IP05263.complete Sequence
641 bp (641 high quality bases) assembled on 2005-03-06
GenBank Submission: BT022385
> IP05263.complete
CGACGAAGCTAGCTATTTTCGTTTGTGTATTTTCATGCCTGGACAATCAG
CGATGAATGTATAAGGCGAAAATATACAGTTTCTTCGGGATATCTTTTAG
AATAAAAAATTGTGTATAAGCTCCGCTGTTACACTTCCTTCCACCAACGA
GTCTCAAAAATATCTGTGGACCATGTGCATGCAAGTTCCACGGTTTGGAT
GTCGAGTTCCAGTTTCCAGTTCCCGTTGTAAGACCGGTGCAACCAGATCT
TGTCGAAAGCCCGGATCTCGCTACAGAACCTTCTGCACTCCACCACCTCG
CTGTAGTCCCAGATCCTGCTGCACATCCGAATCCTGCTGCAAATCCGGGT
CCTGCTGCGGACCATGTGGGTCATGCTCGAATGGCTGTGCCGCCTGCTTA
TCCTCCTGCTGTGGGATATTCCCCGAAACCTGCTGTGGTCCGTGGTGTGA
GTCCTGTCTGGATCCTTCCTGGTTCTCATGGCTGGCTCCCGATCTCGGGC
GATCCTGCTGTTGTGCTTGCATGACCTGTTGTCGATCCAAGTGCTGATGA
AATATGGATAGTGGAAAGTCGTTGTGAACAAATCAATTGTAAAAAAAATT
CAATTTTTAATTTAATTTGAATTAAAAAAAAAAAAAAAAAA
IP05263.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:49:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MB6.chr3L.pasa.7444.a | 656 | MB6.chr3L.pasa.7444.a | 34..636 | 1..603 | 3015 | 100 | Plus |
CG13479-RA | 350 | CG13479-RA | 18..350 | 603..271 | 1665 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:08:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 14557654..14558220 | 37..603 | 2820 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 14557555..14557591 | 1..37 | 185 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:45:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:08:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 14567547..14568113 | 37..603 | 2835 | 100 | Plus |
3L | 28110227 | 3L | 14567448..14567484 | 1..37 | 185 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:38:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 14560647..14561213 | 37..603 | 2835 | 100 | Plus |
3L | 28103327 | 3L | 14560548..14560584 | 1..37 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 08:08:05 has no hits.
IP05263.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:09:20 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 14557555..14557590 | 1..36 | 100 | -> | Plus |
chr3L | 14557654..14558205 | 37..588 | 99 | -> | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:20:17 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 1..375 | 173..547 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:12:40 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 1..375 | 173..547 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:04:21 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6623-RA | 52..72 | 298..318 | 95 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:35:02 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 1..375 | 173..547 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:20:44 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13479-RA | 7..350 | 271..615 | 98 | | Minus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:20:17 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 9..621 | 1..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:40 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 9..621 | 1..615 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:04:21 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13479-RA | 7..350 | 271..615 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:35:02 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42758-RA | 9..621 | 1..615 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:20 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14567448..14567483 | 1..36 | 100 | -> | Plus |
3L | 14567547..14568113 | 37..603 | 100 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:20 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14567448..14567483 | 1..36 | 100 | -> | Plus |
3L | 14567547..14568113 | 37..603 | 100 | -> | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:09:20 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14567448..14567483 | 1..36 | 100 | -> | Plus |
3L | 14567547..14568113 | 37..603 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:40 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 14560548..14560583 | 1..36 | 100 | -> | Plus |
arm_3L | 14560647..14561213 | 37..603 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:40:30 Download gff for
IP05263.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 14560647..14561213 | 37..603 | 100 | -> | Plus |
3L | 14560548..14560583 | 1..36 | 100 | -> | Plus |
IP05263.pep Sequence
Translation from 172 to 546
> IP05263.pep
MCMQVPRFGCRVPVSSSRCKTGATRSCRKPGSRYRTFCTPPPRCSPRSCC
TSESCCKSGSCCGPCGSCSNGCAACLSSCCGIFPETCCGPWCESCLDPSW
FSWLAPDLGRSCCCACMTCCRSKC*
IP05263.pep Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42758-PA | 124 | CG42758-PA | 1..124 | 1..124 | 764 | 100 | Plus |
Pif2-PA | 118 | CG31483-PA | 2..69 | 44..124 | 160 | 42 | Plus |
Pif2-PA | 118 | CG31483-PA | 18..117 | 38..124 | 137 | 35 | Plus |
IP05263.hyp Sequence
Translation from 172 to 546
> IP05263.hyp
MCMQVPRFGCRVPVSSSRCKTGATRSCRKPGSRYRTFCTPPPRCSPRSCC
TSESCCKSGSCCGPCGSCSNGCAACLSSCCGIFPETCCGPWCESCLDPSW
FSWLAPDLGRSCCCACMTCCRSKC*
IP05263.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:34:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42758-PA | 124 | CG42758-PA | 1..124 | 1..124 | 764 | 100 | Plus |
Pif2-PA | 118 | CG31483-PA | 2..69 | 44..124 | 160 | 42 | Plus |
Pif2-PA | 118 | CG31483-PA | 18..117 | 38..124 | 137 | 35 | Plus |