IP04719.complete Sequence
868 bp (849 high quality bases) assembled on 2008-12-09
GenBank Submission: BT023661.2
> IP04719.complete
AGCCCCACAACTATTGTGATTTTTTTTTTTTTTTTAAGACAACACATTCC
CCATCTCGTTGCAATAGAATGCCAAATTCGTCAGTAATCAGCAGGGTGAA
CGCGGGATTGGCTCGCTGTTTGAGCCACCATCGGCGATTGTGTCGCGGCA
TTGCCGAGCTGGACCGGCTCATCCACAACGATGAGTTCTTGAAGGATCCC
AGGACGCAGTGGCTGCTCCATCAGCGGCGTCAAACCGAGGAGGAGCAGGC
AAATGCAGATGCTAGGATCAGTCCGTTGGGCAGAATGGGTTGTGAAATGG
GTCGTCTGCTGGGTAGGTCCAAGATAAATCTGTCCCCGCAATCCCGAAAG
AACAATCTCGTCGTGACCCGGACCTTTTGCCAAATCCTCCAAGTTGAAAA
CTCCACACCCAGAAAGCAGTCGGGACCAATGCCTGCTCCAACTCCACTGC
CATCGCCAGAAAGAAGGCAGAGTCTCATCTTCAGCGCTAGCCTGTCTCGT
CCTGAGCCGTAAGGATCCTGCTCCAAGATCAGTCAAAGTAGTTAGGCATG
ATATCCTGTAGAGATACACTACCAAGCCTGGCAGAGATCTACGATATGTA
TAGATAGATCAGTGCAAGGCTTGGTAGGGTTCTCTTTGAGATGTCTCTGT
GGAAATAGCCCAGAAACGACTGAATTTATATCCCACACAACTGAAGGGGC
AGCAGGAGGATGTGGACTACCAGGAGGAAGAGGAGGAGGTGTTGCCCCGT
CCGTCGTTCAGTATCCGTGCTGCTCTCGTTATTGTTATGAATAAGTTAAT
AACATGGCGGAAGGCTTCTTTTGTCGTGGCCCAAACAAGCAAAAAAAAAA
AAAAAAAAAAAAAAAAAA
IP04719.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:14:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15059.b | 1263 | CG15059.b | 310..1152 | 1..842 | 4175 | 99.8 | Plus |
CG15059.a | 1029 | CG15059.a | 76..918 | 1..842 | 4175 | 99.8 | Plus |
CG15059-RB | 696 | CG15059-RB | 76..696 | 1..620 | 3065 | 99.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:05:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 18147748..18148239 | 840..349 | 2460 | 100 | Minus |
chrX | 22417052 | chrX | 18148296..18148646 | 350..1 | 1660 | 98.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:43:36 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:05:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18258612..18259105 | 842..349 | 2470 | 100 | Minus |
X | 23542271 | X | 18259167..18259517 | 350..1 | 1705 | 99.7 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:32:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 18266710..18267203 | 842..349 | 2470 | 100 | Minus |
X | 23527363 | X | 18267265..18267615 | 350..1 | 1715 | 99.7 | Minus |
Blast to na_te.dros performed on 2019-03-16 10:05:39 has no hits.
IP04719.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:06:34 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 18147748..18148237 | 351..840 | 100 | <- | Minus |
chrX | 18148296..18148646 | 1..350 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:03:45 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15059-RB | 1..444 | 69..512 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:21:35 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15059-RB | 1..444 | 69..512 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:11:54 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15059-RB | 1..444 | 69..512 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed on 2008-07-21 17:00:11 has no hits.
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:55:02 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15059-RB | 1..444 | 69..512 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-12-09 11:32:38 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15059-RB | 1..560 | 61..620 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:21:35 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15059-RB | 1..560 | 61..620 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:11:54 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15059-RB | 1..560 | 61..620 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:00:11 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15059-RB | 1..560 | 249..808 | 100 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:55:02 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15059-RB | 1..841 | 1..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:06:34 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18258614..18259103 | 351..840 | 100 | <- | Minus |
X | 18259167..18259517 | 1..350 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:06:34 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18258614..18259103 | 351..840 | 100 | <- | Minus |
X | 18259167..18259517 | 1..350 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:06:34 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18258614..18259103 | 351..840 | 100 | <- | Minus |
X | 18259167..18259517 | 1..350 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:11:54 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18152647..18153136 | 351..840 | 100 | <- | Minus |
arm_X | 18153200..18153550 | 1..350 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:53:13 Download gff for
IP04719.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18266712..18267201 | 351..840 | 100 | <- | Minus |
X | 18267265..18267615 | 1..350 | 99 | | Minus |
IP04719.hyp Sequence
Translation from 0 to 511
> IP04719.hyp
SPTTIVIFFFFFKTTHSPSRCNRMPNSSVISRVNAGLARCLSHHRRLCRG
IAELDRLIHNDEFLKDPRTQWLLHQRRQTEEEQANADARISPLGRMGCEM
GRLLGRSKINLSPQSRKNNLVVTRTFCQILQVENSTPRKQSGPMPAPTPL
PSPERRQSLIFSASLSRPEP*
IP04719.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:30:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15059-PC | 147 | CG15059-PC | 1..147 | 24..170 | 765 | 100 | Plus |
CG15059-PB | 147 | CG15059-PB | 1..147 | 24..170 | 765 | 100 | Plus |
IP04719.pep Sequence
Translation from 2 to 511
> IP04719.pep
PHNYCDFFFFFKTTHSPSRCNRMPNSSVISRVNAGLARCLSHHRRLCRGI
AELDRLIHNDEFLKDPRTQWLLHQRRQTEEEQANADARISPLGRMGCEMG
RLLGRSKINLSPQSRKNNLVVTRTFCQILQVENSTPRKQSGPMPAPTPLP
SPERRQSLIFSASLSRPEP*
IP04719.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:09:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF22518-PA | 172 | GF22518-PA | 1..142 | 23..154 | 257 | 47.9 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:09:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18136-PA | 155 | GG18136-PA | 1..141 | 23..161 | 618 | 84.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG15059-PC | 147 | CG15059-PC | 1..147 | 23..169 | 765 | 100 | Plus |
CG15059-PB | 147 | CG15059-PB | 1..147 | 23..169 | 765 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:09:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM22828-PA | 145 | GM22828-PA | 1..145 | 23..167 | 733 | 95.9 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:09:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24478-PA | 145 | GD24478-PA | 1..145 | 23..167 | 718 | 93.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:09:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15546-PA | 159 | GE15546-PA | 1..146 | 23..168 | 670 | 87.7 | Plus |