Clone IP05335 Report

Search the DGRC for IP05335

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:53
Well:35
Vector:pOT2
Associated Gene/TranscriptCG42254-RB
Protein status:IP05335.pep: wuzgold
Preliminary Size:306
Sequenced Size:653

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12854 2005-01-01 Successful iPCR screen
CG12854 2008-04-29 Release 5.5 accounting

Clone Sequence Records

IP05335.complete Sequence

653 bp (653 high quality bases) assembled on 2006-01-26

GenBank Submission: BT024394

> IP05335.complete
TAGAATCTTTTTATTTAAATGGGTAAAGTTTCGATGGCTTTCCTACAGCC
AGGACAATATCAAGGCCCAATTGAACGCCGGAGTCCGGCAATTCAACAAG
AAGCGCAGTCGCGGCAAAGTCTGGAATGTCTTCTCCAGAATCGAGCTTGG
TCAAATAACATGGATGCACTTCACACATGGAGCGGCACAAGTGCTACAGA
ACCTATGTCATATATCCAACATCAGAGGATGAAGAGGATTCCCACTGGAA
TCCGGACGTTTCCAGTGCGGACAAGGCTACAGATAAGATAACCGAGGCCC
TGATGGATTGGTGCGTCGTGGTTAGTGCGCGGGACATCGAAACGCACTAC
GATTTCTTCTTGGTCTTTGTCGCCTTGGACAGCCAGGAGGATAAGATTAT
CAAAGAAATTCAAGGCTACCAGGCAATACAGATGCCTGCATGTGGATTAG
CTGCACCGAAAGATGTTGCCCAACCAATATGAATAAAAGAATCGATTCTT
AGCTCTAGCTTACCAAATTGTAGGTTTTCCTAGAATTCCTGTTAATTTAA
AACTATTAATGATCCACAATGTCGATACACAAAAAAATTTGAAAAATTAA
AATTTTGAATAAAGAAAACAATACGAAAAAAAAAAAAAAAAAAAAAAAAA
AAA

IP05335.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:19:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG42254-RB 1253 CG42254-RB 629..1253 1..625 3125 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:48:14
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 10656895..10657519 625..1 3065 99.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:45:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14769597..14770223 627..1 3135 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 14770796..14771422 627..1 3135 100 Minus
Blast to na_te.dros performed on 2019-03-16 03:48:13 has no hits.

IP05335.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:48:53 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 10656895..10657519 1..625 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:26:40 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
CG42254-RB 1..306 177..482 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:33:56 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
CG42254-RB 1..306 177..482 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:04:17 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
CG42254-RB 1..306 177..482 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:08:11 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
CG42254-RB 1..306 177..482 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:05:22 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
CG42254-RB 629..1253 1..625 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:33:56 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
CG42254-RB 629..1253 1..625 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:04:17 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
CG42254-RB 607..1231 1..625 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:08:11 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
CG42254-RB 629..1253 1..625 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:53 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14769599..14770223 1..625 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:53 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14769599..14770223 1..625 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:53 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14769599..14770223 1..625 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:04:17 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10657104..10657728 1..625 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:58:15 Download gff for IP05335.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14770798..14771422 1..625 100   Minus

IP05335.hyp Sequence

Translation from 176 to 481

> IP05335.hyp
MERHKCYRTYVIYPTSEDEEDSHWNPDVSSADKATDKITEALMDWCVVVS
ARDIETHYDFFLVFVALDSQEDKIIKEIQGYQAIQMPACGLAAPKDVAQP
I*
Sequence IP05335.hyp has no blast hits.

IP05335.pep Sequence

Translation from 176 to 481

> IP05335.pep
MERHKCYRTYVIYPTSEDEEDSHWNPDVSSADKATDKITEALMDWCVVVS
ARDIETHYDFFLVFVALDSQEDKIIKEIQGYQAIQMPACGLAAPKDVAQP
I*

IP05335.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:13:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22398-PA 252 GG22398-PA 1..49 1..46 134 55.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:13:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12287-PA 604 GE12287-PA 71..125 1..47 170 60 Plus
Dyak\GE12287-PA 604 GE12287-PA 490..528 48..86 140 74.4 Plus