Clone IP03636 Report

Search the DGRC for IP03636

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:36
Well:36
Vector:pOT2
Associated Gene/TranscriptCyp9h1-RA
Protein status:IP03636.pep: gold
Preliminary Size:1557
Sequenced Size:1628

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17577 2005-01-01 Successful iPCR screen
Cyp9h1 2008-04-29 Stopped prior to 5.5

Clone Sequence Records

IP03636.complete Sequence

1628 bp assembled on 2011-04-14

GenBank Submission: BT126322.1

> IP03636.complete
GTTCAATTAGTCGCTCTCACATATGACATCATGGATCAGTCGATGATAGC
ACTCGCTTTGTTTATAATACTGCTCGTTTTGCTCTACAAGTGGTCGGTGG
CCAAATATGATGTGTTCAGTGAAAGGGGTGTGTCACATGAGAAGCCATGG
CCTCTAATTGGCAATATTCCGCTGAAAGCCATGATCGGTGGAATGCCAGT
ACTAAAGAAAATGATCGAATTGCATACGAAACACACGGGATCCCCGGTAT
ATGGTATCTACGCCCTTCGAGATGCCGTCTTCTTTGTCCGAGACCCTGAG
CTCATCAAGCTCATCGGCATCAAGGAATTCGACCACTTCGTTAACCACAA
TAGCATGCACAACAATATACAGGAGTCGATACTCTCGAAAAGTCTCATTT
CGCTGCGCGATGGTCGATGGAAGGAGATGCGCAATATCCTGACACCCGCA
TTTACGGGGAGCAAAATGCGGATAATGTACGACCTGATCCAATCGTGCAG
CGAGGAGGGCGTTATCCACATACAGGAGCAGTTGGAGCTGTCGCAGGACG
CGAGCATCGAACTGGAAATGAAGGATTACTTCACGCGATTCGCCAACGAT
GTGATTGCTACGGTGGCCTTCGGCATCAGCATCAACTCGTTCAGGCGCAA
AGATAACGAGTTCTTCCGCATCGGACAAGCCATGTCCAGGATTAGCGCCT
GGTCGGTGGTCAAGGCCATGCTATATGCCCTCTTTCCACGACTGATGAAG
GTTCTCCGCATCCAGGTGCTGGACACCAAGAACATTGATTACTTCAGCAG
CCTGGTCACCGCGGCGATGAGGTACCGCCAGGAGCACAAAGTGGTTAGGC
CGGATATGATCCACCTGCTGATGGAGGCAAAGCAGCAGAGGCTTGCCGAT
CTGAGTGATAAGTCGAAGGATGAGCTATACTATTCCGAGTTCACCGCCGA
TGACTTGCTGGCCCAGTGTCTGCTATTCTTCTTTGCCGGCTTTGAGATTA
TCTCGTCGTCCTTGTGCTTCCTCACCCATGAACTCTGCTTGAATCCCACG
GTGCAGGACAGGTTGTATGAGGAGATCATTTCCGTGCACGAAGAGCTGAA
AGGTCAACCCCTGACCTATGACAAGCTGACCAAGATGAAGTATCTGGACA
TGGTGGTACTCGAAGCACTGCGTAAATGGCCACCATCGATTTCCACCGAT
CGTGAGTGCCGTCAGGATATTGATTTGTTCGATGAAAATGGTCAGAAGTT
GTTCTCCGCCCGAAAGGGTGATGTCTTGCAAATACCTATCTTCTCGCTCC
ATCACGATCCCGAGAACTTCGAGGATCCGGAGTTCTTCAATCCGGAGCGC
TTCGCAGATGGTCATGCTCTAGAGTCCCGTGTTTACATGCCCTTCGGAGT
GGGTCCTCGCAACTGCATTGGCAATCGAATGGCACTGATGGAGCTCAAAT
CAATAGTATACCAGTTGCTTTTAAATTTCAAACTATTGCCAGCTAAAAGG
ACTTCTCGCGATTTGCTGAACGACATAAGGGGTCATGGTTTGAAGCCGAA
GAATGGCTTCTGGCTGAAGTTCGAGGCACGTCAATAAAGTCTTATGCATC
GGAGCCAACTAAAAAAAAAAAAAAAAAA

IP03636.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:16:19
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 8728113..8728974 1610..749 4205 99.2 Minus
chr2R 21145070 chr2R 8729100..8729851 752..1 3745 99.9 Minus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:16:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12840811..12841674 1612..749 4320 100 Minus
2R 25286936 2R 12841800..12842551 752..1 3760 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 23:10:55
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 12842010..12842873 1612..749 4320 100 Minus
2R 25260384 2R 12842999..12843750 752..1 3760 100 Minus
Blast to na_te.dros performed on 2019-03-16 23:16:17 has no hits.

IP03636.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:17:25 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 8728113..8728972 751..1610 99 <- Minus
chr2R 8729102..8729851 1..750 99   Minus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-04-14 17:18:39 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp9h1-RA 1..1557 31..1587 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:05:25 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp9h1-RA 1..1557 31..1587 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:36:53 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp9h1-RA 1..1557 31..1587 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-04-14 17:18:39 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp9h1-RA 8..1617 1..1610 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:05:25 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp9h1-RA 8..1617 1..1610 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:36:53 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp9h1-RA 8..1617 1..1610 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:17:25 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12840813..12841672 751..1610 100 <- Minus
2R 12841802..12842551 1..750 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:17:25 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12840813..12841672 751..1610 100 <- Minus
2R 12841802..12842551 1..750 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:17:25 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12840813..12841672 751..1610 100 <- Minus
2R 12841802..12842551 1..750 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:05:25 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8728318..8729177 751..1610 100 <- Minus
arm_2R 8729307..8730056 1..750 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 20:05:42 Download gff for IP03636.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12842012..12842871 751..1610 100 <- Minus
2R 12843001..12843750 1..750 100   Minus

IP03636.pep Sequence

Translation from 0 to 1586

> IP03636.pep
VQLVALTYDIMDQSMIALALFIILLVLLYKWSVAKYDVFSERGVSHEKPW
PLIGNIPLKAMIGGMPVLKKMIELHTKHTGSPVYGIYALRDAVFFVRDPE
LIKLIGIKEFDHFVNHNSMHNNIQESILSKSLISLRDGRWKEMRNILTPA
FTGSKMRIMYDLIQSCSEEGVIHIQEQLELSQDASIELEMKDYFTRFAND
VIATVAFGISINSFRRKDNEFFRIGQAMSRISAWSVVKAMLYALFPRLMK
VLRIQVLDTKNIDYFSSLVTAAMRYRQEHKVVRPDMIHLLMEAKQQRLAD
LSDKSKDELYYSEFTADDLLAQCLLFFFAGFEIISSSLCFLTHELCLNPT
VQDRLYEEIISVHEELKGQPLTYDKLTKMKYLDMVVLEALRKWPPSISTD
RECRQDIDLFDENGQKLFSARKGDVLQIPIFSLHHDPENFEDPEFFNPER
FADGHALESRVYMPFGVGPRNCIGNRMALMELKSIVYQLLLNFKLLPAKR
TSRDLLNDIRGHGLKPKNGFWLKFEARQ*

IP03636.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 18:47:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12005-PA 518 GF12005-PA 1..517 11..527 2051 71.5 Plus
Dana\GF12997-PA 519 GF12997-PA 4..519 16..527 1388 50.2 Plus
Dana\GF17048-PA 515 GF17048-PA 6..515 18..527 1133 42.2 Plus
Dana\GF12248-PA 501 GF12248-PA 11..501 22..528 1098 41.5 Plus
Dana\GF12249-PA 501 GF12249-PA 6..501 16..528 1090 41.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 18:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22550-PA 518 GG22550-PA 1..518 11..528 2521 89 Plus
Dere\GG22995-PA 522 GG22995-PA 4..519 16..527 1369 50.3 Plus
Dere\GG17131-PA 516 GG17131-PA 16..515 28..527 1100 42.6 Plus
Dere\GG10771-PA 505 GG10771-PA 6..505 16..528 1030 41 Plus
Dere\GG10770-PA 328 GG10770-PA 1..328 190..528 790 43.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 18:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20130-PA 514 GH20130-PA 3..508 15..528 1517 54.8 Plus
Dgri\GH20129-PA 523 GH20129-PA 17..521 29..528 1409 49.9 Plus
Dgri\GH20326-PA 524 GH20326-PA 9..524 20..528 1311 49.3 Plus
Dgri\GH20382-PA 505 GH20382-PA 3..505 15..528 1093 40.5 Plus
Dgri\GH18868-PA 515 GH18868-PA 17..515 29..528 1030 40.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:23
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp9h1-PA 518 CG17577-PA 1..518 11..528 2681 100 Plus
Cyp9c1-PA 522 CG3616-PA 4..519 16..527 1332 50.1 Plus
Cyp9f2-PA 516 CG11466-PA 7..515 19..527 1090 43.2 Plus
Cyp9b2-PA 505 CG4486-PA 6..505 16..528 1033 40.5 Plus
Cyp9b1-PA 505 CG4485-PA 2..505 14..528 1003 39.1 Plus
Cyp9f3-PB 433 CG17875-PB 6..386 18..406 804 42.4 Plus
Cyp6a17-PB 501 CG10241-PB 1..497 15..525 606 31.9 Plus
Cyp6a17-PA 501 CG10241-PA 1..497 15..525 606 31.9 Plus
Cyp6a2-PA 506 CG9438-PA 1..504 20..525 602 31.7 Plus
Cyp6g1-PB 524 CG8453-PB 7..509 20..523 594 31.2 Plus
Cyp6g1-PA 524 CG8453-PA 7..509 20..523 594 31.2 Plus
Cyp6a13-PA 493 CG2397-PA 13..488 23..525 592 31.4 Plus
Cyp6a23-PA 502 CG10242-PA 3..498 16..525 588 31.9 Plus
Cyp6a14-PE 509 CG8687-PE 2..507 15..525 583 30.6 Plus
Cyp6a14-PC 509 CG8687-PC 2..507 15..525 583 30.6 Plus
Cyp6g2-PA 519 CG8859-PA 3..511 15..523 581 29.8 Plus
Cyp6a18-PB 507 CG13977-PB 3..506 6..526 562 30.6 Plus
Cyp6a18-PA 507 CG13977-PA 3..506 6..526 562 30.6 Plus
Cyp6d4-PA 515 CG12800-PA 3..510 14..527 558 28.5 Plus
Cyp6w1-PB 514 CG8345-PB 1..483 15..505 553 28.2 Plus
Cyp6w1-PA 514 CG8345-PA 1..483 15..505 553 28.2 Plus
Cyp6a22-PC 499 CG10240-PC 5..492 18..525 551 29.7 Plus
Cyp6a22-PB 499 CG10240-PB 5..492 18..525 551 29.7 Plus
Cyp6a22-PA 499 CG10240-PA 5..492 18..525 551 29.7 Plus
Cyp6a8-PA 506 CG10248-PA 1..504 4..525 548 30 Plus
Cyp6a19-PA 503 CG10243-PA 3..486 16..506 545 30.5 Plus
Cyp6d5-PA 508 CG3050-PA 1..499 15..519 541 29.5 Plus
Cyp6d2-PA 512 CG4373-PA 1..485 15..500 523 28 Plus
Cyp6a20-PB 501 CG10245-PB 1..467 15..494 508 29 Plus
Cyp6t1-PA 529 CG1644-PA 29..524 22..524 506 27.1 Plus
Cyp6a21-PA 504 CG10247-PA 5..502 14..525 499 28.5 Plus
Cyp6v1-PC 520 CG1829-PC 8..518 18..525 497 26.8 Plus
Cyp6v1-PB 520 CG1829-PB 8..518 18..525 497 26.8 Plus
Cyp6v1-PA 520 CG1829-PA 8..518 18..525 497 26.8 Plus
Cyp6a16-PC 500 CG7249-PC 5..493 18..525 491 28.3 Plus
Cyp6a16-PB 500 CG7249-PB 5..493 18..525 491 28.3 Plus
Cyp6a9-PB 504 CG10246-PB 6..502 16..525 490 27.8 Plus
Cyp28c1-PB 505 CG1895-PB 12..500 24..528 442 25.6 Plus
Cyp28c1-PA 505 CG1895-PA 12..500 24..528 442 25.6 Plus
Cyp28d2-PA 501 CG6081-PA 8..499 18..525 439 24.3 Plus
Cyp317a1-PC 518 CG17453-PC 11..494 20..507 413 27 Plus
Cyp317a1-PB 518 CG17453-PB 11..494 20..507 413 27 Plus
Cyp317a1-PA 518 CG17453-PA 11..494 20..507 413 27 Plus
Cyp6t3-PA 501 CG8457-PA 1..496 15..524 411 25.5 Plus
Cyp6a19-PB 367 CG10243-PB 3..361 16..386 404 29.6 Plus
Cyp28d1-PA 502 CG10833-PA 4..501 16..527 398 24 Plus
Cyp28a5-PA 505 CG8864-PA 3..503 15..525 397 25.3 Plus
Cyp4d14-PB 510 CG3540-PB 3..508 18..517 381 26.5 Plus
Cyp4d14-PA 507 CG3540-PA 3..505 18..517 379 26.6 Plus
Cyp4d2-PB 501 CG3466-PB 35..500 48..527 361 25.4 Plus
Cyp4d2-PA 501 CG3466-PA 35..500 48..527 361 25.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 18:47:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20222-PA 514 GI20222-PA 3..509 15..528 1541 55.2 Plus
Dmoj\GI20221-PA 518 GI20221-PA 17..516 29..528 1413 50.4 Plus
Dmoj\GI19997-PA 532 GI19997-PA 1..529 15..528 1392 48.7 Plus
Dmoj\GI20052-PA 505 GI20052-PA 17..505 29..528 1097 42.9 Plus
Dmoj\GI24725-PA 514 GI24725-PA 17..514 29..528 1097 41.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 18:47:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17457-PA 520 GL17457-PA 19..520 29..528 2008 71.9 Plus
Dper\GL10233-PA 531 GL10233-PA 5..522 16..527 1345 49.4 Plus
Dper\GL10951-PA 505 GL10951-PA 1..505 15..528 1068 41.7 Plus
Dper\GL27180-PA 517 GL27180-PA 6..516 18..527 1062 40.2 Plus
Dper\GL10369-PA 509 GL10369-PA 16..507 29..525 619 31.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 18:47:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14564-PA 520 GA14564-PA 19..520 29..528 1993 71.5 Plus
Dpse\GA17561-PA 531 GA17561-PA 5..522 16..527 1342 49.4 Plus
Dpse\GA18217-PA 505 GA18217-PA 1..505 15..528 1071 41.9 Plus
Dpse\GA26760-PA 517 GA26760-PA 6..516 18..527 1060 40.2 Plus
Dpse\GA15364-PA 493 GA15364-PA 5..464 18..501 616 32.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 18:47:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20334-PA 518 GM20334-PA 1..518 11..528 2683 95.8 Plus
Dsec\GM11888-PA 522 GM11888-PA 4..519 16..527 1381 50.9 Plus
Dsec\GM26014-PA 516 GM26014-PA 17..515 29..527 1123 43.3 Plus
Dsec\GM20817-PA 505 GM20817-PA 6..505 16..528 1069 41.3 Plus
Dsec\GM20680-PA 509 GM20680-PA 2..508 15..526 620 31.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:47:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25811-PA 502 GD25811-PA 1..502 11..528 2569 92.1 Plus
Dsim\GD11886-PA 522 GD11886-PA 4..519 16..527 1378 51.1 Plus
Dsim\GD20572-PA 516 GD20572-PA 17..515 29..527 1124 43.3 Plus
Dsim\GD10273-PA 505 GD10273-PA 6..505 16..528 1074 41.1 Plus
Dsim\GD10274-PA 495 GD10274-PA 6..495 16..528 1008 39.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 18:47:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20172-PA 514 GJ20172-PA 3..508 15..528 1505 56.6 Plus
Dvir\GJ20171-PA 518 GJ20171-PA 3..516 15..528 1466 51.4 Plus
Dvir\GJ21246-PA 526 GJ21246-PA 9..523 20..528 1384 50.4 Plus
Dvir\GJ14552-PA 514 GJ14552-PA 6..514 18..528 1146 43.2 Plus
Dvir\GJ10877-PA 514 GJ10877-PA 6..514 18..528 1138 43.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 18:47:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14534-PA 524 GK14534-PA 24..520 29..525 1787 63.3 Plus
Dwil\GK21423-PA 525 GK21423-PA 1..522 15..528 1313 48.6 Plus
Dwil\GK11195-PA 514 GK11195-PA 6..514 18..528 1118 42.2 Plus
Dwil\GK21528-PA 505 GK21528-PA 6..505 16..528 1046 40.1 Plus
Dwil\GK21509-PA 509 GK21509-PA 3..507 21..525 646 32.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 18:47:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13420-PA 518 GE13420-PA 1..518 11..528 2517 90.5 Plus
Dyak\GE14432-PA 524 GE14432-PA 4..521 16..527 1356 49.3 Plus
Dyak\GE24523-PA 516 GE24523-PA 6..515 18..527 1143 43.7 Plus
Dyak\GE24213-PA 505 GE24213-PA 6..505 16..528 1085 41.7 Plus
Dyak\GE24465-PA 506 GE24465-PA 3..480 16..501 652 33.6 Plus

IP03636.hyp Sequence

Translation from 0 to 1586

> IP03636.hyp
VQLVALTYDIMDQSMIALALFIILLVLLYKWSVAKYDVFSERGVSHEKPW
PLIGNIPLKAMIGGMPVLKKMIELHTKHTGSPVYGIYALRDAVFFVRDPE
LIKLIGIKEFDHFVNHNSMHNNIQESILSKSLISLRDGRWKEMRNILTPA
FTGSKMRIMYDLIQSCSEEGVIHIQEQLELSQDASIELEMKDYFTRFAND
VIATVAFGISINSFRRKDNEFFRIGQAMSRISAWSVVKAMLYALFPRLMK
VLRIQVLDTKNIDYFSSLVTAAMRYRQEHKVVRPDMIHLLMEAKQQRLAD
LSDKSKDELYYSEFTADDLLAQCLLFFFAGFEIISSSLCFLTHELCLNPT
VQDRLYEEIISVHEELKGQPLTYDKLTKMKYLDMVVLEALRKWPPSISTD
RECRQDIDLFDENGQKLFSARKGDVLQIPIFSLHHDPENFEDPEFFNPER
FADGHALESRVYMPFGVGPRNCIGNRMALMELKSIVYQLLLNFKLLPAKR
TSRDLLNDIRGHGLKPKNGFWLKFEARQ*

IP03636.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp9h1-PA 518 CG17577-PA 1..518 11..528 2681 100 Plus
Cyp9c1-PA 522 CG3616-PA 4..519 16..527 1332 50.1 Plus
Cyp9f2-PA 516 CG11466-PA 7..515 19..527 1090 43.2 Plus
Cyp9b2-PA 505 CG4486-PA 6..505 16..528 1033 40.5 Plus
Cyp9b1-PA 505 CG4485-PA 2..505 14..528 1003 39.1 Plus