IP04201.complete Sequence
668 bp (668 high quality bases) assembled on 2005-03-01
GenBank Submission: BT022977
> IP04201.complete
CGGTTTTGTACGATCGCTTTGGTGCTGCTCTGTGTGCTCCACGTCTCAAA
TCAGAAGCCATTTTTACCTGTTTTAAACAACATCCACAAACACTTCGAGG
ATAAGGTCATAATGATAAACGAAATGTTCAATGGTAACAACGATGATAGC
TCTGCACCGGAACCGGAACCGGAACCATCACACGCGAAACCCAATACATA
TTCAAATAAGAAGGCAAACACTAAAGAGGACGAAAAGAGGCAATTCCTGA
ACACGCTGGTCAAGCTTTGTAAATCAGAAACAGAAAAGGGATTTGTAAAT
CCCAAACAAACCATCAGTAATATTAACACGATCACGAACAACATCAGCAT
GCCGGAAATTCAATTGCCACCGATTACGGTTGTCATCGTGAAGGATGAAA
AGGAGCTGGCCAAATACCAAGAGAAATCTAAAAACGGGGCCATAATAATC
AAACGTCGTAGCAACGCCAAGGAGGATACCAAACCTGCACCCAGAACGGG
GTTGCAAGAAAGGACTAAGAAAGGATTGAGTGCGGGCATTAAGAAGTGCG
TCCTTATGAAAATCAAAGAACTTAATGTTATAAAAGCGTAACCGAACTAA
CTTTCTAAATTAAATTAAACATTCAATTTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
IP04201.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:54:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11112-RC | 708 | CG11112-RC | 48..680 | 1..633 | 3165 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:51:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 3288261..3288868 | 22..629 | 3010 | 99.7 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:41:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:51:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7400875..7401486 | 22..633 | 3060 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:43:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 7402074..7402685 | 22..633 | 3060 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 19:51:25 has no hits.
IP04201.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:52:35 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 3288176..3288197 | 1..22 | 100 | -> | Plus |
chr2R | 3288262..3288868 | 23..629 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:23:15 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 4..594 | 1..591 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:26:40 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 4..594 | 1..591 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:59:27 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 4..594 | 1..591 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:10:45 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 4..594 | 1..591 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:25:29 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 4..594 | 1..591 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:29:37 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 4..632 | 1..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:26:40 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 4..632 | 1..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:59:27 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 48..676 | 1..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:10:45 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 4..632 | 1..629 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:25:29 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11112-RC | 48..676 | 1..629 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:52:35 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7400790..7400811 | 1..22 | 100 | -> | Plus |
2R | 7400876..7401482 | 23..629 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:52:35 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7400790..7400811 | 1..22 | 100 | -> | Plus |
2R | 7400876..7401482 | 23..629 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:52:35 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7400790..7400811 | 1..22 | 100 | -> | Plus |
2R | 7400876..7401482 | 23..629 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:59:27 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3288295..3288316 | 1..22 | 100 | -> | Plus |
arm_2R | 3288381..3288987 | 23..629 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:47:14 Download gff for
IP04201.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7402075..7402681 | 23..629 | 100 | | Plus |
2R | 7401989..7402010 | 1..22 | 100 | -> | Plus |
IP04201.hyp Sequence
Translation from 0 to 590
> IP04201.hyp
RFCTIALVLLCVLHVSNQKPFLPVLNNIHKHFEDKVIMINEMFNGNNDDS
SAPEPEPEPSHAKPNTYSNKKANTKEDEKRQFLNTLVKLCKSETEKGFVN
PKQTISNINTITNNISMPEIQLPPITVVIVKDEKELAKYQEKSKNGAIII
KRRSNAKEDTKPAPRTGLQERTKKGLSAGIKKCVLMKIKELNVIKA*
IP04201.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:24:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11112-PC | 197 | CG11112-PC | 2..197 | 1..196 | 1010 | 100 | Plus |
IP04201.pep Sequence
Translation from 111 to 590
> IP04201.pep
MINEMFNGNNDDSSAPEPEPEPSHAKPNTYSNKKANTKEDEKRQFLNTLV
KLCKSETEKGFVNPKQTISNINTITNNISMPEIQLPPITVVIVKDEKELA
KYQEKSKNGAIIIKRRSNAKEDTKPAPRTGLQERTKKGLSAGIKKCVLMK
IKELNVIKA*
IP04201.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:20:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG23276-PA | 395 | GG23276-PA | 1..138 | 5..140 | 337 | 56.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11112-PC | 197 | CG11112-PC | 39..197 | 1..159 | 813 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:20:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20948-PA | 161 | GM20948-PA | 1..161 | 5..159 | 520 | 76.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:20:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD10472-PA | 171 | GD10472-PA | 1..171 | 1..159 | 529 | 74.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:20:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE19123-PA | 391 | GE19123-PA | 10..128 | 26..139 | 305 | 59.5 | Plus |