BDGP Sequence Production Resources |
Search the DGRC for IP03529
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 35 |
Well: | 29 |
Vector: | pOT2 |
Associated Gene/Transcript | Best3-RA |
Protein status: | IP03529.pep: gold |
Preliminary Size: | 1608 |
Sequenced Size: | 1728 |
Gene | Date | Evidence |
---|---|---|
CG12327 | 2005-01-01 | Successful iPCR screen |
Best3 | 2008-04-29 | Release 5.5 accounting |
Best3 | 2008-08-15 | Release 5.9 accounting |
Best3 | 2008-12-18 | 5.12 accounting |
1728 bp (1728 high quality bases) assembled on 2005-04-11
GenBank Submission: BT023144
> IP03529.complete AGCCGTTCGGTATTATTAAAGTTTTCCAATTGACAATTCTCGAGTATGAC TGTCTCTTACACCGCTGAGGTGGCAACATGCAGCCATTTCGGCTGCTTCT GGAAGCTTTTGATGAGATGGCGCGCAAGTATCTACAAGATAATATGGGTG GATCTTCTGGCATTCCTGTCCTGCTTCTACTTCATGGCTGTAATATATCG CTATGCTCTCAGGGACGTCGATAAGCCTGTTTTCGAGGACATTGTGATGT ACTGTCATAGCTATAGCAACCTGATTCCGCTCTCTTTCGTACTGGGATTT TATGTGGGCATTATCATAGAACGCTGGTGGAATCAATATATCACAGTTCC TTGGCCCGATCCGCTGGCGGTTTATGTGAGTGCCTTGGTCCGTGGCCAAG ATGAACATGGTCGTCTGATGAGACGCACGATTATGAGATATGTGTGCTTG GCATTGACTATGGTGCTCTCGATGATATCGCCAGTTATAAAGCGTCGCTT TCCAACCTACGATCAGTTAATTGAGGTGGGTTTGCTAAACGCCAACGAGG CAAATATTATGAAGGCAATGGATGTGAAGTTTCCAAAGCACCCAAAGTAT TGGATGCCCATTGTCTGGGCCGCCAGTATTGTAACAAGGGCTCGAAAGGA AGGTCGAATTTGGGATGACTTCTCCCTGAAGTCCATGATAGATGAGCTCA ATAAATTCCGAGCTGGATGCAATATGCTCATCCATTACGATACAATCTCA GTGCCACTGGTCTATACACAGGTCGTCACCCTGGCCGTCTACTCGTACTT TGTGGCCTCGATATTTGGTCACCAGTGGATCGATCGGGATATTAAGCACT ACAATAATATTGTTAGTTACTACTTTCCGTTGTTCAGCACTCTGGAGTTT TTCTTCTTCATGGGCTGGCTTAAGGTGGCCGAGACATTGATTTGTCCTTT TGGCGATGACGACGATGACTTTGAACTGAACTGGCTGATCGATCGCAACT TGCAAGTGAGTTACTTGATCGTTGATGAAATGCACAATGATCATCCGCAG TTGGTGAGGGATCAGTATTGGGATGAGGTGTTTCCCGCTGAGTTGCCATA TGCCGTGGAGTCCGATAGGGCCGAACATCCGGAGGCATCAACCGCTCGAT TGGGCATACCAAAAGTTGTCCCCGTGACCATGACGAAAAGCGAAGTCAGT TTGGAAAACGATTTTACAGAGTTCGACGATGAGGATGAATACAACCCGGA AGTAACTATACGATTTGCCCGCCGGGAGTTCAGTTGGAGCAAAAGTTCAG TATCGGTATCGTACTCCTATGACAACCAGAGTATTGATACCCTTGACGAG AAGGTTGATGAAGAGAACGAGGGAGATACAAGGACTCTAGATTCCAGAAA CAAGGACGACTTTGACCGTCTAAAGGAGAAGCGGGACAGGGAGCGTGTGA ACCGGCAGATGCAACAAGCCGCCCTCGCCATGGAGTTGATTAAAGGGGAT CTGGCTTCGAATGGAGGATCAGCTCGATCAAGTCGTACTAATGTCCCGCA AAAAAATTCTGATGTCCAGACCGACAGAAGCTACTTAAGTCAGAAAAAGA GAAAGGAGGAGGACACGGACAATGATAAGGACAGTGACGAATCTAAGAAA TAACGAATGAATCCTTAAAATGTACAGAAACAAATTGTGATTTTAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Best3-RA | 1764 | Best3-RA | 71..1764 | 1..1694 | 8470 | 100 | Plus |
Best1-RA | 3144 | Best1-RA | 1313..1507 | 892..1086 | 330 | 77.9 | Plus |
Best1-RB | 3288 | Best1-RB | 1313..1507 | 892..1086 | 330 | 77.9 | Plus |
Best1-RA | 3144 | Best1-RA | 1013..1116 | 601..704 | 220 | 80.7 | Plus |
Best1-RB | 3288 | Best1-RB | 1013..1116 | 601..704 | 220 | 80.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15290967..15291892 | 1694..769 | 4615 | 99.9 | Minus |
chr3L | 24539361 | chr3L | 15291939..15292484 | 773..228 | 2730 | 100 | Minus |
chr3L | 24539361 | chr3L | 15292722..15292837 | 116..1 | 580 | 100 | Minus |
chr3L | 24539361 | chr3L | 15292552..15292664 | 227..115 | 565 | 100 | Minus |
chr3R | 27901430 | chr3R | 5991050..5991153 | 704..601 | 220 | 80.8 | Minus |
chr3R | 27901430 | chr3R | 5990771..5990853 | 974..892 | 190 | 81.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15300913..15301840 | 1696..769 | 4640 | 100 | Minus |
3L | 28110227 | 3L | 15301887..15302432 | 773..228 | 2730 | 100 | Minus |
3L | 28110227 | 3L | 15302670..15302785 | 116..1 | 580 | 100 | Minus |
3L | 28110227 | 3L | 15302500..15302612 | 227..115 | 565 | 100 | Minus |
3R | 32079331 | 3R | 10165299..10165402 | 704..601 | 220 | 80.8 | Minus |
3R | 32079331 | 3R | 10165020..10165102 | 974..892 | 190 | 81.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15294013..15294940 | 1696..769 | 4640 | 100 | Minus |
3L | 28103327 | 3L | 15294987..15295532 | 773..228 | 2730 | 100 | Minus |
3L | 28103327 | 3L | 15295770..15295885 | 116..1 | 580 | 100 | Minus |
3L | 28103327 | 3L | 15295600..15295712 | 227..115 | 565 | 100 | Minus |
3R | 31820162 | 3R | 9906130..9906233 | 704..601 | 220 | 80.7 | Minus |
3R | 31820162 | 3R | 9905851..9905933 | 974..892 | 190 | 81.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15290967..15291889 | 772..1694 | 99 | <- | Minus |
chr3L | 15291941..15292484 | 228..771 | 100 | <- | Minus |
chr3L | 15292552..15292662 | 117..227 | 100 | <- | Minus |
chr3L | 15292722..15292837 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1608 | 46..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1608 | 46..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1608 | 46..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1608 | 46..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1608 | 46..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1608 | 46..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1694 | 1..1694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1694 | 1..1694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1608 | 46..1653 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Best3-RA | 1..1694 | 1..1694 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15300915..15301837 | 772..1694 | 100 | <- | Minus |
3L | 15301889..15302432 | 228..771 | 100 | <- | Minus |
3L | 15302500..15302610 | 117..227 | 100 | <- | Minus |
3L | 15302670..15302785 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15300915..15301837 | 772..1694 | 100 | <- | Minus |
3L | 15301889..15302432 | 228..771 | 100 | <- | Minus |
3L | 15302500..15302610 | 117..227 | 100 | <- | Minus |
3L | 15302670..15302785 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15300915..15301837 | 772..1694 | 100 | <- | Minus |
3L | 15301889..15302432 | 228..771 | 100 | <- | Minus |
3L | 15302500..15302610 | 117..227 | 100 | <- | Minus |
3L | 15302670..15302785 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15294015..15294937 | 772..1694 | 100 | <- | Minus |
arm_3L | 15294989..15295532 | 228..771 | 100 | <- | Minus |
arm_3L | 15295600..15295710 | 117..227 | 100 | <- | Minus |
arm_3L | 15295770..15295885 | 1..116 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15294015..15294937 | 772..1694 | 100 | <- | Minus |
3L | 15294989..15295532 | 228..771 | 100 | <- | Minus |
3L | 15295600..15295710 | 117..227 | 100 | <- | Minus |
3L | 15295770..15295885 | 1..116 | 100 | Minus |
Translation from 45 to 1652
> IP03529.hyp MTVSYTAEVATCSHFGCFWKLLMRWRASIYKIIWVDLLAFLSCFYFMAVI YRYALRDVDKPVFEDIVMYCHSYSNLIPLSFVLGFYVGIIIERWWNQYIT VPWPDPLAVYVSALVRGQDEHGRLMRRTIMRYVCLALTMVLSMISPVIKR RFPTYDQLIEVGLLNANEANIMKAMDVKFPKHPKYWMPIVWAASIVTRAR KEGRIWDDFSLKSMIDELNKFRAGCNMLIHYDTISVPLVYTQVVTLAVYS YFVASIFGHQWIDRDIKHYNNIVSYYFPLFSTLEFFFFMGWLKVAETLIC PFGDDDDDFELNWLIDRNLQVSYLIVDEMHNDHPQLVRDQYWDEVFPAEL PYAVESDRAEHPEASTARLGIPKVVPVTMTKSEVSLENDFTEFDDEDEYN PEVTIRFARREFSWSKSSVSVSYSYDNQSIDTLDEKVDEENEGDTRTLDS RNKDDFDRLKEKRDRERVNRQMQQAALAMELIKGDLASNGGSARSSRTNV PQKNSDVQTDRSYLSQKKRKEEDTDNDKDSDESKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Best3-PA | 535 | CG12327-PA | 1..535 | 1..535 | 2837 | 100 | Plus |
Best1-PA | 721 | CG6264-PA | 1..392 | 1..387 | 1389 | 64 | Plus |
Best1-PD | 736 | CG6264-PD | 1..392 | 1..387 | 1389 | 64 | Plus |
Best1-PB | 769 | CG6264-PB | 1..392 | 1..387 | 1389 | 64 | Plus |
Best1-PC | 784 | CG6264-PC | 1..392 | 1..387 | 1389 | 64 | Plus |
Translation from 45 to 1652
> IP03529.pep MTVSYTAEVATCSHFGCFWKLLMRWRASIYKIIWVDLLAFLSCFYFMAVI YRYALRDVDKPVFEDIVMYCHSYSNLIPLSFVLGFYVGIIIERWWNQYIT VPWPDPLAVYVSALVRGQDEHGRLMRRTIMRYVCLALTMVLSMISPVIKR RFPTYDQLIEVGLLNANEANIMKAMDVKFPKHPKYWMPIVWAASIVTRAR KEGRIWDDFSLKSMIDELNKFRAGCNMLIHYDTISVPLVYTQVVTLAVYS YFVASIFGHQWIDRDIKHYNNIVSYYFPLFSTLEFFFFMGWLKVAETLIC PFGDDDDDFELNWLIDRNLQVSYLIVDEMHNDHPQLVRDQYWDEVFPAEL PYAVESDRAEHPEASTARLGIPKVVPVTMTKSEVSLENDFTEFDDEDEYN PEVTIRFARREFSWSKSSVSVSYSYDNQSIDTLDEKVDEENEGDTRTLDS RNKDDFDRLKEKRDRERVNRQMQQAALAMELIKGDLASNGGSARSSRTNV PQKNSDVQTDRSYLSQKKRKEEDTDNDKDSDESKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10734-PA | 526 | GF10734-PA | 1..509 | 1..516 | 2045 | 73.2 | Plus |
Dana\GF17535-PA | 722 | GF17535-PA | 1..392 | 1..387 | 1454 | 64.5 | Plus |
Dana\GF23693-PA | 540 | GF23693-PA | 18..369 | 18..369 | 1199 | 59.1 | Plus |
Dana\GF10904-PA | 815 | GF10904-PA | 1..380 | 1..373 | 1022 | 48.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13553-PA | 537 | GG13553-PA | 1..537 | 1..535 | 2499 | 90.7 | Plus |
Dere\GG17296-PA | 769 | GG17296-PA | 1..392 | 1..387 | 1445 | 63.5 | Plus |
Dere\GG15891-PA | 526 | GG15891-PA | 1..367 | 1..367 | 1180 | 56.9 | Plus |
Dere\GG14064-PA | 809 | GG14064-PA | 1..380 | 1..373 | 1036 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17026-PA | 535 | GH17026-PA | 1..535 | 1..518 | 1754 | 65.2 | Plus |
Dgri\Rfp1-PA | 779 | GH18459-PA | 1..392 | 1..387 | 1468 | 64.3 | Plus |
Dgri\GH17028-PA | 561 | GH17028-PA | 1..451 | 1..470 | 1279 | 51.2 | Plus |
Dgri\GH16281-PA | 818 | GH16281-PA | 1..380 | 1..373 | 1040 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Best3-PA | 535 | CG12327-PA | 1..535 | 1..535 | 2837 | 100 | Plus |
Best1-PD | 736 | CG6264-PD | 1..392 | 1..387 | 1389 | 64 | Plus |
Best1-PC | 784 | CG6264-PC | 1..392 | 1..387 | 1389 | 64 | Plus |
Best1-PB | 769 | CG6264-PB | 1..392 | 1..387 | 1389 | 64 | Plus |
Best1-PA | 721 | CG6264-PA | 1..392 | 1..387 | 1389 | 64 | Plus |
Best4-PB | 526 | CG7259-PB | 1..462 | 1..470 | 1189 | 48.8 | Plus |
Best2-PA | 809 | CG10173-PA | 1..380 | 1..373 | 1003 | 48.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12230-PA | 541 | GI12230-PA | 1..541 | 1..522 | 1785 | 66.1 | Plus |
Dmoj\GI24037-PA | 782 | GI24037-PA | 1..392 | 1..387 | 1456 | 63.5 | Plus |
Dmoj\GI12232-PA | 510 | GI12232-PA | 1..442 | 1..470 | 1246 | 51.5 | Plus |
Dmoj\GI13224-PA | 803 | GI13224-PA | 1..355 | 1..373 | 952 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25692-PA | 514 | GL25692-PA | 1..494 | 1..491 | 1248 | 50 | Plus |
Dper\GL25671-PA | 215 | GL25671-PA | 1..203 | 1..203 | 967 | 86.2 | Plus |
Dper\GL22521-PA | 783 | GL22521-PA | 4..305 | 72..373 | 705 | 45.5 | Plus |
Dper\GL23840-PA | 215 | GL23840-PA | 25..136 | 278..387 | 416 | 64.3 | Plus |
Dper\GL25682-PA | 109 | GL25682-PA | 24..109 | 439..520 | 167 | 40.7 | Plus |
Dper\GL22521-PA | 783 | GL22521-PA | 1..45 | 1..46 | 166 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11558-PA | 522 | GA11558-PA | 1..522 | 1..520 | 2009 | 73 | Plus |
Dpse\GA19476-PA | 765 | GA19476-PA | 1..392 | 1..387 | 1465 | 64.5 | Plus |
Dpse\GA19476-PB | 721 | GA19476-PB | 1..392 | 1..387 | 1464 | 64.5 | Plus |
Dpse\GA20216-PA | 514 | GA20216-PA | 1..494 | 1..491 | 1248 | 50 | Plus |
Dpse\GA24547-PA | 841 | GA24547-PA | 1..380 | 1..373 | 1032 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24494-PA | 533 | GM24494-PA | 1..533 | 1..535 | 2784 | 97.6 | Plus |
Dsec\GM26180-PA | 767 | GM26180-PA | 1..392 | 1..387 | 1445 | 63.5 | Plus |
Dsec\GM25520-PA | 526 | GM25520-PA | 1..367 | 1..367 | 1204 | 57.2 | Plus |
Dsec\GM13845-PA | 809 | GM13845-PA | 1..380 | 1..373 | 1035 | 49 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12566-PA | 533 | GD12566-PA | 1..533 | 1..535 | 2788 | 97.8 | Plus |
Dsim\GD14535-PA | 526 | GD14535-PA | 1..367 | 1..367 | 1207 | 57.5 | Plus |
Dsim\GD13131-PA | 809 | GD13131-PA | 1..380 | 1..373 | 1039 | 49.2 | Plus |
Dsim\GD20729-PA | 417 | GD20729-PA | 1..83 | 302..380 | 291 | 61.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11462-PA | 556 | GJ11462-PA | 1..556 | 1..520 | 1800 | 65.7 | Plus |
Dvir\GJ23667-PA | 780 | GJ23667-PA | 1..392 | 1..387 | 1462 | 64 | Plus |
Dvir\GJ11464-PA | 530 | GJ11464-PA | 1..370 | 1..369 | 1241 | 61.4 | Plus |
Dvir\GJ11999-PA | 822 | GJ11999-PA | 1..372 | 1..365 | 1032 | 50.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20484-PA | 564 | GK20484-PA | 1..511 | 1..509 | 1893 | 69.5 | Plus |
Dwil\GK22536-PA | 744 | GK22536-PA | 1..392 | 1..387 | 1467 | 64.8 | Plus |
Dwil\GK20485-PA | 464 | GK20485-PA | 1..463 | 1..446 | 1212 | 52.4 | Plus |
Dwil\GK13577-PA | 838 | GK13577-PA | 1..378 | 1..373 | 1034 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19853-PA | 535 | GE19853-PA | 1..522 | 1..521 | 2561 | 92.9 | Plus |
Dyak\GE24699-PA | 769 | GE24699-PA | 1..392 | 1..387 | 1442 | 63.5 | Plus |
Dyak\GE22233-PA | 526 | GE22233-PA | 1..369 | 1..369 | 1181 | 56.6 | Plus |
Dyak\GE20488-PA | 809 | GE20488-PA | 1..380 | 1..373 | 1034 | 49 | Plus |