Clone IP05394 Report

Search the DGRC for IP05394

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:53
Well:94
Vector:pOT2
Associated Gene/TranscriptIlp3-RA
Protein status:IP05394.pep: gold
Preliminary Size:381
Sequenced Size:762

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG14167 2005-01-01 Successful iPCR screen
Ilp3 2008-04-29 Release 5.5 accounting
Ilp3 2008-08-15 Release 5.9 accounting
Ilp3 2008-12-18 5.12 accounting

Clone Sequence Records

IP05394.complete Sequence

762 bp (762 high quality bases) assembled on 2005-03-09

GenBank Submission: BT022394

> IP05394.complete
ACACATACTACACACTCCCCGGGGGATTCACGCATCCATACTTAAACACC
ACTTCATCACTCATGGGCATCGAGATGAGGTGTCAGGACAGGAGGATCCT
GCTACCTAGCCTACTCCTACTAATCCTTATGATCGGCGGTGTCCAGGCCA
CCATGAAGTTGTGCGGCCGCAAACTGCCCGAAACTCTCTCCAAGCTCTGT
GTGTATGGCTTCAACGCAATGACCAAGAGAACTTTGGACCCCGTGAACTT
CAATCAGATCGATGGCTTCGAAGACCGTTCCCTGCTGGAAAGACTGTTGA
GTGATAGTTCGGTTCAGATGCTCAAGACTCGACGTCTTCGGGATGGAGTC
TTCGACGAGTGTTGCCTGAAGTCGTGCACCATGGATGAGGTGCTGAGATA
TTGTGCTGCCAAGCCGAGAACGTAAACCTCGTAAACCTATTAACCCAATG
ACGACAACTGCGATGATTGAAATGGAATGAAAGGACCCGATTGGGGAAAG
CACTCACGTAATCATAGTTGTTAAGTCGTTATCGAAGCCTACTCAATTCC
AACTTTGGATTTATGATATATATGCACATGTAAGAGGGATGTATGCGCAT
AATTTATGATCTGAAATCAGAGACAGGCACGCGAAATGAATCGGAACACG
GGATGTTATGCATGGTAGATATGTATGATTGTGCGGGGCCAGAATACATC
GCCTGGGTATAAATTATTAAATAAATTATGTATTCAAACTGCAAAAAAAA
AAAAAAAAAAAA

IP05394.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:46:51
Subject Length Description Subject Range Query Range Score Percent Strand
Ilp3.a 1278 Ilp3.a 453..1194 1..742 3710 100 Plus
Ilp3-RA 1004 Ilp3-RA 179..920 1..742 3710 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:53:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9793058..9793563 742..237 2470 99.2 Minus
chr3L 24539361 chr3L 9793635..9793871 237..1 1185 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:45:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9801298..9801803 742..237 2530 100 Minus
3L 28110227 3L 9801875..9802111 237..1 1185 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:36:27
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 9794398..9794903 742..237 2530 100 Minus
3L 28103327 3L 9794975..9795211 237..1 1185 100 Minus
Blast to na_te.dros performed on 2019-03-15 17:53:49 has no hits.

IP05394.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:54:59 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9793098..9793562 238..702 99 <- Minus
chr3L 9793635..9793871 1..237 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:26:48 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 1..363 63..425 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:16:21 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 1..363 63..425 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:49:35 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 1..363 63..425 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:00:45 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 1..363 63..425 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:49:36 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 1..363 63..425 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:15:29 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 10..751 1..742 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:16:21 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 10..751 1..742 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:49:35 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 10..751 1..742 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:00:45 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 10..751 1..742 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:49:36 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
Ilp3-RA 10..751 1..742 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:54:59 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9801298..9801802 238..742 100 <- Minus
3L 9801875..9802111 1..237 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:54:59 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9801298..9801802 238..742 100 <- Minus
3L 9801875..9802111 1..237 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:54:59 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9801298..9801802 238..742 100 <- Minus
3L 9801875..9802111 1..237 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:49:35 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9794398..9794902 238..742 100 <- Minus
arm_3L 9794975..9795211 1..237 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:36:23 Download gff for IP05394.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9794398..9794902 238..742 100 <- Minus
3L 9794975..9795211 1..237 100   Minus

IP05394.hyp Sequence

Translation from 2 to 424

> IP05394.hyp
TYYTLPGGFTHPYLNTTSSLMGIEMRCQDRRILLPSLLLLILMIGGVQAT
MKLCGRKLPETLSKLCVYGFNAMTKRTLDPVNFNQIDGFEDRSLLERLLS
DSSVQMLKTRRLRDGVFDECCLKSCTMDEVLRYCAAKPRT*

IP05394.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:35:24
Subject Length Description Subject Range Query Range Score Percent Strand
Ilp3-PA 120 CG14167-PA 1..120 21..140 620 100 Plus

IP05394.pep Sequence

Translation from 2 to 424

> IP05394.pep
TYYTLPGGFTHPYLNTTSSLMGIEMRCQDRRILLPSLLLLILMIGGVQAT
MKLCGRKLPETLSKLCVYGFNAMTKRTLDPVNFNQIDGFEDRSLLERLLS
DSSVQMLKTRRLRDGVFDECCLKSCTMDEVLRYCAAKPRT*

IP05394.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 16:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25126-PA 118 GF25126-PA 3..118 26..139 298 53.4 Plus
Dana\GF25125-PA 123 GF25125-PA 5..123 31..135 133 36.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:15:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14006-PA 121 GG14006-PA 1..121 21..140 491 92.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 16:15:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16017-PA 127 GH16017-PA 11..125 33..138 168 33.6 Plus
Dgri\GH15431-PA 156 GH15431-PA 47..154 48..134 146 34.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:25:06
Subject Length Description Subject Range Query Range Score Percent Strand
Ilp3-PA 120 CG14167-PA 1..120 21..140 620 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 16:15:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12281-PA 123 GI12281-PA 22..122 47..134 158 40.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 16:15:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16326-PA 130 GL16326-PA 27..125 49..138 246 49.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 16:15:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23862-PA 130 GA23862-PA 27..125 49..138 246 49.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:15:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24840-PA 123 GM24840-PA 1..120 21..140 598 97.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 16:15:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12892-PA 120 GD12892-PA 1..120 21..140 604 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 16:15:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13218-PA 135 GJ13218-PA 1..134 21..140 189 38.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 16:15:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19146-PA 123 GK19146-PA 25..121 47..134 188 42.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:15:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20301-PA 116 GE20301-PA 1..116 25..140 490 93.1 Plus