IP05237.complete Sequence
1129 bp (1129 high quality bases) assembled on 2006-08-03
GenBank Submission: BT028778
> IP05237.complete
CGCAGCTCCGGTCAGCTGCTTCGCAAAATCGACAAAAAGGAGTCACAAAA
AAACGCGCGCGGTGCATTTAGCCACAAATCTCTGAAAGTGAAAATACAAA
TATTGAAACAGTGAAATCCACAAACCAGCCAAAAGTGAAACAAAATTGAA
CACAGTGCTTAATTAATATCGAAGCTAAAGGGATAGAAATCCGATTAGGA
AAAGGGAAAGCTGCAGCGCTGCTCCTGTTTGCCAAATATTGATTCGCAAG
TGTGCCGCTGAAAAATCGATTATTAAAGCCACTTTCCACACAGCTGGTGG
TTGTTGTTGCCGTGAGGATGGAGGTGGTGCTTGGGGTGGTGGTTGCATAG
GGTTGCGTGCCGCGATGTGGGAAATCAACAGCAACATTGGCACATCCACA
TCCAGATCCAGAGGCACACTTCCAACTGTTTTGACGTGGTCGGGTTCCAA
TGGCGCTGACACTACCGAATGCTGCAGCGCAGCCTTGCAGCCATCCAGCG
GCGACGCGTTGCATGTGCAGCAGCAACAGCAACAGCAGCAGCAACATCAG
CAGCAGCAGCAGCAGCAACAGCAACAGCAGCAACAACAGCAGCAGCAGCA
GGATACGAAAACGAGGATGACAACGACCACAGGCAAACGCGGAGGACACA
GATACAGAAGCAGGCTCAGTCACCGAAGCACAGCAACAATTGCTGCATAT
TAGGCAGTAAAGTAAAGTTAAACACAACCCAAAACCGAAAAGACTAGCCC
AAAATTTACTCAAAAACCAACACAAGTGGAAAGCATTAATCGGAATGTCG
AACTCTATGCATCGCACAAAGTTACGTTAAGTATACGACGCGTATTTCCA
GCTGCAAAACGAACCAAAAACGAACCGAACGAAACGAAACGCACAGGTGC
ATCTGCAGACCCCACTACGCCCCTAAAAGCCCACTCCCCCCCCTTTTCGA
ACCCTCAGCCCCTCATTAGGCCACCCCCTCTGGGGTATCTACACCAATTG
ACAAGCAATCGAGGCAATGCAGTATGAATGAACTTGTTTAGTCGACAATT
TTTTAAGTGCACTTTCGTAAGGCTGATTTTCAATTTATTTCGATGTTGTG
CTTCTACACCCAAAAAAAAAAAAAAAAAA
IP05237.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:28:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12912-RA | 339 | CG12912-RA | 1..339 | 365..703 | 1695 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 14:01:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 6121010..6122120 | 1111..1 | 5450 | 99.4 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:45:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 14:01:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 10233456..10234576 | 1121..1 | 5605 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:19:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 10234655..10235775 | 1121..1 | 5605 | 100 | Minus |
Blast to na_te.dros performed 2019-03-16 14:01:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmer\R1A3 | 3772 | Dmer\R1A3 MERCR1A3 3772bp | 656..728 | 602..530 | 185 | 72.6 | Minus |
Burdock | 6411 | Burdock DMU89994 6411bp Derived from U89994 (g1905850) (Rel. 51, Last updated, Version 1). | 2027..2087 | 67..126 | 131 | 70.5 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 6444..6534 | 94..189 | 125 | 63.5 | Plus |
IP05237.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 14:02:27 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 6121010..6121519 | 602..1111 | 99 | == | Minus |
chr2R | 6121605..6122120 | 1..516 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:26:23 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12912-RA | 1..339 | 365..703 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:50:19 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12912-RA | 1..339 | 365..703 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 14:41:29 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12912-RA | 1..339 | 365..703 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:31:05 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12912-RA | 1..339 | 365..703 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:22:10 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12912-RA | 1..339 | 365..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:23:45 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12912-RA | 1..339 | 365..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:50:19 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12912-RA | 1..1111 | 1..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 14:41:29 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12912-RB | 32..1142 | 1..1111 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:31:05 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12912-RA | 1..339 | 365..703 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:22:10 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Hr46-RE | 32..1142 | 1..1111 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:02:27 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10233466..10234576 | 1..1111 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:02:27 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10233466..10234576 | 1..1111 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 14:02:27 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10233466..10234576 | 1..1111 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 14:41:29 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 6120971..6122081 | 1..1111 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:09:30 Download gff for
IP05237.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 10234665..10235775 | 1..1111 | 100 | | Minus |
IP05237.pep Sequence
Translation from 364 to 702
> IP05237.pep
MWEINSNIGTSTSRSRGTLPTVLTWSGSNGADTTECCSAALQPSSGDALH
VQQQQQQQQQHQQQQQQQQQQQQQQQQQQDTKTRMTTTTGKRGGHRYRSR
LSHRSTATIAAY*
IP05237.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:53:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF19793-PA | 125 | GF19793-PA | 27..121 | 16..110 | 137 | 57.8 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:53:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG25224-PA | 157 | GG25224-PA | 31..157 | 1..112 | 299 | 75.6 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12912-PB | 112 | CG12912-PB | 1..112 | 1..112 | 585 | 100 | Plus |
CG12912-PA | 112 | CG12912-PA | 1..112 | 1..112 | 585 | 100 | Plus |
CHES-1-like-PC | 1267 | CG12690-PC | 256..334 | 21..97 | 158 | 50.6 | Plus |
CHES-1-like-PD | 1268 | CG12690-PD | 256..334 | 21..97 | 158 | 50.6 | Plus |
CHES-1-like-PB | 1268 | CG12690-PB | 256..334 | 21..97 | 158 | 50.6 | Plus |
CHES-1-like-PA | 1268 | CG12690-PA | 256..334 | 21..97 | 158 | 50.6 | Plus |
dl-PB | 677 | CG6667-PB | 479..537 | 53..111 | 150 | 54.2 | Plus |
dl-PA | 677 | CG6667-PA | 479..537 | 53..111 | 150 | 54.2 | Plus |
dl-PE | 677 | CG6667-PE | 479..537 | 53..111 | 150 | 54.2 | Plus |
dl-PD | 677 | CG6667-PD | 479..537 | 53..111 | 150 | 54.2 | Plus |
sbb-PH | 2302 | CG5580-PH | 1933..1988 | 50..105 | 148 | 55.4 | Plus |
sbb-PD | 2302 | CG5580-PD | 1933..1988 | 50..105 | 148 | 55.4 | Plus |
sbb-PG | 2312 | CG5580-PG | 1943..1998 | 50..105 | 148 | 55.4 | Plus |
sbb-PJ | 2330 | CG5580-PJ | 1943..1998 | 50..105 | 148 | 55.4 | Plus |
mask-PF | 3623 | CG33106-PF | 807..836 | 50..79 | 144 | 93.3 | Plus |
mask-PD | 3636 | CG33106-PD | 820..849 | 50..79 | 144 | 93.3 | Plus |
mask-PE | 4000 | CG33106-PE | 1185..1214 | 50..79 | 144 | 93.3 | Plus |
mask-PB | 4001 | CG33106-PB | 1185..1214 | 50..79 | 144 | 93.3 | Plus |
mask-PA | 4001 | CG33106-PA | 1185..1214 | 50..79 | 144 | 93.3 | Plus |
mask-PC | 4010 | CG33106-PC | 1197..1226 | 50..79 | 144 | 93.3 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:53:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL10485-PA | 101 | GL10485-PA | 1..53 | 1..55 | 172 | 67.3 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:54:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA11903-PA | 104 | GA11903-PA | 1..87 | 1..107 | 179 | 47.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:54:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20544-PA | 138 | GM20544-PA | 31..138 | 1..112 | 499 | 93.8 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:54:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD26000-PA | 142 | GD26000-PA | 31..142 | 1..112 | 527 | 96.4 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:54:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE21699-PA | 109 | GE21699-PA | 1..109 | 1..112 | 336 | 92.9 | Plus |
IP05237.hyp Sequence
Translation from 364 to 702
> IP05237.hyp
MWEINSNIGTSTSRSRGTLPTVLTWSGSNGADTTECCSAALQPSSGDALH
VQQQQQQQQQHQQQQQQQQQQQQQQQQQQDTKTRMTTTTGKRGGHRYRSR
LSHRSTATIAAY*
IP05237.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:34:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12912-PB | 112 | CG12912-PB | 1..112 | 1..112 | 585 | 100 | Plus |
CG12912-PA | 112 | CG12912-PA | 1..112 | 1..112 | 585 | 100 | Plus |
CHES-1-like-PC | 1267 | CG12690-PC | 256..334 | 21..97 | 158 | 50.6 | Plus |
CHES-1-like-PD | 1268 | CG12690-PD | 256..334 | 21..97 | 158 | 50.6 | Plus |
CHES-1-like-PB | 1268 | CG12690-PB | 256..334 | 21..97 | 158 | 50.6 | Plus |