BDGP Sequence Production Resources |
Search the DGRC for IP03973
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 39 |
Well: | 73 |
Vector: | pOT2 |
Associated Gene/Transcript | Rad1-RA |
Protein status: | IP03973.pep2: gold IP03973.pep: gold |
Preliminary Size: | 1495 |
Sequenced Size: | 1502 |
Gene | Date | Evidence |
---|---|---|
CG3240 | 2005-01-01 | Successful iPCR screen |
Rad1 | 2008-04-29 | Release 5.5 accounting |
Rad1 | 2008-08-15 | Release 5.9 accounting |
CG34314 | 2008-08-15 | Release 5.9 accounting |
Rad1 | 2008-12-18 | 5.12 accounting |
CG34314 | 2008-12-18 | 5.12 accounting |
1502 bp (1502 high quality bases) assembled on 2006-01-24
GenBank Submission: BT024410.1
> IP03973.complete CCTGACGACTTTTTGGCGGTATTGTTTATAAACAAAATTCACTTAAGAAA CTGGATTTAATAATGTCCTGAATGGCGTCCGAGTCAGAAAACACTACATC CTATTTTGTTCCGCATCTGGTTGATCAAGTCTTCGAATTATATCGGAGTA AAGCAGAGTCCAACAGCCTTACAAAAGAGGAACGCGGACAGTTCTTTTAC GATCTATCCATTTTATTGGGCCAAGAACTGGTCCTGCGATCGCTACACCT CTTGGACGACCACAACTTCTCCTTCTTCCACGCCAAGAACAATCGATCCG TGTGCGTGGTAGAAATTTCCAAGGGAACCGAGTACTTCCGCTTGATTCCG GGCGTAAGTTTCTGCAAGTGTGAGTTCTTCCAGTGCCACGTGCTGCAGTT GCCGCGAGGCATCCTCTACCAGGACCTTCCCAGTGGCGAACCGGGCATTT TAGAGGATTGGAGCGAGGAGAGCCGGGTGTCCTACACCTGCCAGCACATC CTGGCATTGCGGCTCCATCAATTTCTGAAGCACACGGGCGGGAAAACCAC CGAGAAGATCCTTAAGAAAGAGGATATCAAGGAGCTGCGGACGGACGTCT TTCGGGACTAGGATGACTGATGTGGAGCCATCGCCCTACGGCGACTGCAA ATTCGTCGCTCGAGTGGAGCACATCAAGACCTTCATCCAGGCCATCAAGT CAATCTGCTTTAATGATTATGGGATGGTGCAAGTCTCCGAAGATGGTCTG CGCATCACCGTGGAGCAGGGCAAGTCCATCCAGGCAACGCTTTTCATGCC GCCGGGTGCCTTCATGGAGTTCCGTGTGCAGGACTTCCAGTGCTTCGGTG TGAAAATGAATGTGCTGTCCGAGTGTCTCAGTCTCTTCGGATCCGCCGAT TGCAGCCTGCGAATGATGTACAGGGATAAGGGCGATCCCCTGAAGATAAT TCTGTATCCGCACGACGACGATGATGTGAGCACGGAGTGCGCCATCAAAA CCATGGACTGCGATGAGCCCATTGACTACGATCAGAATCTGAAGGATCCG GATCTTAATGTTATTTTCGTACGCGGACCGAACCTATCGAAGGTGTTCAA TGAGCTGGAGAAGTCCGCGGAGGAGTTCGAGTTCGTGACATCGCCGAACC GCCCGCACTTTAAGATCACCACAGTGGGGATCATGCAGGCGGTGTTCAGC GTCGAAGTGGCAAAGACGAGTCCCATGATGATGATGTTTAACTGCAAACA GACGGTGGTGGCTCGCTACAAGAGCCAGCAGATCCGCATGACCAACAAGG CGATGCAGTCGGCCACCAAGGTGGCCATTAAAACGAACTCCGTTGGCCTC CTAGAACTGCATCTGGTAATGCAGGGCGATAGCCAGGAGGAGATATTCAT TCAGTTCTTCATAATTCCTTTGCTCAACACTGATTAAACCGAAACTACTA GGTAGCTAATAAAATAGAACTTTAAAATATTGCTAAAAAAAAAAAAAAAA AA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2573229..2573995 | 1484..718 | 3835 | 100 | Minus |
chr2L | 23010047 | chr2L | 2574069..2574610 | 717..176 | 2710 | 100 | Minus |
chr2L | 23010047 | chr2L | 2574669..2574845 | 177..1 | 885 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2573432..2574202 | 1488..718 | 3855 | 100 | Minus |
2L | 23513712 | 2L | 2574276..2574817 | 717..176 | 2710 | 100 | Minus |
2L | 23513712 | 2L | 2574876..2575052 | 177..1 | 885 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
G5A | 2841 | G5A G5A 2841bp | 1400..1438 | 323..284 | 116 | 80 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2573229..2573995 | 718..1484 | 100 | <- | Minus |
chr2L | 2574069..2574608 | 178..717 | 100 | <- | Minus |
chr2L | 2574669..2574845 | 1..177 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rad1-RA | 1..825 | 613..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rad1-RA | 1..825 | 613..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rad1-RA | 1..825 | 613..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rad1-RA | 1..825 | 613..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rad1-RA | 1..825 | 613..1437 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34314-RA | 29..1512 | 1..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34314-RA | 29..1512 | 1..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Rad1-RA | 1..1484 | 1..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34314-RA | 29..1512 | 1..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG34314-RA | 1..1484 | 1..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2573436..2574202 | 718..1484 | 100 | <- | Minus |
2L | 2574276..2574815 | 178..717 | 100 | <- | Minus |
2L | 2574876..2575052 | 1..177 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2573436..2574202 | 718..1484 | 100 | <- | Minus |
2L | 2574276..2574815 | 178..717 | 100 | <- | Minus |
2L | 2574876..2575052 | 1..177 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2573436..2574202 | 718..1484 | 100 | <- | Minus |
2L | 2574276..2574815 | 178..717 | 100 | <- | Minus |
2L | 2574876..2575052 | 1..177 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2573436..2574202 | 718..1484 | 100 | <- | Minus |
arm_2L | 2574276..2574815 | 178..717 | 100 | <- | Minus |
arm_2L | 2574876..2575052 | 1..177 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2573436..2574202 | 718..1484 | 100 | <- | Minus |
2L | 2574276..2574815 | 178..717 | 100 | <- | Minus |
2L | 2574876..2575052 | 1..177 | 100 | Minus |
Translation from 71 to 610
> IP03973.pep2 MASESENTTSYFVPHLVDQVFELYRSKAESNSLTKEERGQFFYDLSILLG QELVLRSLHLLDDHNFSFFHAKNNRSVCVVEISKGTEYFRLIPGVSFCKC EFFQCHVLQLPRGILYQDLPSGEPGILEDWSEESRVSYTCQHILALRLHQ FLKHTGGKTTEKILKKEDIKELRTDVFRD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24507-PA | 179 | GG24507-PA | 1..179 | 1..179 | 837 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sws1-PA | 179 | CG34314-PA | 1..179 | 1..179 | 941 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26459-PA | 175 | GL26459-PA | 1..175 | 1..179 | 490 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28870-PA | 175 | GA28870-PA | 1..175 | 1..179 | 490 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18216-PA | 179 | GM18216-PA | 1..179 | 1..179 | 923 | 96.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22822-PA | 179 | GD22822-PA | 1..179 | 1..179 | 917 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10151-PA | 144 | GJ10151-PA | 6..144 | 37..179 | 182 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13471-PA | 184 | GK13471-PA | 11..161 | 4..152 | 180 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15079-PA | 165 | GE15079-PA | 1..165 | 1..179 | 735 | 79.3 | Plus |
Translation from 612 to 1436
> IP03973.hyp MTDVEPSPYGDCKFVARVEHIKTFIQAIKSICFNDYGMVQVSEDGLRITV EQGKSIQATLFMPPGAFMEFRVQDFQCFGVKMNVLSECLSLFGSADCSLR MMYRDKGDPLKIILYPHDDDDVSTECAIKTMDCDEPIDYDQNLKDPDLNV IFVRGPNLSKVFNELEKSAEEFEFVTSPNRPHFKITTVGIMQAVFSVEVA KTSPMMMMFNCKQTVVARYKSQQIRMTNKAMQSATKVAIKTNSVGLLELH LVMQGDSQEEIFIQFFIIPLLNTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rad1-PA | 274 | CG3240-PA | 1..274 | 1..274 | 1423 | 100 | Plus |
Translation from 612 to 1436
> IP03973.pep MTDVEPSPYGDCKFVARVEHIKTFIQAIKSICFNDYGMVQVSEDGLRITV EQGKSIQATLFMPPGAFMEFRVQDFQCFGVKMNVLSECLSLFGSADCSLR MMYRDKGDPLKIILYPHDDDDVSTECAIKTMDCDEPIDYDQNLKDPDLNV IFVRGPNLSKVFNELEKSAEEFEFVTSPNRPHFKITTVGIMQAVFSVEVA KTSPMMMMFNCKQTVVARYKSQQIRMTNKAMQSATKVAIKTNSVGLLELH LVMQGDSQEEIFIQFFIIPLLNTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20598-PA | 272 | GF20598-PA | 4..272 | 6..274 | 1241 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24508-PA | 274 | GG24508-PA | 1..274 | 1..274 | 1425 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23116-PA | 274 | GH23116-PA | 5..272 | 7..274 | 905 | 60.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rad1-PA | 274 | CG3240-PA | 1..274 | 1..274 | 1423 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10298-PA | 274 | GI10298-PA | 5..272 | 7..274 | 909 | 60.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26460-PA | 271 | GL26460-PA | 7..268 | 11..272 | 1187 | 80.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16873-PA | 271 | GA16873-PA | 7..268 | 11..272 | 1196 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18217-PA | 256 | GM18217-PA | 1..238 | 1..238 | 1261 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22824-PA | 231 | GD22824-PA | 1..106 | 131..236 | 564 | 100 | Plus |
Dsim\GD22823-PA | 110 | GD22823-PA | 1..92 | 1..92 | 475 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10152-PA | 274 | GJ10152-PA | 5..272 | 7..274 | 920 | 61.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15006-PA | 272 | GK15006-PA | 5..272 | 7..274 | 949 | 62.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15082-PA | 274 | GE15082-PA | 1..274 | 1..274 | 1406 | 94.9 | Plus |