Clone IP04912 Report

Search the DGRC for IP04912

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:49
Well:12
Vector:pOT2
Associated Gene/TranscriptCG32639-RA
Protein status:IP04912.pep: gold
Preliminary Size:429
Sequenced Size:663

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32639 2005-01-01 Successful iPCR screen
CG32639 2008-04-29 Release 5.5 accounting
CG32639 2008-08-15 Release 5.9 accounting
CG32639 2008-12-18 5.12 accounting

Clone Sequence Records

IP04912.complete Sequence

663 bp (663 high quality bases) assembled on 2005-01-11

GenBank Submission: BT023656

> IP04912.complete
AGAAGTCCGTCGCTCCTTTGAGTTAAGTATACCCAATCGAATCATGACTG
AGTACAGTTCTCAGAGCCAAACTGAAAGTGATAGCGATGAGGGACCGGAA
CCGGATGTGGAGCAGGCCAGAACCGGTGGTTCCTCGGATGATCTGACCAG
CAACGAGTGGCTGAGCTTGCACGGATTTCCATCCGGCACCGATGATGAAT
TGCTGGCCATTTTCTCACGCTTCTGTTCGATGAACGCGCATCGCAAAAGG
AAGAATGGTCTAGAGCTGAGATTCGCAACCGCGGAGCATCTGCAGCTGGG
CGTTCTAATGGCCAAGCGTCTGGTGGTGTGCAACGTGCAGATCCACTGGC
ATGTGGGTCGTATGGAGGATGATCCATCCCTTAATCCCAAGCCATCAAGG
GAGCGAAGTACGGCCGGTGGACTTGGCGTTTTTGGCAAGTTGCGAAGGGC
ATTCGCCAATTATTTTCACTAGCATTACCATTAATATTGTTCAAAGGAAT
TGTTGCTGTATAAGAAAAGCTTCTTAGTTATCTCAATGGCTATACAAATT
TTGAATTATTCCTTTTGATTCCAAACTAAGGAATTTGTAATATTTGCTTT
GGAGTAACAAAAGTTCATTTATAATACAAAACATTCATCATTAAAAAAAA
AAAAAAAAAAAAA

IP04912.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:38:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG32639-RA 429 CG32639-RA 1..429 44..472 2145 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:24:04
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 13126780..13127421 642..1 3105 98.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:44:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:24:02
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13235923..13236566 644..1 3220 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:28:38
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 13244021..13244664 644..1 3220 100 Minus
Blast to na_te.dros performed 2019-03-16 02:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy11 4428 gypsy11 GYPSY11 4428bp 2750..2952 614..415 116 54.4 Minus

IP04912.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:25:12 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 13126780..13127421 1..642 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:25:42 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..429 44..472 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:04:12 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..429 44..472 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:16:42 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..429 44..472 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:49:21 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..429 44..472 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:08:42 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..429 44..472 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:50:46 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..429 44..472 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:04:12 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..642 1..642 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:16:42 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..642 1..642 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:49:21 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..429 44..472 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:08:42 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
CG32639-RA 1..642 1..642 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:12 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
X 13235925..13236566 1..642 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:12 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
X 13235925..13236566 1..642 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:12 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
X 13235925..13236566 1..642 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:16:42 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 13129958..13130599 1..642 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:23:58 Download gff for IP04912.complete
Subject Subject Range Query Range Percent Splice Strand
X 13244023..13244664 1..642 100   Minus

IP04912.hyp Sequence

Translation from 0 to 471

> IP04912.hyp
EVRRSFELSIPNRIMTEYSSQSQTESDSDEGPEPDVEQARTGGSSDDLTS
NEWLSLHGFPSGTDDELLAIFSRFCSMNAHRKRKNGLELRFATAEHLQLG
VLMAKRLVVCNVQIHWHVGRMEDDPSLNPKPSRERSTAGGLGVFGKLRRA
FANYFH*

IP04912.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG32639-PA 142 CG32639-PA 1..142 15..156 751 100 Plus

IP04912.pep Sequence

Translation from 43 to 471

> IP04912.pep
MTEYSSQSQTESDSDEGPEPDVEQARTGGSSDDLTSNEWLSLHGFPSGTD
DELLAIFSRFCSMNAHRKRKNGLELRFATAEHLQLGVLMAKRLVVCNVQI
HWHVGRMEDDPSLNPKPSRERSTAGGLGVFGKLRRAFANYFH*

IP04912.pep Blast Records

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG32639-PA 142 CG32639-PA 1..142 1..142 751 100 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:28:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17036-PA 175 GA17036-PA 30..165 19..142 254 43.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:28:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15894-PA 144 GD15894-PA 1..144 1..142 677 88.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:28:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16167-PA 158 GE16167-PA 1..157 1..141 540 69.4 Plus