IP04259.complete Sequence
608 bp (608 high quality bases) assembled on 2004-12-17
GenBank Submission: BT023682
> IP04259.complete
CCATGTGCTGCTGCTGGCTATAAAAGCCGCATGGACATTGGGACTATCAG
CAAAATTGCTCTACATATCCCAAGATGCAGTTGTTGGCTGCGATTCTAGT
GCTAATCCTGGCCAGCTTGGCCCACGGTAGACCCACTTTCGATAAGATTG
CGGAGCTTCTGTTCGGCGACCCAAATCATTATCCGCCAGCAAGGCCAGTT
GATCCACAGCTACATCCTGGACCAGGTCCACTCATCCAGGAGGGCTACGA
GCAGGGCTACGACTATCACTATGGTGGAGGCTACGGCTACGGTGGTAGCC
ACCAGCAGACGCATCCAGGTGGCTATGCCTATTACCCACCACGACCGGTT
CCGGCAGCAAATGACTACTATCCACCACCTTGGTCAGTGCGTCCTTCGCC
TGGATACTACTCTCAGCCGTCTCATCCTGCCAGTGTCCATTATCCGCACA
AGAATCAGGATCTTTACGGAGGTGGAGGTGGTTACAAGCAGCGGGGTTAC
TAACGTTCATCCGTCAGATACCCCAGTCTCATCCAATCATGTGCTGTCTC
ATTTGTTTATGTGTAATTTATTAAAATTTCGTTTATTTCCAAAAAAAAAA
AAAAAAAA
IP04259.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:32:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-RA | 687 | CG13641-RA | 1..592 | 1..592 | 2960 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:04:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 20687377..20687966 | 590..1 | 2950 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:41:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:04:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 24864189..24864780 | 592..1 | 2960 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:22:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 24605020..24605611 | 592..1 | 2960 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 20:04:42 has no hits.
IP04259.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:05:32 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 20687377..20687966 | 1..590 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:23:29 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..429 | 75..503 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:55:32 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..429 | 75..503 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:02:23 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..429 | 75..503 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:36:12 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..429 | 75..503 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:28:00 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..429 | 75..503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:31:57 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..590 | 1..590 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:55:32 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..590 | 1..590 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:02:23 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..542 | 49..590 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:36:12 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..590 | 1..590 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:28:00 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13641-RA | 1..542 | 49..590 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:05:32 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24864191..24864780 | 1..590 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:05:32 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24864191..24864780 | 1..590 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:05:32 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24864191..24864780 | 1..590 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:02:23 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 20689913..20690502 | 1..590 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:14:48 Download gff for
IP04259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 24605022..24605611 | 1..590 | 100 | | Minus |
IP04259.pep Sequence
Translation from 74 to 502
> IP04259.pep
MQLLAAILVLILASLAHGRPTFDKIAELLFGDPNHYPPARPVDPQLHPGP
GPLIQEGYEQGYDYHYGGGYGYGGSHQQTHPGGYAYYPPRPVPAANDYYP
PPWSVRPSPGYYSQPSHPASVHYPHKNQDLYGGGGGYKQRGY*
IP04259.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 14:21:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12308-PA | 139 | GG12308-PA | 14..139 | 14..142 | 166 | 73.3 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-PA | 142 | CG13641-PA | 1..142 | 1..142 | 818 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 14:21:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM23450-PA | 138 | GM23450-PA | 1..138 | 1..142 | 383 | 76.8 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 14:21:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK22755-PA | 134 | GK22755-PA | 9..110 | 19..132 | 141 | 47.9 | Plus |
IP04259.hyp Sequence
Translation from 74 to 502
> IP04259.hyp
MQLLAAILVLILASLAHGRPTFDKIAELLFGDPNHYPPARPVDPQLHPGP
GPLIQEGYEQGYDYHYGGGYGYGGSHQQTHPGGYAYYPPRPVPAANDYYP
PPWSVRPSPGYYSQPSHPASVHYPHKNQDLYGGGGGYKQRGY*
IP04259.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:25:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13641-PA | 142 | CG13641-PA | 1..142 | 1..142 | 818 | 100 | Plus |