BDGP Sequence Production Resources |
Search the DGRC for IP04049
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 40 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | comm3-RC |
Protein status: | IP04049.pep: gold |
Preliminary Size: | 486 |
Sequenced Size: | 1397 |
Gene | Date | Evidence |
---|---|---|
CG13446 | 2005-01-01 | Successful iPCR screen |
comm3 | 2008-04-29 | Release 5.5 accounting |
comm3 | 2008-08-15 | Release 5.9 accounting |
comm3 | 2008-12-18 | 5.12 accounting |
1397 bp (1397 high quality bases) assembled on 2006-01-20
GenBank Submission: BT024408
> IP04049.complete AAACGGTCACGTTTGGCGGCTTCAGTTTATATGTACGTTCTCGTGCCAAA TTTCAGTAAATAATAAACTGGTACAGTGATTGATTGATTGATGGACTTGT TGAGTGAGTGAGCTGCAATCATGGCTAATTACACAGTGGTGCGTGTGACA AAAGTGCAACCATACCTGCATGTGGTGGACAGTGGTTATGCAGCTTTAGC CCATGTCGATAGCTTTTATGCGCCGACCTTGGAGGCCGGATTACTGGATT TCCATGCAAATGGCACTGCGACCCATGCCAATTTAACGGCGGAAAGAGTC CTCGTCCTCATCGGCGAGGAAAACTACAGCTATCGATCGACCTCGACCAT AGTCCTCATGGTTTCCGCCTGGATCCTGCTCATTCTGGGCTTTGTCTTCT GCTGCTGCGCCGAGTGCTGTGGCGTCAGCGTGTGGCGTGGCAAAAAGACA CGGTCCAGCATCGATATCGATGGCTTAAATCAGGCGGAACAAGGTGGAAA TGGAAATGGGAGTGCCTCCGCCCGCGATGCAACTGCAGACCGTGCCAATC ACAGTGATCCCACGATCGAGATCTGCCGCCGCTGTCCGCCGGACTACGAG GCGGAGTCCCTGCCCTCGTACACGATTGTTTCCGGACTGCCGACGTACGA TGATGCACTGGAGGAGTTCCGCAAGGCGGGCATTATCCTCACACCCGCCA TGGTGCCCATCATCAAGATCTTCGAGTGCAACGAGACCGGCAAGGAGCAG GCGGTGGGCTACAGCCTGGTGGAGACGAACATAGCGAGTGCGGATGCTGC CGCGGATAATGTGTCGCTGGCCTCGACCACCTGCAATTGTGGCAACTCCT CGCCCACCTCATCGCTGCCCAGTTACAGTGCCGCCACGGCGGCTGTGATG GCAGCGGCGGCTGCTGCTCCTCCCCAGGTGATCGAACTATCACCGGAACA CCTGGCCTCGTTGTCCCAGAAGCGTCTCTCCCTGCAGATCTCATTCAATA ACTCGGTGCGCCGGCAGTCGCCGCTCAGGAATCATCTGCTGAGATCCCGA GCGGTGGGAAATACCGCCGGTGTTGGTCCATCGGAGGCAGCCGGTCCTGC CATTCACGGGTCGGGAGCTCACGGAGTCCATGGCGGCGGAGGTGCAACCA TTCTGCCCGTTCTGCATCGCTCCTCCTCTACAATTTCACTGTCCAACGAA CGCCAGTTGCTGGATCAACGCCTCAGGCATTTGCATCATCGCGGTTCCCT CTACTGAGAACCCATATAGAGCATTCAAACTGCCTGACTAATCCTTCCTA AAGGGTATTCCCTATGTTAATCATATGCCAAGAGTTGTTAGTTTTAAGAC ACAGACATAATAAACATGCGTTGTTTTGAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15603110..15603950 | 539..1378 | 99 | <- | Minus |
chr3L | 15637100..15637637 | 1..538 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 1..1137 | 121..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 1..1137 | 121..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 1..1137 | 121..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 1..1137 | 121..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 1..1137 | 121..1257 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 1..1377 | 1..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 1..1377 | 1..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 26..1402 | 1..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 1..1377 | 1..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
comm3-RC | 26..1402 | 1..1377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15613182..15614022 | 539..1378 | 99 | <- | Minus |
3L | 15647200..15647737 | 1..538 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15613182..15614022 | 539..1378 | 99 | <- | Minus |
3L | 15647200..15647737 | 1..538 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15613182..15614022 | 539..1378 | 99 | <- | Minus |
3L | 15647200..15647737 | 1..538 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15606282..15607122 | 539..1378 | 99 | <- | Minus |
arm_3L | 15640300..15640837 | 1..538 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15606282..15607122 | 539..1378 | 99 | <- | Minus |
3L | 15640300..15640837 | 1..538 | 100 | Minus |
Translation from 120 to 1256
> IP04049.pep MANYTVVRVTKVQPYLHVVDSGYAALAHVDSFYAPTLEAGLLDFHANGTA THANLTAERVLVLIGEENYSYRSTSTIVLMVSAWILLILGFVFCCCAECC GVSVWRGKKTRSSIDIDGLNQAEQGGNGNGSASARDATADRANHSDPTIE ICRRCPPDYEAESLPSYTIVSGLPTYDDALEEFRKAGIILTPAMVPIIKI FECNETGKEQAVGYSLVETNIASADAAADNVSLASTTCNCGNSSPTSSLP SYSAATAAVMAAAAAAPPQVIELSPEHLASLSQKRLSLQISFNNSVRRQS PLRNHLLRSRAVGNTAGVGPSEAAGPAIHGSGAHGVHGGGGATILPVLHR SSSTISLSNERQLLDQRLRHLHHRGSLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10388-PA | 254 | GF10388-PA | 7..159 | 141..291 | 530 | 77.8 | Plus |
Dana\GF10386-PA | 154 | GF10386-PA | 1..118 | 1..117 | 500 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13532-PA | 425 | GG13532-PA | 186..425 | 141..378 | 1216 | 97.1 | Plus |
Dere\GG13531-PA | 165 | GG13531-PA | 1..124 | 1..124 | 603 | 90.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10048-PA | 253 | GH10048-PA | 7..253 | 139..378 | 749 | 70.1 | Plus |
Dgri\GH23316-PA | 431 | GH23316-PA | 187..431 | 141..378 | 748 | 70.2 | Plus |
Dgri\GH23315-PA | 183 | GH23315-PA | 1..126 | 1..125 | 285 | 54.6 | Plus |
Dgri\GH14478-PA | 148 | GH14478-PA | 1..126 | 1..125 | 284 | 54.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
comm3-PC | 378 | CG42334-PC | 1..378 | 1..378 | 1942 | 100 | Plus |
comm3-PE | 423 | CG42334-PE | 186..423 | 141..378 | 1213 | 100 | Plus |
comm3-PD | 423 | CG42334-PD | 186..423 | 141..378 | 1213 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13626-PA | 435 | GI13626-PA | 198..435 | 141..378 | 711 | 69.4 | Plus |
Dmoj\GI13625-PA | 206 | GI13625-PA | 1..139 | 1..135 | 307 | 47.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25496-PA | 161 | GL25496-PA | 1..105 | 1..115 | 373 | 66.1 | Plus |
Dper\GL25499-PA | 68 | GL25499-PA | 1..68 | 306..378 | 201 | 63 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17371-PA | 422 | GA17371-PA | 184..422 | 141..378 | 910 | 78.8 | Plus |
Dpse\GA12295-PA | 156 | GA12295-PA | 1..105 | 1..115 | 374 | 66.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24476-PA | 423 | GM24476-PA | 186..423 | 141..378 | 1232 | 98.7 | Plus |
Dsec\GM24475-PA | 150 | GM24475-PA | 1..127 | 1..127 | 650 | 94.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12549-PA | 241 | GD12549-PA | 3..241 | 140..378 | 1230 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13964-PA | 439 | GJ13964-PA | 151..439 | 66..378 | 762 | 56.2 | Plus |
Dvir\GJ13963-PA | 144 | GJ13963-PA | 1..136 | 1..129 | 332 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20752-PA | 455 | GK20752-PA | 203..455 | 141..378 | 851 | 74.5 | Plus |
Dwil\GK20741-PA | 190 | GK20741-PA | 1..151 | 1..138 | 381 | 56.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE19827-PA | 423 | GE19827-PA | 186..423 | 141..378 | 1213 | 97.1 | Plus |
Dyak\GE19826-PA | 157 | GE19826-PA | 1..124 | 1..124 | 615 | 91.1 | Plus |
Dyak\GE22835-PA | 157 | GE22835-PA | 1..124 | 1..124 | 604 | 90.3 | Plus |
Translation from 120 to 1256
> IP04049.hyp MANYTVVRVTKVQPYLHVVDSGYAALAHVDSFYAPTLEAGLLDFHANGTA THANLTAERVLVLIGEENYSYRSTSTIVLMVSAWILLILGFVFCCCAECC GVSVWRGKKTRSSIDIDGLNQAEQGGNGNGSASARDATADRANHSDPTIE ICRRCPPDYEAESLPSYTIVSGLPTYDDALEEFRKAGIILTPAMVPIIKI FECNETGKEQAVGYSLVETNIASADAAADNVSLASTTCNCGNSSPTSSLP SYSAATAAVMAAAAAAPPQVIELSPEHLASLSQKRLSLQISFNNSVRRQS PLRNHLLRSRAVGNTAGVGPSEAAGPAIHGSGAHGVHGGGGATILPVLHR SSSTISLSNERQLLDQRLRHLHHRGSLY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
comm3-PC | 378 | CG42334-PC | 1..378 | 1..378 | 1942 | 100 | Plus |
comm3-PE | 423 | CG42334-PE | 186..423 | 141..378 | 1213 | 100 | Plus |
comm3-PD | 423 | CG42334-PD | 186..423 | 141..378 | 1213 | 100 | Plus |