGATGTCATTACAATATGGGGGATGGAAATCGAAGGAA GTCGATGGAGTCGGTGAAATGGTATTGAATACGTCCAGCAGAATGTGTAT TTTTTGTAAATGTTATTGTTGTTGCTAAAAAAAAGTGTTTTCTGTCAATA TAAACCAACGATTGGAAATAAATTTTTAATCGTTTAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 7458987..7459702 | 716..1 | 3520 | 99.4 | Minus |
chr2L | 23010047 | chr2L | 7454261..7454824 | 1274..711 | 2820 | 100 | Minus |
chr2L | 23010047 | chr2L | 7453886..7454197 | 1585..1274 | 1560 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 7459927..7460642 | 716..1 | 3580 | 100 | Minus |
2L | 23513712 | 2L | 7455201..7455764 | 1274..711 | 2820 | 100 | Minus |
2L | 23513712 | 2L | 7454825..7455137 | 1586..1274 | 1565 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 7459927..7460642 | 716..1 | 3580 | 100 | Minus |
2L | 23513712 | 2L | 7455201..7455764 | 1274..711 | 2820 | 100 | Minus |
2L | 23513712 | 2L | 7454825..7455137 | 1586..1274 | 1565 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 7453886..7454196 | 1275..1585 | 100 | <- | Minus |
chr2L | 7454261..7454821 | 714..1274 | 100 | <- | Minus |
chr2L | 7458990..7459702 | 1..713 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1332 | 72..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1332 | 72..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1332 | 72..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1332 | 72..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1332 | 72..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1585 | 1..1585 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1585 | 1..1585 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1585 | 1..1585 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1585 | 1..1585 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gr28b-RB | 1..1585 | 1..1585 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7454826..7455136 | 1275..1585 | 100 | <- | Minus |
2L | 7455201..7455761 | 714..1274 | 100 | <- | Minus |
2L | 7459930..7460642 | 1..713 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7454826..7455136 | 1275..1585 | 100 | <- | Minus |
2L | 7455201..7455761 | 714..1274 | 100 | <- | Minus |
2L | 7459930..7460642 | 1..713 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7454826..7455136 | 1275..1585 | 100 | <- | Minus |
2L | 7455201..7455761 | 714..1274 | 100 | <- | Minus |
2L | 7459930..7460642 | 1..713 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 7454826..7455136 | 1275..1585 | 100 | <- | Minus |
arm_2L | 7455201..7455761 | 714..1274 | 100 | <- | Minus |
arm_2L | 7459930..7460642 | 1..713 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 7454826..7455136 | 1275..1585 | 100 | <- | Minus |
2L | 7455201..7455761 | 714..1274 | 100 | <- | Minus |
2L | 7459930..7460642 | 1..713 | 100 | Minus |
Translation from 71 to 1402
> IP03356.hyp MSALRRVRKYFISSQVYEALRPLFFLTFLYGLTPFHVVRRKMGESYLKMS CFGVFNIFIYICLCGFCYISSLRQGESIVGYFFRTEISTIGDRLQIFNGL IAGAVIYTSAILKRCKLLGTLTILHSLDTNFSNIGVRVKYSRIFRYSLLV LIFKLLILGVYFVGVFRLLVSLDVTPSFCVCMTFFLQHSVVSIAICLFCV IAFSFERRLSIINQVLKNLAHQWDTRSLKAVNQKQRSLQCLDSFSMYTIV TKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYY VLETLLGKSKRESKFKTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSE KTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYF TISGALTTYLIILLQFTSNSPNNGYGNGSSCCETFNNMTNHTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gr28b-PB | 443 | CG13788-PB | 1..443 | 1..443 | 2250 | 100 | Plus |
Gr28b-PC | 470 | CG13788-PC | 30..470 | 5..443 | 1532 | 68.9 | Plus |
Gr28b-PD | 440 | CG13788-PD | 9..440 | 11..443 | 1397 | 66.3 | Plus |
Gr28b-PA | 452 | CG13788-PA | 15..452 | 6..443 | 1395 | 64.4 | Plus |
Gr28b-PE | 447 | CG13788-PE | 18..447 | 16..443 | 1303 | 64.5 | Plus |
Translation from 71 to 1402
> IP03356.pep MSALRRVRKYFISSQVYEALRPLFFLTFLYGLTPFHVVRRKMGESYLKMS CFGVFNIFIYICLCGFCYISSLRQGESIVGYFFRTEISTIGDRLQIFNGL IAGAVIYTSAILKRCKLLGTLTILHSLDTNFSNIGVRVKYSRIFRYSLLV LIFKLLILGVYFVGVFRLLVSLDVTPSFCVCMTFFLQHSVVSIAICLFCV IAFSFERRLSIINQVLKNLAHQWDTRSLKAVNQKQRSLQCLDSFSMYTIV TKDPAEIIQESMEIHHLICEAAATANKYFTYQLLTIISIAFLIIVFDAYY VLETLLGKSKRESKFKTVEFVTFFSCQMILYLIAIISIVEGSNRAIKKSE KTGGIVHSLLNKTKSAEVKEKLQQFSMQLMHLKINFTAAGLFNIDRTLYF TISGALTTYLIILLQFTSNSPNNGYGNGSSCCETFNNMTNHTL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14022-PA | 666 | GF14022-PA | 224..666 | 1..443 | 2267 | 96.8 | Plus |
Dana\GF14023-PA | 451 | GF14023-PA | 12..428 | 13..418 | 579 | 36.6 | Plus |
Dana\GF14022-PA | 666 | GF14022-PA | 6..224 | 1..215 | 181 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23530-PA | 443 | GG23530-PA | 1..443 | 1..443 | 2304 | 99.3 | Plus |
Dere\GG23531-PA | 450 | GG23531-PA | 2..426 | 3..416 | 567 | 35.6 | Plus |
Dere\GG15094-PA | 527 | GG15094-PA | 302..497 | 254..440 | 151 | 24.1 | Plus |
Dere\GG12856-PA | 410 | GG12856-PA | 327..400 | 343..416 | 150 | 40.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10568-PA | 452 | GH10568-PA | 14..452 | 5..443 | 1341 | 61.2 | Plus |
Dgri\GH13142-PA | 462 | GH13142-PA | 28..462 | 10..443 | 1327 | 60.6 | Plus |
Dgri\GH13143-PA | 447 | GH13143-PA | 2..428 | 3..418 | 587 | 35 | Plus |
Dgri\GH24883-PA | 416 | GH24883-PA | 361..416 | 374..428 | 162 | 58.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gr28b-PB | 443 | CG13788-PB | 1..443 | 1..443 | 2250 | 100 | Plus |
Gr28b-PC | 470 | CG13788-PC | 30..470 | 5..443 | 1532 | 68.9 | Plus |
Gr28b-PD | 440 | CG13788-PD | 9..440 | 11..443 | 1397 | 66.3 | Plus |
Gr28b-PA | 452 | CG13788-PA | 15..452 | 6..443 | 1395 | 64.4 | Plus |
Gr28b-PE | 447 | CG13788-PE | 18..447 | 16..443 | 1303 | 64.5 | Plus |
Gr28a-PA | 450 | CG13787-PA | 2..442 | 3..423 | 653 | 35.5 | Plus |
Gr66a-PB | 527 | CG7189-PB | 319..497 | 256..440 | 164 | 24.6 | Plus |
Gr2a-PB | 410 | CG18531-PB | 247..409 | 264..424 | 159 | 28.6 | Plus |
Gr2a-PC | 428 | CG18531-PC | 369..427 | 371..424 | 156 | 54.2 | Plus |
Gr43a-PA | 427 | CG1712-PA | 265..422 | 252..416 | 155 | 25.5 | Plus |
Gr43a-PB | 449 | CG1712-PB | 287..444 | 252..416 | 155 | 25.5 | Plus |
Gr43a-PC | 453 | CG1712-PC | 291..448 | 252..416 | 155 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17781-PA | 665 | GI17781-PA | 225..665 | 2..443 | 2136 | 91.9 | Plus |
Dmoj\GI17782-PA | 444 | GI17782-PA | 3..440 | 1..430 | 592 | 34.5 | Plus |
Dmoj\GI17781-PA | 665 | GI17781-PA | 15..224 | 3..214 | 225 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25929-PA | 665 | GL25929-PA | 224..664 | 2..442 | 2225 | 96.1 | Plus |
Dper\GL25930-PA | 448 | GL25930-PA | 12..441 | 13..430 | 621 | 35 | Plus |
Dper\GL14254-PA | 400 | GL14254-PA | 344..398 | 374..430 | 153 | 56.1 | Plus |
Dper\GL25929-PA | 665 | GL25929-PA | 14..222 | 5..213 | 152 | 24.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\Gr28b-PA | 665 | GA12528-PA | 224..664 | 2..442 | 2225 | 96.1 | Plus |
Dpse\Gr28a-PA | 448 | GA12527-PA | 12..441 | 13..430 | 621 | 35 | Plus |
Dpse\Gr2a-PA | 336 | GA14976-PA | 249..334 | 343..430 | 152 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13551-PA | 443 | GM13551-PA | 1..443 | 1..443 | 2299 | 98.9 | Plus |
Dsec\GM13555-PA | 367 | GM13555-PA | 2..359 | 3..423 | 448 | 32.8 | Plus |
Dsec\GM19140-PA | 410 | GM19140-PA | 323..409 | 343..428 | 158 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22492-PA | 666 | GD22492-PA | 224..666 | 1..443 | 2312 | 99.5 | Plus |
Dsim\GD22493-PA | 450 | GD22493-PA | 2..442 | 3..423 | 585 | 35.3 | Plus |
Dsim\GD22492-PA | 666 | GD22492-PA | 15..224 | 6..215 | 197 | 25.2 | Plus |
Dsim\GD16560-PA | 310 | GD16560-PA | 254..309 | 374..428 | 155 | 58.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17606-PA | 665 | GJ17606-PA | 225..665 | 2..443 | 2117 | 93.2 | Plus |
Dvir\GJ17607-PA | 444 | GJ17607-PA | 2..428 | 3..418 | 582 | 34.4 | Plus |
Dvir\GJ17606-PA | 665 | GJ17606-PA | 15..219 | 3..209 | 199 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24721-PA | 636 | GK24721-PA | 235..636 | 41..443 | 1252 | 63.4 | Plus |
Dwil\GK24722-PA | 449 | GK24722-PA | 12..442 | 13..424 | 588 | 34.3 | Plus |
Dwil\GK24721-PA | 636 | GK24721-PA | 28..229 | 11..210 | 177 | 24.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18356-PA | 666 | GE18356-PA | 224..666 | 1..443 | 2313 | 99.3 | Plus |
Dyak\GE18357-PA | 450 | GE18357-PA | 2..445 | 3..426 | 574 | 34.6 | Plus |
Dyak\GE18356-PA | 666 | GE18356-PA | 15..224 | 6..215 | 204 | 24.8 | Plus |
Dyak\GE14583-PA | 173 | GE14583-PA | 19..172 | 273..428 | 159 | 30.8 | Plus |
Dyak\GE21317-PA | 527 | GE21317-PA | 326..497 | 263..440 | 151 | 25 | Plus |