IP05335.complete Sequence
653 bp (653 high quality bases) assembled on 2006-01-26
GenBank Submission: BT024394
> IP05335.complete
TAGAATCTTTTTATTTAAATGGGTAAAGTTTCGATGGCTTTCCTACAGCC
AGGACAATATCAAGGCCCAATTGAACGCCGGAGTCCGGCAATTCAACAAG
AAGCGCAGTCGCGGCAAAGTCTGGAATGTCTTCTCCAGAATCGAGCTTGG
TCAAATAACATGGATGCACTTCACACATGGAGCGGCACAAGTGCTACAGA
ACCTATGTCATATATCCAACATCAGAGGATGAAGAGGATTCCCACTGGAA
TCCGGACGTTTCCAGTGCGGACAAGGCTACAGATAAGATAACCGAGGCCC
TGATGGATTGGTGCGTCGTGGTTAGTGCGCGGGACATCGAAACGCACTAC
GATTTCTTCTTGGTCTTTGTCGCCTTGGACAGCCAGGAGGATAAGATTAT
CAAAGAAATTCAAGGCTACCAGGCAATACAGATGCCTGCATGTGGATTAG
CTGCACCGAAAGATGTTGCCCAACCAATATGAATAAAAGAATCGATTCTT
AGCTCTAGCTTACCAAATTGTAGGTTTTCCTAGAATTCCTGTTAATTTAA
AACTATTAATGATCCACAATGTCGATACACAAAAAAATTTGAAAAATTAA
AATTTTGAATAAAGAAAACAATACGAAAAAAAAAAAAAAAAAAAAAAAAA
AAA
IP05335.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:19:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42254-RB | 1253 | CG42254-RB | 629..1253 | 1..625 | 3125 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:48:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 10656895..10657519 | 625..1 | 3065 | 99.4 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:45:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14769597..14770223 | 627..1 | 3135 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:12:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 14770796..14771422 | 627..1 | 3135 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 03:48:13 has no hits.
IP05335.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:48:53 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 10656895..10657519 | 1..625 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:26:40 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42254-RB | 1..306 | 177..482 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:33:56 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42254-RB | 1..306 | 177..482 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:04:17 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42254-RB | 1..306 | 177..482 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:08:11 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42254-RB | 1..306 | 177..482 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:05:22 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42254-RB | 629..1253 | 1..625 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:33:56 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42254-RB | 629..1253 | 1..625 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:04:17 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42254-RB | 607..1231 | 1..625 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:08:11 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42254-RB | 629..1253 | 1..625 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:53 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14769599..14770223 | 1..625 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:53 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14769599..14770223 | 1..625 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:48:53 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14769599..14770223 | 1..625 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:04:17 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10657104..10657728 | 1..625 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:58:15 Download gff for
IP05335.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14770798..14771422 | 1..625 | 100 | | Minus |
IP05335.hyp Sequence
Translation from 176 to 481
> IP05335.hyp
MERHKCYRTYVIYPTSEDEEDSHWNPDVSSADKATDKITEALMDWCVVVS
ARDIETHYDFFLVFVALDSQEDKIIKEIQGYQAIQMPACGLAAPKDVAQP
I*
Sequence IP05335.hyp has no blast hits.
IP05335.pep Sequence
Translation from 176 to 481
> IP05335.pep
MERHKCYRTYVIYPTSEDEEDSHWNPDVSSADKATDKITEALMDWCVVVS
ARDIETHYDFFLVFVALDSQEDKIIKEIQGYQAIQMPACGLAAPKDVAQP
I*
IP05335.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:13:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22398-PA | 252 | GG22398-PA | 1..49 | 1..46 | 134 | 55.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:13:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE12287-PA | 604 | GE12287-PA | 71..125 | 1..47 | 170 | 60 | Plus |
Dyak\GE12287-PA | 604 | GE12287-PA | 490..528 | 48..86 | 140 | 74.4 | Plus |