IP05259.complete Sequence
1094 bp assembled on 2009-06-15
GenBank Submission: BT088820.1
> IP05259.complete
CGGAAATGAAGCTACTCTGCGTTGTTTTGGTTATTTACGTTGTGGCTCTG
ACCCTCTTCGGAGTCGATGGACGTGGTGGGGGCACCACAAATGGAGTGGA
GGAACCAAAGTTCGTCGGTTTGTTCAGGCGGGCAAGGCGCCATGTCCCCG
CAATGAAAACCGCCCTTCTTCACGGCAACGAACCGCCTCCACCTCCGAAA
TTCCGATCCCGTCGTGATACATTGGAGGACAAGCTCGTGGCCAATGATGA
TCCTCCACCACCGCCGCAGTTCAGACAACGTCGTCAGGCTCCACCTGGAA
TGCCACCACCGCCGGACGGCCTTCCACCACCACCCCAGTTCCTTCTCTAA
AGTAATGTAAAGCATAAAGTTGGGCGTTTGTGCATGTATTTGGGAACCAC
ATCGAAGCTAATAAAAGTAGTTTGAAGCATTCCAAAAATGACCACACCCG
AATTTCCTTAAGCCATTAACCATAAACCATAGAGGGTAATTTTCTGGGAA
ATTCAACGGGCTAATCACCTTGTGCAGCTGCTCTCGGGATAATGGGCCAT
AATCCTGTGACAGGTAGAGAAGAAAACCTGTTCTACCTGCACCATCTATT
GCTCCTATTTAAGGTGAGTCTGTGCTCTTCGGAAATCAGTTTACATTTGC
CAACAGATCATACAACACGCACACACACCTTTCGAGATGAAGTTCGTGGC
CATTCTTCTGCTGAGCAGCCTCACCATTGCGATGGTTTTGGCATTTCCTG
ATAACGACGATAAAAATGTTCTTGTGCCAGCTGATATGCAGCATGTTGCT
CCACTGGCCGCAGCAGCAGATCCCCCGACGTCGGCAGACCAAGTCTCTAA
CAGCATACGCGGTCCACGCCATCTCCTGAGCAAATTGTTCCAGCCCAAGA
CCGTGGTGGTGCAGCCAGTGATTGTGGAGCAGGTGGCTCCAAGACAGTAC
CCCGGATACGCACAGCCCTATCCGTACTACAACCAGGGCCGACGCTACTG
GTAGACCGTATTTTAAGCAGCTATTTGTAACCGAATTTAATAAAATAAAG
ACGCCTGGCCTTTAAGTCAAAGATTAAAAAAAAAAAAAAAAAAA
IP05259.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:32:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13428-RA | 692 | CG13428-RA | 116..692 | 1..577 | 2885 | 100 | Plus |
CG13427-RA | 438 | CG13427-RA | 1..438 | 638..1075 | 2190 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:47:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 16425632..16426432 | 1075..276 | 3790 | 98.5 | Minus |
chr2R | 21145070 | chr2R | 16427061..16427162 | 102..1 | 495 | 99 | Minus |
chr2R | 21145070 | chr2R | 16426721..16426796 | 206..131 | 365 | 98.7 | Minus |
chr2R | 21145070 | chr2R | 16426501..16426569 | 275..207 | 345 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:45:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:47:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20538875..20539676 | 1077..276 | 4010 | 100 | Minus |
2R | 25286936 | 2R | 20540305..20540406 | 102..1 | 510 | 100 | Minus |
2R | 25286936 | 2R | 20539965..20540040 | 206..131 | 380 | 100 | Minus |
2R | 25286936 | 2R | 20539745..20539813 | 275..207 | 345 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:48:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 20540074..20540875 | 1077..276 | 4010 | 100 | Minus |
2R | 25260384 | 2R | 20541504..20541605 | 102..1 | 510 | 100 | Minus |
2R | 25260384 | 2R | 20541164..20541239 | 206..131 | 380 | 100 | Minus |
2R | 25260384 | 2R | 20540944..20541012 | 275..207 | 345 | 100 | Minus |
2R | 25260384 | 2R | 20541419..20541451 | 132..100 | 165 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 21:47:55 has no hits.
IP05259.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:48:53 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 16426977..16427006 | 102..131 | 100 | <- | Minus |
chr2R | 16427062..16427162 | 1..101 | 99 | | Minus |
chr2R | 16425632..16426432 | 276..1075 | 98 | <- | Minus |
chr2R | 16426501..16426569 | 207..275 | 100 | <- | Minus |
chr2R | 16426721..16426795 | 132..206 | 98 | <- | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:33 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13428-RA | 1..345 | 6..350 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:47:56 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13428-RA | 1..345 | 6..350 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:02:54 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13428-RA | 1..345 | 6..350 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:31:36 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13428-RA | 1..345 | 6..350 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-15 14:53:07 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13428-RA | 43..483 | 1..441 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:47:56 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13428-RA | 43..483 | 1..441 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:02:54 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13427-RA | 1..440 | 636..1075 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:31:36 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13427-RA | 1..440 | 636..1075 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:48:53 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20538877..20539676 | 276..1075 | 100 | <- | Minus |
2R | 20539745..20539813 | 207..275 | 100 | <- | Minus |
2R | 20539965..20540039 | 132..206 | 100 | <- | Minus |
2R | 20540221..20540250 | 102..131 | 100 | <- | Minus |
2R | 20540306..20540406 | 1..101 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:48:53 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20538877..20539676 | 276..1075 | 100 | <- | Minus |
2R | 20539745..20539813 | 207..275 | 100 | <- | Minus |
2R | 20539965..20540039 | 132..206 | 100 | <- | Minus |
2R | 20540221..20540250 | 102..131 | 100 | <- | Minus |
2R | 20540306..20540406 | 1..101 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:48:53 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20538877..20539676 | 276..1075 | 100 | <- | Minus |
2R | 20539745..20539813 | 207..275 | 100 | <- | Minus |
2R | 20539965..20540039 | 132..206 | 100 | <- | Minus |
2R | 20540221..20540250 | 102..131 | 100 | <- | Minus |
2R | 20540306..20540406 | 1..101 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:02:54 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16426382..16427181 | 276..1075 | 100 | <- | Minus |
arm_2R | 16427250..16427318 | 207..275 | 100 | <- | Minus |
arm_2R | 16427470..16427544 | 132..206 | 100 | <- | Minus |
arm_2R | 16427726..16427755 | 102..131 | 100 | <- | Minus |
arm_2R | 16427811..16427911 | 1..101 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:23:27 Download gff for
IP05259.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20540076..20540875 | 276..1075 | 100 | <- | Minus |
2R | 20540944..20541012 | 207..275 | 100 | <- | Minus |
2R | 20541164..20541238 | 132..206 | 100 | <- | Minus |
2R | 20541420..20541449 | 102..131 | 100 | <- | Minus |
2R | 20541505..20541605 | 1..101 | 100 | | Minus |
IP05259.hyp Sequence
Translation from 2 to 349
> IP05259.hyp
EMKLLCVVLVIYVVALTLFGVDGRGGGTTNGVEEPKFVGLFRRARRHVPA
MKTALLHGNEPPPPPKFRSRRDTLEDKLVANDDPPPPPQFRQRRQAPPGM
PPPPDGLPPPPQFLL*
IP05259.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:34:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13428-PA | 114 | CG13428-PA | 1..114 | 2..115 | 620 | 100 | Plus |
CG13428-PB | 89 | CG13428-PB | 1..89 | 2..115 | 444 | 78.1 | Plus |
IP05259.pep Sequence
Translation from 686 to 1003
> IP05259.pep
MKFVAILLLSSLTIAMVLAFPDNDDKNVLVPADMQHVAPLAAAADPPTSA
DQVSNSIRGPRHLLSKLFQPKTVVVQPVIVEQVAPRQYPGYAQPYPYYNQ
GRRYW*
IP05259.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:01:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF12666-PA | 113 | GF12666-PA | 1..113 | 1..105 | 241 | 49.6 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:01:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG20861-PA | 105 | GG20861-PA | 1..105 | 1..105 | 446 | 90.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13427-PA | 105 | CG13427-PA | 1..105 | 1..105 | 545 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:01:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI18669-PA | 112 | GI18669-PA | 1..90 | 1..96 | 152 | 41.2 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:01:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL16812-PA | 104 | GL16812-PA | 1..100 | 1..99 | 193 | 48.5 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:01:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA12280-PA | 104 | GA12280-PA | 1..100 | 1..99 | 195 | 49.5 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:01:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19786-PA | 105 | GM19786-PA | 1..105 | 1..105 | 445 | 93.3 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:01:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25277-PA | 72 | GD25277-PA | 1..72 | 34..105 | 363 | 97.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:01:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE13799-PA | 105 | GE13799-PA | 1..105 | 1..105 | 478 | 93.3 | Plus |