Clone IP05065 Report

Search the DGRC for IP05065

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:50
Well:65
Vector:pOT2
Associated Gene/TranscriptCpr47Ea-RA
Protein status:IP05065.pep: gold
Preliminary Size:408
Sequenced Size:867

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9079 2005-01-01 Successful iPCR screen
Cpr47Ea 2008-04-29 Release 5.5 accounting
Cpr47Ea 2008-08-15 Release 5.9 accounting
Cpr47Ea 2008-12-18 5.12 accounting

Clone Sequence Records

IP05065.complete Sequence

867 bp (867 high quality bases) assembled on 2006-01-26

GenBank Submission: BT024398

> IP05065.complete
AGCCTCCCAGCGCAGTACCCGCTATCAAGTCGCGAATCCGAAGTCATGTC
GCTCACCCACGCCTCCGCCGCAGCCCTCGTCTTGGCCCTCTGCTGCCTCA
GTTTCATTCAGGCGCAGCCACAACGCGGACTTCCCCCACCACGCGGCAAC
TCCTTCGACGCGAACGCGGTGATTCTCAAGCAGAACTTCGACCTGAATCC
CGATGGCTCCTATCAGTACAACTACGAGACAAGCAACGGAATCCGAGCGG
ATGAGGCTGGCTATTTGAAGAACCCGGGCAGTCAGATCGAGGCTCAGGTG
ATGCAGGGCTCCTACTCGTACACCGGACCCGATGGCGTGGTCTACACCAT
CACCTACATTGCTGATGAGAACGGATACCGCGCCGAAGGAGCCCACATAC
CCACACCGCCACCAGTTCGCGCCGCCGCCGCTCCCGGAAGATTCTTCAAG
TAATCCGCTCCGCTGTAGAATCGTGTTTTAATTCTTCATCGTTATGATCA
AGTTGGCAATCATTTCGTTGTGGGTCAGTGCCGAACTGGCCGAAAGTGAA
CCAGAAACAGACAGGAGAGAGAGAGAGAGAGAGAGAGCAGCTGCTCGTTG
GAGATCCTTTATCCCACCCATAATCATTTCCATTTTATTCCTGCCCCTGA
AAAATCTCACTACCTTCGTGCTTCATCTGTGCATTTCTACAGCCAATTCA
AATTCTACATTCTACTTAGTGCTTAACGAACAATATGTGAGATTATCATA
TGTAAATTACGTAAGATCGATTGTTAAATGTCGTACGGCAACGCATGCTC
AGCAATAAAACAAAAATTGCACAAAAATCAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA

IP05065.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:19:17
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr47Ea-RA 915 Cpr47Ea-RA 87..915 1..829 4145 100 Plus
Or47a-RA 1363 Or47a-RA 1197..1363 831..665 835 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:57:06
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 7139215..7139749 829..295 2675 100 Minus
chr2R 21145070 chr2R 7140180..7140358 221..43 880 99.4 Minus
chr2R 21145070 chr2R 7139831..7139908 299..222 390 100 Minus
chr2R 21145070 chr2R 7140819..7140862 44..1 220 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:44:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:57:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11251749..11252285 831..295 2685 100 Minus
2R 25286936 2R 11252716..11252894 221..43 895 100 Minus
2R 25286936 2R 11252367..11252444 299..222 390 100 Minus
2R 25286936 2R 11253355..11253398 44..1 220 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:12:11
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 11252948..11253484 831..295 2685 100 Minus
2R 25260384 2R 11253915..11254093 221..43 895 100 Minus
2R 25260384 2R 11253566..11253643 299..222 390 100 Minus
2R 25260384 2R 11254554..11254597 44..1 220 100 Minus
Blast to na_te.dros performed on 2019-03-16 09:57:04 has no hits.

IP05065.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:57:58 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 7139215..7139746 298..829 95 <- Minus
chr2R 7139833..7139908 222..297 100 <- Minus
chr2R 7140180..7140358 43..221 99 <- Minus
chr2R 7140821..7140862 1..42 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:25:57 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..408 46..453 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:33:47 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..408 46..453 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:53:32 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..408 46..453 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:08:03 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..408 46..453 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:50:27 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..408 46..453 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:05:14 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..408 46..453 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:33:47 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..829 1..829 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:53:32 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..829 1..829 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:08:03 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..408 46..453 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:50:27 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
Cpr47Ea-RA 1..829 1..829 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:57:58 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11251751..11252282 298..829 100 <- Minus
2R 11252369..11252444 222..297 100 <- Minus
2R 11252716..11252894 43..221 100 <- Minus
2R 11253357..11253398 1..42 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:57:58 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11251751..11252282 298..829 100 <- Minus
2R 11252369..11252444 222..297 100 <- Minus
2R 11252716..11252894 43..221 100 <- Minus
2R 11253357..11253398 1..42 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:57:58 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11251751..11252282 298..829 100 <- Minus
2R 11252369..11252444 222..297 100 <- Minus
2R 11252716..11252894 43..221 100 <- Minus
2R 11253357..11253398 1..42 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:53:32 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7139256..7139787 298..829 100 <- Minus
arm_2R 7139874..7139949 222..297 100 <- Minus
arm_2R 7140221..7140399 43..221 100 <- Minus
arm_2R 7140862..7140903 1..42 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:58:09 Download gff for IP05065.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11252950..11253481 298..829 100 <- Minus
2R 11253568..11253643 222..297 100 <- Minus
2R 11253915..11254093 43..221 100 <- Minus
2R 11254556..11254597 1..42 100   Minus

IP05065.hyp Sequence

Translation from 0 to 452

> IP05065.hyp
SLPAQYPLSSRESEVMSLTHASAAALVLALCCLSFIQAQPQRGLPPPRGN
SFDANAVILKQNFDLNPDGSYQYNYETSNGIRADEAGYLKNPGSQIEAQV
MQGSYSYTGPDGVVYTITYIADENGYRAEGAHIPTPPPVRAAAAPGRFFK
*

IP05065.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:32:48
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr47Ea-PA 135 CG9079-PA 1..135 16..150 713 100 Plus
Cpr49Aa-PB 144 CG30045-PB 6..117 26..142 299 50.4 Plus
Cpr65Az-PA 239 CG12330-PA 91..198 44..139 264 48.1 Plus
Cpr49Ae-PA 134 CG8505-PA 5..117 24..142 234 42.6 Plus
Cpr47Ee-PA 369 CG13222-PA 113..196 64..145 229 53.6 Plus

IP05065.pep Sequence

Translation from 45 to 452

> IP05065.pep
MSLTHASAAALVLALCCLSFIQAQPQRGLPPPRGNSFDANAVILKQNFDL
NPDGSYQYNYETSNGIRADEAGYLKNPGSQIEAQVMQGSYSYTGPDGVVY
TITYIADENGYRAEGAHIPTPPPVRAAAAPGRFFK*

IP05065.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:12:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12427-PA 135 GF12427-PA 1..135 1..135 608 94.1 Plus
Dana\GF12852-PA 141 GF12852-PA 5..104 10..119 242 47.7 Plus
Dana\GF10921-PA 101 GF10921-PA 18..99 40..122 217 48.2 Plus
Dana\GF10925-PA 107 GF10925-PA 20..100 41..122 214 48.8 Plus
Dana\GF23526-PA 115 GF23526-PA 33..113 41..122 209 46.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22686-PA 135 GG22686-PA 1..135 1..135 674 94.1 Plus
Dere\GG20286-PA 326 GG20286-PA 154..257 11..119 252 48.6 Plus
Dere\GG14086-PA 102 GG14086-PA 21..102 40..122 221 49.4 Plus
Dere\GG15326-PA 109 GG15326-PA 23..106 38..122 215 50.6 Plus
Dere\GG14082-PA 107 GG14082-PA 28..105 44..122 208 51.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21943-PA 175 GH21943-PA 40..175 1..135 523 80.9 Plus
Dgri\GH15646-PA 103 GH15646-PA 21..101 38..119 233 54.9 Plus
Dgri\GH15846-PA 106 GH15846-PA 21..104 38..122 228 50.6 Plus
Dgri\GH15845-PA 106 GH15845-PA 21..104 38..122 228 50.6 Plus
Dgri\GH20692-PA 142 GH20692-PA 6..105 11..118 222 44.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:27:52
Subject Length Description Subject Range Query Range Score Percent Strand
Cpr47Ea-PA 135 CG9079-PA 1..135 1..135 713 100 Plus
Cpr49Aa-PB 144 CG30045-PB 6..117 11..127 299 50.4 Plus
Cpr65Az-PA 239 CG12330-PA 91..198 29..124 264 48.1 Plus
Cpr49Ae-PA 134 CG8505-PA 5..117 9..127 234 42.6 Plus
Cpr47Ee-PA 369 CG13222-PA 113..196 49..130 229 53.6 Plus
Cpr47Ef-PD 601 CG13214-PD 122..222 25..129 224 44.8 Plus
Cpr47Ef-PC 612 CG13214-PC 122..222 25..129 224 44.8 Plus
Lcp65Ac-PA 109 CG6956-PA 23..106 38..122 218 49.4 Plus
Lcp65Af-PA 100 CG10533-PA 16..100 39..124 211 50 Plus
Cpr65Ax2-PB 102 CG18777-PB 22..100 43..122 210 47.5 Plus
Cpr65Ax2-PA 102 CG18777-PA 22..100 43..122 210 47.5 Plus
Cpr65Ax1-PA 102 CG34270-PA 22..100 43..122 210 47.5 Plus
Cpr65Ec-PA 127 CG8634-PA 18..104 33..127 210 44.2 Plus
Cpr67Fa2-PA 134 CG18349-PA 24..105 38..127 208 45.6 Plus
Cpr67Fa1-PA 134 CG7941-PA 24..105 38..127 208 45.6 Plus
Cpr11B-PB 195 CG2555-PB 47..157 22..129 207 40.2 Plus
Cpr11B-PA 197 CG2555-PA 47..157 22..129 207 40.2 Plus
Cpr49Ag-PA 134 CG8511-PA 7..133 11..122 206 39.4 Plus
Cpr65Aw-PA 117 CG32404-PA 21..104 35..119 203 43.5 Plus
Cpr49Ab-PA 259 CG30042-PA 140..239 23..123 202 41.2 Plus
Lcp65Ad-PB 108 CG6955-PB 26..106 40..121 199 47.6 Plus
Lcp65Ad-PA 108 CG6955-PA 26..106 40..121 199 47.6 Plus
Cpr78Cc-PA 119 CG7658-PA 4..104 13..127 199 39 Plus
Cpr49Ah-PA 190 CG8515-PA 53..135 43..124 198 46.5 Plus
Cpr67Fb-PA 122 CG18348-PA 21..99 38..124 195 44.8 Plus
Cpr65Av-PA 111 CG32405-PA 3..109 7..119 187 37.9 Plus
Cpr49Af-PB 126 CG8510-PB 23..102 44..123 186 40 Plus
Cpr49Af-PA 126 CG8510-PA 23..102 44..123 186 40 Plus
Edg78E-PB 122 CG7673-PB 29..100 46..126 179 45.7 Plus
Edg78E-PA 122 CG7673-PA 29..100 46..126 179 45.7 Plus
Cpr65Aw-PB 86 CG32404-PB 14..73 60..119 178 51.7 Plus
Lcp65Ag3-PA 105 CG18779-PA 25..103 43..122 176 41.2 Plus
Pcp-PA 184 CG3440-PA 4..103 11..122 176 37.5 Plus
Lcp65Ae-PA 99 CG10529-PA 19..96 41..119 173 40.5 Plus
Lcp65Ag2-PA 105 CG10534-PA 25..103 43..122 173 40 Plus
Lcp65Ag1-PA 105 CG10530-PA 25..103 43..122 173 40 Plus
Cpr49Ad-PA 166 CG8836-PA 65..139 39..112 169 45.3 Plus
Acp65Aa-PA 105 CG10297-PA 39..104 54..119 167 42.4 Plus
Lcp65Aa-PA 102 CG7287-PA 31..100 49..119 166 43.7 Plus
Lcp65Ab1-PA 104 CG32400-PA 21..102 41..122 166 42.2 Plus
Lcp65Ab2-PA 104 CG18773-PA 21..102 41..122 166 42.2 Plus
Cpr65Eb-PA 179 CG8638-PA 8..109 11..127 162 35.6 Plus
Lcp1-PB 130 CG11650-PB 5..111 12..129 151 33.1 Plus
Lcp1-PA 130 CG11650-PA 5..111 12..129 151 33.1 Plus
Lcp2-PB 126 CG8697-PB 19..107 32..129 141 33.7 Plus
Lcp2-PA 126 CG8697-PA 19..107 32..129 141 33.7 Plus
Cpr78Cb-PB 140 CG7663-PB 52..113 53..123 139 43.7 Plus
Cpr78Cb-PA 140 CG7663-PA 52..113 53..123 139 43.7 Plus
Cpr47Eg-PA 117 CG9070-PA 19..102 38..127 135 38 Plus
Cpr65Ea-PA 127 CG8640-PA 34..97 53..124 135 36.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:12:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19650-PA 136 GI19650-PA 1..136 1..135 522 80.9 Plus
Dmoj\GI12621-PA 253 GI12621-PA 135..212 43..119 224 56.4 Plus
Dmoj\GI12618-PA 110 GI12618-PA 20..107 32..122 219 50.5 Plus
Dmoj\GI19053-PA 141 GI19053-PA 6..105 11..118 218 43.5 Plus
Dmoj\GI19905-PA 349 GI19905-PA 102..185 49..130 209 53.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:12:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16752-PA 136 GL16752-PA 3..136 2..135 536 91 Plus
Dper\GL11629-PA 149 GL11629-PA 13..113 11..119 233 45.9 Plus
Dper\GL15520-PA 104 GL15520-PA 21..102 40..122 217 49.4 Plus
Dper\GL15517-PA 104 GL15517-PA 21..102 40..122 217 49.4 Plus
Dper\GL16749-PA 398 GL16749-PA 105..181 53..129 213 54.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:12:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21525-PA 136 GA21525-PA 3..136 2..135 582 90.3 Plus
Dpse\GA15602-PA 149 GA15602-PA 13..113 11..119 230 45 Plus
Dpse\GA23851-PA 104 GA23851-PA 23..102 42..122 215 50.6 Plus
Dpse\GA11560-PA 248 GA11560-PA 129..205 43..118 214 55.8 Plus
Dpse\GA23852-PA 104 GA23852-PA 23..102 42..122 210 49.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:12:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20464-PA 134 GM20464-PA 1..134 1..135 440 83.7 Plus
Dsec\GM21373-PA 294 GM21373-PA 183..259 43..119 234 57.1 Plus
Dsec\GM14766-PA 239 GM14766-PA 116..193 43..119 211 55.1 Plus
Dsec\GM14760-PA 109 GM14760-PA 23..106 38..122 210 49.4 Plus
Dsec\GM19678-PA 109 GM19678-PA 23..106 38..122 210 49.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:12:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10870-PA 267 GD10870-PA 156..232 43..119 234 57.1 Plus
Dsim\GD13145-PA 98 GD13145-PA 16..97 39..121 212 48.2 Plus
Dsim\GD10784-PA 368 GD10784-PA 113..196 49..130 211 53.6 Plus
Dsim\GD13939-PA 107 GD13939-PA 23..104 40..122 207 49.4 Plus
Dsim\GD14266-PA 116 GD14266-PA 24..102 38..124 201 47.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:12:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15017-PA 137 GJ15017-PA 1..137 1..135 537 82.5 Plus
Dvir\GJ12743-PA 255 GJ12743-PA 133..215 43..124 248 56.6 Plus
Dvir\GJ12749-PA 105 GJ12749-PA 20..103 38..122 241 51.8 Plus
Dvir\GJ12742-PA 102 GJ12742-PA 4..100 10..119 231 42.7 Plus
Dvir\GJ12740-PA 110 GJ12740-PA 27..107 41..122 218 50 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:12:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20648-PA 137 GK20648-PA 1..137 1..135 551 78.1 Plus
Dwil\GK16921-PA 105 GK16921-PA 23..105 41..124 225 48.8 Plus
Dwil\GK17267-PA 101 GK17267-PA 21..100 40..120 215 50.6 Plus
Dwil\GK16924-PA 104 GK16924-PA 24..102 43..122 212 48.8 Plus
Dwil\GK16923-PA 104 GK16923-PA 24..104 43..124 210 46.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:12:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13041-PA 135 GE13041-PA 1..135 1..135 693 97 Plus
Dyak\GE12447-PA 210 GE12447-PA 53..142 30..119 232 52.2 Plus
Dyak\GE21547-PA 238 GE21547-PA 115..192 43..119 213 55.1 Plus
Dyak\GE12871-PA 370 GE12871-PA 113..196 49..130 212 53.6 Plus
Dyak\GE20506-PA 108 GE20506-PA 21..104 35..119 203 45.9 Plus