Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
IP04912.complete Sequence
663 bp (663 high quality bases) assembled on 2005-01-11
GenBank Submission: BT023656
> IP04912.complete
AGAAGTCCGTCGCTCCTTTGAGTTAAGTATACCCAATCGAATCATGACTG
AGTACAGTTCTCAGAGCCAAACTGAAAGTGATAGCGATGAGGGACCGGAA
CCGGATGTGGAGCAGGCCAGAACCGGTGGTTCCTCGGATGATCTGACCAG
CAACGAGTGGCTGAGCTTGCACGGATTTCCATCCGGCACCGATGATGAAT
TGCTGGCCATTTTCTCACGCTTCTGTTCGATGAACGCGCATCGCAAAAGG
AAGAATGGTCTAGAGCTGAGATTCGCAACCGCGGAGCATCTGCAGCTGGG
CGTTCTAATGGCCAAGCGTCTGGTGGTGTGCAACGTGCAGATCCACTGGC
ATGTGGGTCGTATGGAGGATGATCCATCCCTTAATCCCAAGCCATCAAGG
GAGCGAAGTACGGCCGGTGGACTTGGCGTTTTTGGCAAGTTGCGAAGGGC
ATTCGCCAATTATTTTCACTAGCATTACCATTAATATTGTTCAAAGGAAT
TGTTGCTGTATAAGAAAAGCTTCTTAGTTATCTCAATGGCTATACAAATT
TTGAATTATTCCTTTTGATTCCAAACTAAGGAATTTGTAATATTTGCTTT
GGAGTAACAAAAGTTCATTTATAATACAAAACATTCATCATTAAAAAAAA
AAAAAAAAAAAAA
IP04912.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:38:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-RA | 429 | CG32639-RA | 1..429 | 44..472 | 2145 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:24:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 13126780..13127421 | 642..1 | 3105 | 98.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:44:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:24:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13235923..13236566 | 644..1 | 3220 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:28:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 13244021..13244664 | 644..1 | 3220 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 02:24:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 2750..2952 | 614..415 | 116 | 54.4 | Minus |
IP04912.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:25:12 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 13126780..13127421 | 1..642 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:25:42 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 44..472 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:04:12 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 44..472 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:16:42 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 44..472 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:49:21 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 44..472 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:08:42 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 44..472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:50:46 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 44..472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:04:12 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..642 | 1..642 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:16:42 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..642 | 1..642 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:49:21 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..429 | 44..472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:08:42 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32639-RA | 1..642 | 1..642 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:12 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13235925..13236566 | 1..642 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:12 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13235925..13236566 | 1..642 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:12 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13235925..13236566 | 1..642 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:16:42 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13129958..13130599 | 1..642 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:23:58 Download gff for
IP04912.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13244023..13244664 | 1..642 | 100 | | Minus |
IP04912.hyp Sequence
Translation from 0 to 471
> IP04912.hyp
EVRRSFELSIPNRIMTEYSSQSQTESDSDEGPEPDVEQARTGGSSDDLTS
NEWLSLHGFPSGTDDELLAIFSRFCSMNAHRKRKNGLELRFATAEHLQLG
VLMAKRLVVCNVQIHWHVGRMEDDPSLNPKPSRERSTAGGLGVFGKLRRA
FANYFH*
IP04912.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:32:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-PA | 142 | CG32639-PA | 1..142 | 15..156 | 751 | 100 | Plus |
IP04912.pep Sequence
Translation from 43 to 471
> IP04912.pep
MTEYSSQSQTESDSDEGPEPDVEQARTGGSSDDLTSNEWLSLHGFPSGTD
DELLAIFSRFCSMNAHRKRKNGLELRFATAEHLQLGVLMAKRLVVCNVQI
HWHVGRMEDDPSLNPKPSRERSTAGGLGVFGKLRRAFANYFH*
IP04912.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32639-PA | 142 | CG32639-PA | 1..142 | 1..142 | 751 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:28:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA17036-PA | 175 | GA17036-PA | 30..165 | 19..142 | 254 | 43.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:28:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD15894-PA | 144 | GD15894-PA | 1..144 | 1..142 | 677 | 88.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:28:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16167-PA | 158 | GE16167-PA | 1..157 | 1..141 | 540 | 69.4 | Plus |