Clone IP04277 Report

Search the DGRC for IP04277

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:42
Well:77
Vector:pOT2
Associated Gene/TranscriptCG14071-RA
Protein status:IP04277.pep: gold
Preliminary Size:411
Sequenced Size:665

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14071 2005-01-01 Successful iPCR screen
CG14071 2008-04-29 Release 5.5 accounting
CG14071 2008-08-15 Release 5.9 accounting
CG14071 2008-12-18 5.12 accounting

Clone Sequence Records

IP04277.complete Sequence

665 bp (665 high quality bases) assembled on 2005-03-01

GenBank Submission: BT022944

> IP04277.complete
ATCATAAGTAGGTAGCTAGAAACTGTTCGGATTTAAGGAACAAATTTATT
GCTAAGTTAAATCAAATACTGCTCCACGTAGAAAACCACAAACTCCTTTC
AACGGCGTAACTACACTGTGCAGCAATGTCCAGATCGGCAAAGGGCTTTG
GTCGTTTAATCAATCCGGGCGTGGTACTCCATCCGGAACTGCATCAAAAG
ATGGCCGACTTTGAGGCCATGACCATCGAGCGATCTGATTTGGATCACGA
ATTGAGCCGATTGCGCAAGCAGCAGGACGATACCGAGGATAATTTGGCAG
AGGCGCTGGCCGAGGACGAGTTCCAGTGCAATTTGAGTGGCCAGCCATTC
GTTGCTCCCAACGAGGACGAGCTGCAGGAAATTCTGAGGAATCACCTCGG
TAGCATTATCAACAAGCTGGCTGCCACGTACGAGCGCCTTATTTACCTGG
ATGCGGACATCAGGAAGCTGAAGGGAGTCATTGAAAAGGCCATCACAGTG
GCTAATGAGGAATCGGCAGCAGCCGCCTCAATGTGAAGATATGTATTTAA
CCATTACATACGTTGTACTTCTACATATGTGTATCTTGAAAATTTCAGTT
CGATTTAATGTGCAAGTAAAGTTTGCAAGTATGTTAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA

IP04277.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG14071-RA 638 CG14071-RA 1..638 1..638 3190 100 Plus
nc_2501.a 1201 nc_2501.a 1..628 1..628 3140 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:48:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 10887039..10887673 635..1 3175 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:41:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10888266..10888903 638..1 3190 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:42:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 10888266..10888903 638..1 3190 100 Minus
Blast to na_te.dros performed on 2019-03-16 03:48:11 has no hits.

IP04277.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:48:52 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 10887039..10887673 1..635 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:23:35 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RA 1..411 126..536 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:26:28 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RB 1..411 126..536 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:04:13 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RA 1..411 126..536 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:10:31 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RA 1..411 126..536 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:15:31 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RA 1..411 126..536 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:29:20 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RA 1..635 1..635 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:26:28 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RA 1..635 1..635 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:04:13 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RA 25..659 1..635 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:10:31 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RA 1..635 1..635 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:15:31 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
CG14071-RA 25..659 1..635 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:52 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10888269..10888903 1..635 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:52 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10888269..10888903 1..635 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:52 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10888269..10888903 1..635 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:04:13 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 10888269..10888903 1..635 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:47:01 Download gff for IP04277.complete
Subject Subject Range Query Range Percent Splice Strand
2L 10888269..10888903 1..635 100   Minus

IP04277.hyp Sequence

Translation from 125 to 535

> IP04277.hyp
MSRSAKGFGRLINPGVVLHPELHQKMADFEAMTIERSDLDHELSRLRKQQ
DDTEDNLAEALAEDEFQCNLSGQPFVAPNEDELQEILRNHLGSIINKLAA
TYERLIYLDADIRKLKGVIEKAITVANEESAAAASM*

IP04277.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG14071-PC 136 CG14071-PC 1..136 1..136 681 100 Plus
CG14071-PB 136 CG14071-PB 1..136 1..136 681 100 Plus
CG14071-PA 136 CG14071-PA 1..136 1..136 681 100 Plus

IP04277.pep Sequence

Translation from 125 to 535

> IP04277.pep
MSRSAKGFGRLINPGVVLHPELHQKMADFEAMTIERSDLDHELSRLRKQQ
DDTEDNLAEALAEDEFQCNLSGQPFVAPNEDELQEILRNHLGSIINKLAA
TYERLIYLDADIRKLKGVIEKAITVANEESAAAASM*

IP04277.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14054-PA 137 GF14054-PA 1..123 1..123 467 71.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10345-PA 136 GG10345-PA 1..125 1..125 564 84.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10092-PA 139 GH10092-PA 8..127 8..127 268 45.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:53:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG14071-PC 136 CG14071-PC 1..136 1..136 681 100 Plus
CG14071-PB 136 CG14071-PB 1..136 1..136 681 100 Plus
CG14071-PA 136 CG14071-PA 1..136 1..136 681 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14328-PA 138 GI14328-PA 1..127 1..127 325 52 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19027-PA 136 GL19027-PA 1..136 1..136 398 58.1 Plus
Dper\GL22937-PA 136 GL22937-PA 1..136 1..136 352 52.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 17:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12743-PA 136 GA12743-PA 1..136 1..136 395 56.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:18:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11314-PA 136 GM11314-PA 1..125 1..125 628 95.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:18:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22214-PA 136 GD22214-PA 1..136 1..136 685 96.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 17:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16248-PA 138 GJ16248-PA 1..129 1..129 325 50.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 17:18:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18370-PA 139 GK18370-PA 1..129 1..129 387 58.9 Plus
Dwil\GK24897-PA 138 GK24897-PA 1..128 1..129 371 58.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:18:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13197-PA 136 GE13197-PA 1..125 1..125 532 81.6 Plus