Clone IP05285 Report

Search the DGRC for IP05285

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:52
Well:85
Vector:pOT2
Associated Gene/Transcriptscu-RA
Protein status:IP05285.pep: gold
Preliminary Size:387
Sequenced Size:2393

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13981 2005-01-01 Successful iPCR screen
scu 2008-04-29 Release 5.5 accounting
CG13981 2008-08-15 Release 5.9 accounting
CG42368 2008-12-18 5.12 accounting

Clone Sequence Records

IP05285.complete Sequence

2393 bp (2393 high quality bases) assembled on 2006-09-13

GenBank Submission: BT029045

> IP05285.complete
TCGAGTCCGCCGACAACACAACCGCCGCCCACAACCACAACGCTGCGGCG
GACGACAACAACCGCGGCGGAAATCGCACTGGACGGCTACATCAACACGC
CCCTGAATGGCAATGGCATTGGCATTGTGGGCGAAGGACCCACAAATTCG
GTGATTGCGTCCGGCAAATCGAGCATTAAATACCTATCGAATCTGAACGA
GATCGACAAGTCGAAGCAGAAGCTGACGGGCAGCAGTCCCAAGGGATTCG
ATTGGTCCAAGGGCAAGAGCAGCGGGAGTCATGGCAACCTAATGGCGTCC
AGTTGGCCCCTCATCTGCTGCATCCTCGCACTGCTGACGACACACTCGTG
TGGTTGAGAACTATGTGCGATTCCATTTTAATAAAGTGCCATTACAAACA
GTCGAAATGAAAGGTGTTCGAAGCCGATGCATACGATTAGCCATAACAAC
TGTGTAATTAATTAAGCGAATTGCAATTTGCAAACGTTAACGAAGTCAAG
CTTTGGTTTTCCCCGAAACTCCCTATGCAGCCCATTAATATTTGATTACG
TTTGGTGGCGAAAACCACAGCGTGTTTTTAGGCAAACAAAGTTACCAAAT
TAATCAACCTCGCATATTTGTTTACCATTCGTTCGGAAGCACTCTAAAAT
ATTTTCTAAAAATTCGTTTGGTTTTAAAACCACTATACCATCGGTGAGGG
TATGCGAAGAATGTTGTAAAAAGCATTTCGGCAGGGCCAAAGCAAACATG
CGATGCAAACCAAAGCACATAAATCCTGGTTAGTTAGATATAAAATCAAT
TAATTTGCATAAATACAAGTGGGAAAAAATAGTATACCCTTCGAATGATG
CCAAATTGTTAAAAAGAGAGCACTACTCACTCACCTCCAACTGTAAATAA
GCGCGTATATGCATGGATAAAACCCCAAATGCAATTGTAAATTATGTACT
CGTTATAGGCACTAGAAATGAATGTTCATTTGTACGAGAGTAGGCATCAA
ACCATTTCAAAACTAGATATTTAACGGGAAAGCGAAAGGCTTAAATACTC
TGAAAAACAGGCACCTAAAATGCATTAATCAAAAACCATTAACCTAAATA
AGTAACTAAGCAAATATGAATTACGAATATTCACGATTGAAGCGAAAACT
GTTGATACATAATTTAGTTAGCTGATCAGTTAAGACGGGTTTACAGTTGA
GAAATAATCCAAATAAAGCCAAATCCAAATATGTAAGTTCTAAACTACTC
ATACAGAAATACATATATATATATATATTTAAATACCTACATATATCATA
GGCCTTAGTTTGTGTTTCTTAACGATAAGAGTGATAATGTATATTTATTA
ACTTGCTCCCCGAGCGGAACAAACTGGCACTGCGAAAGAAACAAATAAAA
TATCTATGTATTTGGGATTGCTTCTTAAAAAAAAAAAAAAAAAAAAAAAA
CTCGAGGAACAATGATCAAGAACGCCGTTTCCCTGGTGACCGGAGGAGCC
TCTGGACTGGGCCGCGCCACCGCCGAGCGCCTGGCCAAGCAGGGCGCCAG
CGTGATCCTGGCCGATCTGCCCTCCTCCAAGGGCAACGAGGTGGCCAAGG
AGCTGGGCGACAAGGTGGTCTTCGTGCCCGTGGACGTGACCTCCGAGAAG
GATGTGAGCGCCGCTCTGCAGACGGCCAAGGATAAGTTCGGTCGTCTGGA
TCTGACTGTGAACTGTGCGGGCACAGCCACCGCGGTAAAGACGTTCAACT
TCAACAAGAACGTGGCGCACCGCCTGGAAGACTTCCAGCGGGTGATCAAC
ATCAATACCGTGGGCACGTTCAATGTGATCCGTCTGTCCGCCGGACTGAT
GGGCGCCAATGAGCCCAATCAGGATGGACAGCGCGGCGTGATCGTGAACA
CCGCCTCGGTGGCTGCCTTTGATGGCCAGATCGGCCAGGCGGCCTACTCC
GCCTCCAAGGCAGCCGTGGTGGGCATGACCCTGCCCATTGCCCGTGACTT
GAGCACCCAGGGCATACGTATCTGCACCATTGCACCGGGTTTGTTCAACA
CGCCTATGCTGGCCGCCCTGCCGGAGAAGGTGCGCACCTTCCTGGCCAAG
TCCATACCGTTCCCGCAGCGCCTGGGCGAGCCCAGTGAGTACGCCCACCT
GGTGCAGGCCATCTACGAGAATCCGCTGCTCAACGGCGAGGTCATCCGTA
TCGACGGTGCTCTGCGCATGATGCCCTAGATCCGGCTGAGCACTGTCTTG
GACCTGTGGAAGTGGCTCGATCAGTTTGCATTTATCTATTTTCTAGTGGT
TAAGCTGAAAAGTTTTATTATCTGTCCCGAAATTATGTAATAATTGCTAT
TAAACACACAATGTCACATTTCAAAAAAAAAAAAAAAAAAAAA

IP05285.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:15:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG42368-RA 3160 CG42368-RA 1731..3160 1..1430 7150 100 Plus
scu-RA 1237 scu-RA 161..1079 1457..2375 4580 99.8 Plus
nc_24518.a 187 nc_24518.a 28..187 1470..1629 800 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:03:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 6376763..6378027 1430..170 6035 98.7 Minus
chrX 22417052 chrX 17981265..17982168 1469..2372 4505 99.9 Plus
chr2L 23010047 chr2L 6378110..6378278 169..1 845 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:45:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:03:26
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6377767..6379027 1430..170 6305 100 Minus
X 23542271 X 18091950..18092856 1469..2375 4520 99.9 Plus
2L 23513712 2L 6379110..6379278 169..1 845 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:09:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6377767..6379027 1430..170 6305 100 Minus
X 23527363 X 18100048..18100954 1469..2375 4520 99.8 Plus
2L 23513712 2L 6379110..6379278 169..1 845 100 Minus
Blast to na_te.dros performed on 2019-03-16 06:03:26 has no hits.

IP05285.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:04:21 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 6376763..6378027 170..1430 96 <- Minus
chr2L 6378110..6378278 1..169 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:26:31 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
scu-RA 1..768 1462..2229 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:27:15 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
scu-RA 1..768 1462..2229 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:15:30 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
scu-RA 1..768 1462..2229 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:49:31 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
scu-RA 1..768 1462..2229 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:14:39 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
scu-RA 1..768 1462..2229 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:57:30 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
CG42368-RA 1705..3134 1..1430 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:27:15 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
CG42368-RA 1705..3134 1..1430 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:15:30 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
CG42368-RA 1725..3150 1..1426 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:49:31 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
scu-RA 132..1047 1457..2372 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:14:39 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
CG42368-RA 1725..3150 1..1426 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:21 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6377767..6379027 170..1430 100 <- Minus
2L 6379110..6379278 1..169 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:21 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6377767..6379027 170..1430 100 <- Minus
2L 6379110..6379278 1..169 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:04:21 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6377767..6379027 170..1430 100 <- Minus
2L 6379110..6379278 1..169 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:15:30 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6377767..6379027 170..1430 100 <- Minus
arm_2L 6379110..6379278 1..169 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:53:53 Download gff for IP05285.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6377767..6379027 170..1430 100 <- Minus
2L 6379110..6379278 1..169 100   Minus

IP05285.hyp Sequence

Translation from 0 to 356

> IP05285.hyp
SSPPTTQPPPTTTTLRRTTTTAAEIALDGYINTPLNGNGIGIVGEGPTNS
VIASGKSSIKYLSNLNEIDKSKQKLTGSSPKGFDWSKGKSSGSHGNLMAS
SWPLICCILALLTTHSCG*

IP05285.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:34:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG42368-PA 467 CG42368-PA 350..467 1..118 621 100 Plus

IP05285.pep Sequence

Translation from 1461 to 2228

> IP05285.pep
MIKNAVSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKELGD
KVVFVPVDVTSEKDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKN
VAHRLEDFQRVININTVGTFNVIRLSAGLMGANEPNQDGQRGVIVNTASV
AAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPML
AALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENPLLNGEVIRIDGA
LRMMP*

IP05285.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:46:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19368-PA 255 GF19368-PA 1..255 1..255 1291 95.7 Plus
Dana\GF22468-PA 249 GF22468-PA 10..248 6..251 308 35.2 Plus
Dana\GF16339-PA 257 GF16339-PA 5..229 3..234 195 29 Plus
Dana\GF16338-PA 257 GF16338-PA 5..229 3..234 191 27.3 Plus
Dana\GF18656-PA 256 GF18656-PA 7..253 6..254 191 28.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:46:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG19147-PA 255 GG19147-PA 1..255 1..255 1327 99.6 Plus
Dere\GG18643-PA 249 GG18643-PA 10..249 6..252 276 34.3 Plus
Dere\GG12728-PA 251 GG12728-PA 3..243 2..249 202 30 Plus
Dere\GG12970-PA 257 GG12970-PA 5..229 3..234 197 29.4 Plus
Dere\GG13462-PA 261 GG13462-PA 6..197 3..207 182 30.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:46:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24783-PA 255 GH24783-PA 1..255 1..255 1246 91.8 Plus
Dgri\GH12482-PA 248 GH12482-PA 5..248 1..252 290 32.9 Plus
Dgri\GH15599-PA 261 GH15599-PA 6..247 3..255 184 31 Plus
Dgri\GH22984-PA 257 GH22984-PA 5..254 3..254 183 27 Plus
Dgri\GH15276-PA 325 GH15276-PA 81..321 6..251 174 26.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:14
Subject Length Description Subject Range Query Range Score Percent Strand
scu-PA 255 CG7113-PA 1..255 1..255 1268 100 Plus
scu-PB 126 CG7113-PB 1..126 130..255 636 100 Plus
CG3603-PB 249 CG3603-PB 5..249 1..252 302 33.2 Plus
CG3603-PA 249 CG3603-PA 5..249 1..252 302 33.2 Plus
CG12171-PA 257 CG12171-PA 5..229 3..234 225 29.8 Plus
CG3699-PA 251 CG3699-PA 3..243 2..249 219 30.5 Plus
Pdh-PD 260 CG4899-PD 6..196 3..207 210 31 Plus
Pdh-PB 277 CG4899-PB 23..213 3..207 210 31 Plus
CG31549-PB 257 CG31549-PB 5..229 3..234 208 28.6 Plus
CG31549-PA 257 CG31549-PA 5..229 3..234 208 28.6 Plus
Pdh-PC 261 CG4899-PC 6..197 3..207 198 30.8 Plus
Pdh-PA 278 CG4899-PA 23..214 3..207 198 30.8 Plus
CG10672-PA 317 CG10672-PA 73..313 6..251 195 26.9 Plus
CG31548-PA 256 CG31548-PA 7..253 6..254 183 28.4 Plus
CG31546-PA 264 CG31546-PA 15..261 6..254 178 27.4 Plus
CG10425-PA 336 CG10425-PA 39..225 8..198 170 31.2 Plus
CG18814-PB 267 CG18814-PB 6..196 3..206 158 28.3 Plus
CG15629-PA 325 CG15629-PA 54..258 2..211 148 24.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:46:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14682-PA 255 GI14682-PA 1..255 1..255 1290 96.5 Plus
Dmoj\GI11166-PA 249 GI11166-PA 5..249 1..252 266 33.2 Plus
Dmoj\GI10241-PA 257 GI10241-PA 5..192 3..199 182 29.9 Plus
Dmoj\GI14997-PA 255 GI14997-PA 3..188 2..197 182 29.9 Plus
Dmoj\GI22521-PA 256 GI22521-PA 7..186 6..194 179 30.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:46:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14944-PA 255 GL14944-PA 1..255 1..255 1305 97.3 Plus
Dper\GL19942-PA 295 GL19942-PA 5..163 1..167 188 37.9 Plus
Dper\GL14417-PA 255 GL14417-PA 3..247 2..249 186 28.5 Plus
Dper\GL24511-PA 257 GL24511-PA 5..254 3..254 182 26.2 Plus
Dper\GL23021-PA 256 GL23021-PA 7..253 6..254 179 25.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:46:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20113-PA 255 GA20113-PA 1..255 1..255 1305 97.3 Plus
Dpse\GA17551-PB 242 GA17551-PB 5..226 1..231 299 36.5 Plus
Dpse\GA17622-PA 255 GA17622-PA 3..247 2..249 186 28.5 Plus
Dpse\GA11451-PA 257 GA11451-PA 5..254 3..254 185 26.6 Plus
Dpse\GA16317-PA 256 GA16317-PA 7..253 6..254 178 25.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:46:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22877-PA 255 GM22877-PA 1..255 1..255 1325 99.6 Plus
Dsec\GM19262-PA 249 GM19262-PA 10..249 6..252 270 33.9 Plus
Dsec\GM19006-PA 251 GM19006-PA 3..243 2..249 202 30.5 Plus
Dsec\GM10826-PA 257 GM10826-PA 5..229 3..234 199 29.8 Plus
Dsec\GM10825-PA 257 GM10825-PA 5..229 3..234 183 27.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:46:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD17383-PA 195 GD17383-PA 3..195 63..255 1021 100 Plus
Dsim\GD16628-PA 249 GD16628-PA 10..249 6..252 271 33.9 Plus
Dsim\GD16445-PA 251 GD16445-PA 3..243 2..249 202 30.5 Plus
Dsim\GD19803-PA 257 GD19803-PA 5..229 3..234 200 29.8 Plus
Dsim\GD12481-PA 261 GD12481-PA 6..197 3..207 183 31.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:46:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16589-PA 255 GJ16589-PA 1..255 1..255 1296 96.1 Plus
Dvir\GJ15296-PA 249 GJ15296-PA 5..249 1..252 294 33.2 Plus
Dvir\GJ11045-PA 257 GJ11045-PA 5..192 3..199 198 30.8 Plus
Dvir\GJ12626-PA 261 GJ12626-PA 6..197 3..207 184 32.7 Plus
Dvir\GJ10124-PA 255 GJ10124-PA 7..227 6..234 177 28.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:46:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25326-PA 255 GK25326-PA 1..255 1..255 1293 95.7 Plus
Dwil\GK25534-PA 248 GK25534-PA 10..248 6..252 291 33.2 Plus
Dwil\GK13928-PA 257 GK13928-PA 5..229 3..234 199 28.2 Plus
Dwil\GK10169-PA 255 GK10169-PA 7..194 6..203 195 32.7 Plus
Dwil\GK13927-PA 257 GK13927-PA 5..229 3..234 192 27.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:46:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17707-PA 255 GE17707-PA 1..255 1..255 1327 99.6 Plus
Dyak\GE16292-PA 249 GE16292-PA 10..249 6..252 276 34.3 Plus
Dyak\GE16554-PA 251 GE16554-PA 3..243 2..249 204 30.8 Plus
Dyak\Pdh-PA 261 GE22908-PA 6..197 3..207 184 30.8 Plus
Dyak\GE10147-PA 257 GE10147-PA 5..229 3..234 181 28.6 Plus