BDGP Sequence Production Resources |
Search the DGRC for IP04093
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 40 |
Well: | 93 |
Vector: | pOT2 |
Associated Gene/Transcript | CG42561-RA |
Protein status: | IP04093.pep: gold |
Preliminary Size: | 513 |
Sequenced Size: | 720 |
720 bp assembled on 2011-03-18
GenBank Submission: BT126169.1
> IP04093.complete CTGAAGTGTTTCTCGCGAAGCAGATGTGTGATTTTTTTGTATCTTCATCG TAAAAATCAAAACTCGTTTGCTTGCTACTTAAATCAACCAGCCTTCGTTT TGGGCTCAAAACTGACCAAGCGTTCAGATATTCAGATAGTTTTTGTTCAA CCACAGACAGGTCATCATGTCTCGCGATTTTTTCGCGCTGTTGGCAATTT TCATCTTCACTGCGGTCAACGCGGCACCGCAAATTTCACCAACTATCGTT CCGCAAATCCGCACAAATGGCTTTCAACTTGAGCCCCTCAATCAAGAATA CTTTCTCAGAATCGAACATCCGGGTGGCACTATTCGCCAGGAATCCGTGA GCCAGAATGAAGCCGGACATCTGCAGGTTAAAGGTGTGATTAACCAGCCC TTCGAGGATCAGGATGCCAATCTTATTGTCACCTATGAGGCTGGTCCGAA TGGATATGTTGCCAAATACAGCTTCGGCAAGGGTCCTCCAACACCGCCTC CTGACACACCATTATTCCTCAGTCCCGGTGCTCTGAAAACTGCAGCGGGA TAGGATTTTGACTGAATATTTAGAAAACATTAAAACCACAACTTGCCGTA ATTTATATTAAACCAATTCTGTATTTATAAGTAACAATAAGTAAGTTTAT AATCACTCACTAGTTTATAGAAATCAATAAACTAGCTAGACTTTCTTAAC TATAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13572255..13572650 | 308..703 | 1980 | 100 | Plus |
chr2R | 21145070 | chr2R | 13571820..13572006 | 1..187 | 935 | 100 | Plus |
chr2R | 21145070 | chr2R | 13572075..13572197 | 187..309 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17685153..17685554 | 308..709 | 1995 | 99.8 | Plus |
2R | 25286936 | 2R | 17684718..17684904 | 1..187 | 935 | 100 | Plus |
2R | 25286936 | 2R | 17684973..17685095 | 187..309 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17686352..17686753 | 308..709 | 1995 | 99.7 | Plus |
2R | 25260384 | 2R | 17685917..17686103 | 1..187 | 935 | 100 | Plus |
2R | 25260384 | 2R | 17686172..17686294 | 187..309 | 615 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 6139..6259 | 565..685 | 144 | 65.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13572257..13572650 | 310..703 | 100 | Plus | |
chr2R | 13571820..13572006 | 1..187 | 100 | -> | Plus |
chr2R | 13572076..13572197 | 188..309 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42561-RA | 1..387 | 167..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42561-RA | 1..387 | 167..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42561-RA | 1..387 | 167..553 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42561-RA | 1..703 | 1..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42561-RA | 1..566 | 138..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG42561-RA | 1..566 | 138..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17684718..17684904 | 1..187 | 100 | -> | Plus |
2R | 17684974..17685095 | 188..309 | 100 | -> | Plus |
2R | 17685155..17685548 | 310..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17684718..17684904 | 1..187 | 100 | -> | Plus |
2R | 17684974..17685095 | 188..309 | 100 | -> | Plus |
2R | 17685155..17685548 | 310..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17684718..17684904 | 1..187 | 100 | -> | Plus |
2R | 17684974..17685095 | 188..309 | 100 | -> | Plus |
2R | 17685155..17685548 | 310..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13572479..13572600 | 188..309 | 100 | -> | Plus |
arm_2R | 13572223..13572409 | 1..187 | 100 | -> | Plus |
arm_2R | 13572660..13573053 | 310..703 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17686354..17686747 | 310..703 | 100 | Plus | |
2R | 17686173..17686294 | 188..309 | 100 | -> | Plus |
2R | 17685917..17686103 | 1..187 | 100 | -> | Plus |
Translation from 166 to 552
> IP04093.hyp MSRDFFALLAIFIFTAVNAAPQISPTIVPQIRTNGFQLEPLNQEYFLRIE HPGGTIRQESVSQNEAGHLQVKGVINQPFEDQDANLIVTYEAGPNGYVAK YSFGKGPPTPPPDTPLFLSPGALKTAAG*
Translation from 166 to 552
> IP04093.pep MSRDFFALLAIFIFTAVNAAPQISPTIVPQIRTNGFQLEPLNQEYFLRIE HPGGTIRQESVSQNEAGHLQVKGVINQPFEDQDANLIVTYEAGPNGYVAK YSFGKGPPTPPPDTPLFLSPGALKTAAG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11661-PA | 84 | GF11661-PA | 4..84 | 48..128 | 270 | 75.3 | Plus |
Dana\GF11662-PA | 124 | GF11662-PA | 8..124 | 7..128 | 184 | 41.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21809-PA | 167 | GG21809-PA | 8..54 | 59..105 | 229 | 93.6 | Plus |
Dere\GG21809-PA | 167 | GG21809-PA | 72..167 | 28..128 | 174 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20762-PA | 123 | GH20762-PA | 20..123 | 26..128 | 220 | 48.6 | Plus |
Dgri\GH20763-PA | 123 | GH20763-PA | 20..123 | 26..128 | 192 | 47.2 | Plus |
Dgri\GH14922-PA | 128 | GH14922-PA | 56..128 | 54..128 | 154 | 49.3 | Plus |
Dgri\GH20761-PA | 124 | GH20761-PA | 2..124 | 5..128 | 142 | 37.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG42561-PA | 128 | CG42561-PA | 1..128 | 1..128 | 669 | 100 | Plus |
CG42562-PA | 126 | CG42562-PA | 8..126 | 7..128 | 182 | 43.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11436-PA | 120 | GI11436-PA | 1..120 | 1..128 | 210 | 44.2 | Plus |
Dmoj\GI16969-PA | 91 | GI16969-PA | 11..91 | 49..128 | 186 | 50.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16790-PA | 125 | GL16790-PA | 1..125 | 1..128 | 355 | 60.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24294-PA | 125 | GA24294-PA | 1..125 | 1..128 | 355 | 60.2 | Plus |
Dpse\GA24295-PA | 125 | GA24295-PA | 6..125 | 5..128 | 249 | 47.2 | Plus |
Dpse\GA27416-PA | 111 | GA27416-PA | 2..111 | 20..128 | 156 | 33.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21811-PA | 221 | GM21811-PA | 1..120 | 1..120 | 546 | 95.8 | Plus |
Dsec\GM21811-PA | 221 | GM21811-PA | 125..221 | 28..128 | 145 | 44.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11302-PA | 170 | GD11302-PA | 8..69 | 59..120 | 322 | 98.4 | Plus |
Dsim\GD11302-PA | 170 | GD11302-PA | 74..170 | 28..128 | 141 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20580-PA | 90 | GJ20580-PA | 10..90 | 49..128 | 193 | 51.9 | Plus |
Dvir\GJ13632-PA | 81 | GJ13632-PA | 10..81 | 54..128 | 160 | 48 | Plus |