![]() | BDGP Sequence Production Resources |
Search the DGRC for IP04848
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 48 |
Well: | 48 |
Vector: | pOT2 |
Associated Gene/Transcript | LSm1-RA |
Protein status: | IP04848.pep: gold |
Preliminary Size: | 415 |
Sequenced Size: | 558 |
Gene | Date | Evidence |
---|---|---|
CG4279 | 2005-01-01 | Successful iPCR screen |
CG4279 | 2008-04-29 | Release 5.5 accounting |
CG4279 | 2008-08-15 | Release 5.9 accounting |
CG4279 | 2008-12-18 | 5.12 accounting |
558 bp (558 high quality bases) assembled on 2005-03-06
GenBank Submission: BT022249
> IP04848.complete TTTATCTAAATCCCACATATTTTCATAGCATGGACGACTTAAATCCGCTG GCGGGCACTGCTCACCTCCTGGAAGAGGTTGACAAGAAACTGATGGTACT TTTGAGAGACGGACGGACTCTGATTGGATACCTGCGGTCCGTGGACCAGT TCGCCAACCTGGTGCTGCAACGCACCATCGAGCGGATACATGTGGGCAAC GAATACGGCGACATTCCTCGCGGAGTCTTCATCATTCGCGGGGAGAATGT GGTGCTACTGGGCGAAATAGACCGTGAAAAGGAGCAGAAACTGCCACTCA AAGAGATATCCGTCGATGAAATCCTGGACGCCCAGCGTAGGGAACAGGAG CAGCGGCAGGAGAAACACCGCCTAGTATCCAAGGCACTAAAGGAACGAGG CCTGGCCGTAGATGCCAACATAATCAACGAGGACTTCTGCTAAGACTCCA TTTTTTCCTAAGCACAAAGTTAGATTAAGCTCAAAAGATTTTCGTCTCTT TGTATATTTGTACTGCATTAAAAAACTATGTTAAAACCTAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 17056428..17056697 | 539..270 | 1335 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 17056759..17056944 | 270..85 | 900 | 98.9 | Minus |
chr2R | 21145070 | chr2R | 17056999..17057082 | 84..1 | 405 | 98.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 21169968..21170238 | 540..270 | 1355 | 100 | Minus |
2R | 25286936 | 2R | 21170300..21170485 | 270..85 | 930 | 100 | Minus |
2R | 25286936 | 2R | 21170540..21170623 | 84..1 | 405 | 98.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 21171167..21171437 | 540..270 | 1355 | 100 | Minus |
2R | 25260384 | 2R | 21171499..21171684 | 270..85 | 930 | 100 | Minus |
2R | 25260384 | 2R | 21171739..21171822 | 84..1 | 405 | 98.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 17056428..17056697 | 270..539 | 99 | <- | Minus |
chr2R | 17056760..17056944 | 85..269 | 98 | <- | Minus |
chr2R | 17056999..17057082 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4279-RA | 1..414 | 30..443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LSm1-RA | 1..414 | 30..443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LSm1-RA | 1..414 | 30..443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4279-RA | 1..414 | 30..443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LSm1-RA | 1..414 | 30..443 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4279-RA | 23..561 | 1..539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LSm1-RA | 23..561 | 1..539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LSm1-RA | 50..588 | 1..539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4279-RA | 23..561 | 1..539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LSm1-RA | 50..588 | 1..539 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21169969..21170238 | 270..539 | 100 | <- | Minus |
2R | 21170301..21170485 | 85..269 | 100 | <- | Minus |
2R | 21170540..21170623 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21169969..21170238 | 270..539 | 100 | <- | Minus |
2R | 21170301..21170485 | 85..269 | 100 | <- | Minus |
2R | 21170540..21170623 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21169969..21170238 | 270..539 | 100 | <- | Minus |
2R | 21170301..21170485 | 85..269 | 100 | <- | Minus |
2R | 21170540..21170623 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 17057474..17057743 | 270..539 | 100 | <- | Minus |
arm_2R | 17057806..17057990 | 85..269 | 100 | <- | Minus |
arm_2R | 17058045..17058128 | 1..84 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 21171168..21171437 | 270..539 | 100 | <- | Minus |
2R | 21171500..21171684 | 85..269 | 100 | <- | Minus |
2R | 21171739..21171822 | 1..84 | 98 | Minus |
Translation from 2 to 442
> IP04848.hyp YLNPTYFHSMDDLNPLAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQF ANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEIDREKEQKLPLK EISVDEILDAQRREQEQRQEKHRLVSKALKERGLAVDANIINEDFC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
LSm1-PA | 137 | CG4279-PA | 1..137 | 10..146 | 686 | 100 | Plus |
Translation from 29 to 442
> IP04848.pep MDDLNPLAGTAHLLEEVDKKLMVLLRDGRTLIGYLRSVDQFANLVLQRTI ERIHVGNEYGDIPRGVFIIRGENVVLLGEIDREKEQKLPLKEISVDEILD AQRREQEQRQEKHRLVSKALKERGLAVDANIINEDFC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12971-PA | 137 | GF12971-PA | 1..137 | 1..137 | 686 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20797-PA | 137 | GG20797-PA | 1..137 | 1..137 | 694 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21171-PA | 137 | GH21171-PA | 1..137 | 1..137 | 681 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
LSm1-PA | 137 | CG4279-PA | 1..137 | 1..137 | 686 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18766-PA | 137 | GI18766-PA | 1..137 | 1..137 | 686 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10169-PA | 137 | GL10169-PA | 1..137 | 1..137 | 679 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18077-PA | 137 | GA18077-PA | 1..137 | 1..137 | 679 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15742-PA | 137 | GM15742-PA | 1..137 | 1..137 | 696 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25220-PA | 137 | GD25220-PA | 1..137 | 1..137 | 696 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21790-PA | 137 | GJ21790-PA | 1..137 | 1..137 | 680 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19486-PA | 137 | GK19486-PA | 1..137 | 1..137 | 678 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13737-PA | 137 | GE13737-PA | 1..137 | 1..137 | 696 | 100 | Plus |