BDGP Sequence Production Resources |
Search the DGRC for IP04909
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 49 |
Well: | 9 |
Vector: | pOT2 |
Associated Gene/Transcript | rn-RD |
Protein status: | IP04909.pep: wuzgold |
Preliminary Size: | 456 |
Sequenced Size: | 1198 |
Gene | Date | Evidence |
---|---|---|
CG32467 | 2005-01-01 | Successful iPCR screen |
rn | 2008-04-29 | Release 5.5 accounting |
rn | 2008-08-15 | Release 5.9 accounting |
rn | 2008-12-18 | 5.12 accounting |
1198 bp (1198 high quality bases) assembled on 2006-01-26
GenBank Submission: BT024401
> IP04909.complete TCGAGCTGGAGGAGTAAAAAAAAGGGCTGCCTACATCTGGGCTCCACCGA AGTTGGTTGTCATGCACGAACTCATTGGCAAATACAGCCATTCGGACATG GACATGCTGAAGGATCAGCTGAAGCGTGGGGGCTACATGGGCGCCCTTGG TCCGCCCACGCCCGGCACATCCGCCCCCTCGCCCTTCCTGATGCCCGCCG AATTCTACAAAAGCCTGCTCGCCAGCGCCGTTCTGCAACAGCAACAGCAG CACAAGTTCTACGCCGGCACGCCCTCACCCAGTCCCGCCCCCAGTTTGTC ACCCACCTCAGGTCGCCACTTGCTGTTTTCCACGGCAGCTGCGGCAACCG CTTGTGCTCCGGAGAATGGTCACGTGAAGACGGAGCTCGAAGAGCAGGAC CAGCAGAACGGGATGCCGGAAACCGTCGGACATGAGGAGCAGAAACCCAT CATCGAAGAGAACCCAACGCCGAATAAGCCGCACAACAACAACGGTTACT CGTGGTCCACCGGCAACAACAACGAGGTTGTCAGTCATAGCAGCAACGGC CACACCAACAACCACCCAACAACACCACCCACTCCGCCCAACGAGGCCAG CGCCACCCAAGCGACTTCAGTGTCCGCAATTAATTTGAATCAAGCCCAAC CCGCATCACAGACGCGTTCAAACTTTGGCAGCTCCATAAAGTCACCACCA TCAGAACCGGACGCGGTCACTGCTGCCACGTGCAAAAGTCAGGAGAATAA CTCCGGCCAGAACCCCACCCCCAACTCCCTCTCCGATCACAACCCGGCTC ACAACCTTAACTCGAATTCAACGGCCGCTGCCGTGGCCGCCGCTGCCGCC GCCGCCGCCGCTGCCAACATGCCGATCGGCGGCGTCCAGGGTCAGAATCC CACCCAGGGCCTGGTCCACTGGATGAGTGCCGTGATGGCCGAGCACATGA CCGGCCAGACGCACCACGATCCTGGCGCCGTAGGCATGCACTACATGTGG AACGGGAACGTTGACGTGAGTATCAACTGGATAACTGGATTCACGGGGGC GGGCAAAATTCGTGGGGCTTGTTAATTTTAGCCACACTTTGAAAAATCCA AAGAGACAGCCTATACCGAATTATTACCACAGGACTTAACTTACTCCGTC TAAGTAAATTTGCCATGCTCTTTAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 3126578..3127275 | 476..1173 | 100 | <- | Minus |
chr3R | 3127858..3128332 | 1..475 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RD | 1..1014 | 62..1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RD | 1..1014 | 62..1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RF | 1..954 | 62..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RD | 1..1014 | 62..1075 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RF | 1..954 | 62..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RD | 1..1173 | 1..1173 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RD | 1..1173 | 1..1173 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RF | 1..1015 | 1..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RD | 1..1173 | 1..1173 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rn-RF | 1..1015 | 1..1015 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7300479..7301176 | 476..1173 | 100 | <- | Minus |
3R | 7301759..7302233 | 1..475 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7300479..7301176 | 476..1173 | 100 | <- | Minus |
3R | 7301759..7302233 | 1..475 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7300479..7301176 | 476..1173 | 100 | <- | Minus |
3R | 7301759..7302233 | 1..475 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 3126201..3126898 | 476..1173 | 100 | <- | Minus |
arm_3R | 3127481..3127955 | 1..475 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 7041310..7042007 | 476..1173 | 100 | <- | Minus |
3R | 7042590..7043064 | 1..475 | 100 | Minus |
Translation from 0 to 1074
> IP04909.hyp RAGGVKKRAAYIWAPPKLVVMHELIGKYSHSDMDMLKDQLKRGGYMGALG PPTPGTSAPSPFLMPAEFYKSLLASAVLQQQQQHKFYAGTPSPSPAPSLS PTSGRHLLFSTAAAATACAPENGHVKTELEEQDQQNGMPETVGHEEQKPI IEENPTPNKPHNNNGYSWSTGNNNEVVSHSSNGHTNNHPTTPPTPPNEAS ATQATSVSAINLNQAQPASQTRSNFGSSIKSPPSEPDAVTAATCKSQENN SGQNPTPNSLSDHNPAHNLNSNSTAAAVAAAAAAAAAANMPIGGVQGQNP TQGLVHWMSAVMAEHMTGQTHHDPGAVGMHYMWNGNVDVSINWITGFTGA GKIRGAC*
Translation from 1 to 1074
> IP04909.pep RAGGVKKRAAYIWAPPKLVVMHELIGKYSHSDMDMLKDQLKRGGYMGALG PPTPGTSAPSPFLMPAEFYKSLLASAVLQQQQQHKFYAGTPSPSPAPSLS PTSGRHLLFSTAAAATACAPENGHVKTELEEQDQQNGMPETVGHEEQKPI IEENPTPNKPHNNNGYSWSTGNNNEVVSHSSNGHTNNHPTTPPTPPNEAS ATQATSVSAINLNQAQPASQTRSNFGSSIKSPPSEPDAVTAATCKSQENN SGQNPTPNSLSDHNPAHNLNSNSTAAAVAAAAAAAAAANMPIGGVQGQNP TQGLVHWMSAVMAEHMTGQTHHDPGAVGMHYMWNGNVDVSINWITGFTGA GKIRGAC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17309-PA | 808 | GF17309-PA | 179..362 | 162..339 | 502 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG25249-PA | 941 | GG25249-PA | 151..338 | 156..338 | 719 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19279-PA | 543 | GH19279-PA | 218..355 | 199..338 | 326 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rn-PF | 927 | CG42277-PF | 1..318 | 21..338 | 1702 | 100 | Plus |
rn-PE | 946 | CG42277-PE | 48..337 | 44..338 | 975 | 66.7 | Plus |
rn-PG | 952 | CG42277-PG | 48..337 | 44..338 | 975 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23488-PA | 374 | GI23488-PA | 213..362 | 189..341 | 335 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12185-PA | 514 | GL12185-PA | 1..342 | 21..338 | 543 | 54.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26220-PD | 374 | GA26220-PD | 205..350 | 198..344 | 422 | 72.3 | Plus |
Dpse\GA26220-PC | 971 | GA26220-PC | 205..344 | 198..338 | 408 | 73.2 | Plus |
Dpse\GA26220-PA | 963 | GA26220-PA | 197..336 | 198..338 | 404 | 74.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10489-PA | 509 | GM10489-PA | 156..338 | 156..338 | 742 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19488-PA | 943 | GD19488-PA | 155..337 | 156..338 | 750 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10240-PA | 539 | GJ10240-PA | 171..369 | 142..338 | 342 | 54.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11084-PA | 530 | GK11084-PA | 133..315 | 151..338 | 363 | 58.4 | Plus |