BDGP Sequence Production Resources |
Search the DGRC for IP05392
Library: | IP |
Tissue Source: | Pooled D melanogaster cDNA libraries |
Created by: | |
Date Registered: | 2004-07-08 |
Comments: | |
Original Plate Number: | 53 |
Well: | 92 |
Vector: | pOT2 |
Associated Gene/Transcript | pallidin-RD |
Protein status: | IP05392.pep: wuzgold |
Preliminary Size: | 363 |
Sequenced Size: | 1025 |
1025 bp assembled on 2011-03-15
GenBank Submission: BT126148.1
> IP05392.complete CTTAACAATCAGCTGCTTTTGTTTTTTAATCTCTTATTGGTTTGTTTATT GGTTTTATTTGATATTATGTTGAAGAGCAGCAATATAAATAGTGTCCTCA ACGAACTCCCTAATGACCCAGCAAGGGATTCCACCGCCCAATCTTCTCAC AATGGAAAACCAAAACAAGATGCGGAAACCTGTTGCTCCTCCCAGGACAA CGAAGTCATGGCCAGTCTAGCCGCTTTACAGTTGTCCGCTGGCGTCCTGC AAATAGCGGAGCCTCCACTAAACCATGTGCGCACCCAGCTTAGGGAATTG ATGTAAGCACTGTGGTTCGGATTTTAAAAATCACTTCACGGACTGCAAGT CTCATTTCAGCGGTAGGCAGAACAAAACATACATCGATTTGTCCAAGGAG AAATATAAACTGGACTGCAGCAGTGGCCAGGCTGAATGATATGATGAGCG ATGTAAAGCGATACAAAGATAAGCTAACAAAAATCAAGAAGGAAATGCAG GGCGTCTATCAGCGCACCAAAGAGTTAAAGAAACGAGCCGCTAACGTGGC GGCCTGCAAGCAGCGTGACTACCAGCGGAAACTCGAGAGGCTACAGCACG AGGAGTCGCTCATTGGCAGCCAGTAGACGAAGGGGATCAGTCAACACCTA ACCAGGTGTCTCCCGGAATCTTCAAGCTACCTGTACCACCTCGTTAAAGC GCATTTACATTGGGATTTCCGTTTACAACTAGCCAATATTGTAACAGATA ACAGTTGAACAAAAGTTAAACCATTTGAATACATAATAATAATAATTATA ATAATAACTGTATACGTTATAAGACCAGGCTATCGTATGTCTGCGATTAG TTGGAAAACATTACATTGTATATTGTGTATAGTTAAGTAAGCACTTAAGA GATTTCACAGAAAAAAAAAGATAAATGCGTCCAATGAGTAAAGGAAGCAA ATTACTACTATACATTTAGCTGCAAATATTATTTATAAATATACAAATAT TTATGTTTAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11680519..11681002 | 1008..525 | 2405 | 99.8 | Minus |
chr3L | 24539361 | chr3L | 11681789..11682144 | 443..90 | 1715 | 99.4 | Minus |
chr3L | 24539361 | chr3L | 11682200..11682291 | 92..1 | 460 | 100 | Minus |
chr3L | 24539361 | chr3L | 11681114..11681201 | 530..443 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11689629..11690114 | 1010..525 | 2415 | 99.8 | Minus |
3L | 28110227 | 3L | 11690897..11691252 | 443..90 | 1715 | 99.4 | Minus |
3L | 28110227 | 3L | 11691308..11691399 | 92..1 | 460 | 100 | Minus |
3L | 28110227 | 3L | 11690226..11690313 | 530..443 | 440 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11682729..11683214 | 1010..525 | 2415 | 99.7 | Minus |
3L | 28103327 | 3L | 11683997..11684352 | 443..90 | 1725 | 99.4 | Minus |
3L | 28103327 | 3L | 11684408..11684499 | 92..1 | 460 | 100 | Minus |
3L | 28103327 | 3L | 11683326..11683413 | 530..443 | 440 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11680556..11680996 | 531..971 | 94 | <- | Minus |
chr3L | 11681114..11681200 | 444..530 | 100 | <- | Minus |
chr3L | 11681789..11682141 | 93..443 | 99 | <- | Minus |
chr3L | 11682200..11682291 | 1..92 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pallidin-RC | 1..90 | 208..297 | 100 | == | Plus |
pallidin-RC | 91..363 | 356..626 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pallidin-RB | 1..231 | 67..297 | 100 | == | Plus |
pallidin-RB | 232..504 | 356..626 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pallidin-RB | 1..231 | 67..297 | 100 | == | Plus |
Pallidin-RB | 232..504 | 356..626 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pallidin-RD | 1..1010 | 1..1008 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
pallidin-RD | 1..1010 | 1..1008 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Pallidin-RB | 1..297 | 1..297 | 100 | == | Plus |
Pallidin-RB | 298..952 | 356..1008 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11689631..11690108 | 531..1008 | 100 | <- | Minus |
3L | 11690226..11690312 | 444..530 | 100 | <- | Minus |
3L | 11690897..11691249 | 93..443 | 99 | <- | Minus |
3L | 11691308..11691399 | 1..92 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11689631..11690108 | 531..1008 | 100 | <- | Minus |
3L | 11690226..11690312 | 444..530 | 100 | <- | Minus |
3L | 11690897..11691249 | 93..443 | 99 | <- | Minus |
3L | 11691308..11691399 | 1..92 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11689631..11690108 | 531..1008 | 100 | <- | Minus |
3L | 11690226..11690312 | 444..530 | 100 | <- | Minus |
3L | 11690897..11691249 | 93..443 | 99 | <- | Minus |
3L | 11691308..11691399 | 1..92 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11682731..11683208 | 531..1008 | 100 | <- | Minus |
arm_3L | 11683326..11683412 | 444..530 | 100 | <- | Minus |
arm_3L | 11683997..11684349 | 93..443 | 99 | <- | Minus |
arm_3L | 11684408..11684499 | 1..92 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11682731..11683208 | 531..1008 | 100 | <- | Minus |
3L | 11683326..11683412 | 444..530 | 100 | <- | Minus |
3L | 11683997..11684349 | 93..443 | 99 | <- | Minus |
3L | 11684408..11684499 | 1..92 | 100 | Minus |
Translation from 0 to 305
> IP05392.pep LNNQLLLFFNLLLVCLLVLFDIMLKSSNINSVLNELPNDPARDSTAQSSH NGKPKQDAETCCSSQDNEVMASLAALQLSAGVLQIAEPPLNHVRTQLREL M*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24525-PA | 169 | GF24525-PA | 1..81 | 23..101 | 211 | 56.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13899-PA | 120 | GG13899-PA | 1..32 | 70..101 | 152 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16625-PA | 161 | GH16625-PA | 1..71 | 23..101 | 146 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pldn-PB | 167 | CG14133-PB | 1..79 | 23..101 | 394 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16344-PA | 173 | GL16344-PA | 1..82 | 23..101 | 178 | 52.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA12783-PA | 173 | GA12783-PA | 1..82 | 23..101 | 177 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24723-PA | 120 | GM24723-PA | 1..32 | 70..101 | 155 | 93.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12785-PA | 120 | GD12785-PA | 1..32 | 70..101 | 159 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11261-PA | 161 | GJ11261-PA | 1..71 | 23..101 | 140 | 45.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20189-PA | 167 | GE20189-PA | 1..79 | 23..101 | 368 | 89.9 | Plus |
Translation from 0 to 305
> IP05392.hyp LNNQLLLFFNLLLVCLLVLFDIMLKSSNINSVLNELPNDPARDSTAQSSH NGKPKQDAETCCSSQDNEVMASLAALQLSAGVLQIAEPPLNHVRTQLREL M*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Pallidin-PB | 167 | CG14133-PB | 1..79 | 23..101 | 394 | 98.7 | Plus |