IP05539.complete Sequence
674 bp (674 high quality bases) assembled on 2006-01-26
GenBank Submission: BT024383
> IP05539.complete
TCCAAAAAAAAAAACGTTAAGCATAATTCCCCAAATTTCGAGCTCACGCG
AACGTGAACCACTGCCAGGATGTGCATGCCGTATTTGAGTAAGCTCTTCG
GTGGAGGCGATCGCCGGCAGCGTCGCACCCGCGATGGAGGCGTCACCCCA
CTGCCCAGCCTGGCCAATGTGACCCAGGTCTCCATGGACACCGTCAAGTC
CGCCAAGTCAGCGAAGTCAGCGAAGTCGGCTAAATCCGGCAAGTCCGCCG
GTCGCCGTAGTACCACCGCTGCCAATCCTCCTGAGTCCAGTGTCAGCAGC
AATGAGGATAATGCGGAGCAACCTCTGGCGACCGCCTCCCGAGGAGCTGT
GCGCAACGCCACCGCCTCGATGGCCACCAGTGCTGCTCCAGCCGACGAGG
CGAGGTCGCGCCGCTCCTGGTGGGGATACTTTGGCATGAGCAAGAACAAG
AAGTCCAGCATTGAGTCGCTCTAGACTGCCAAGGATCGGGATTGCAGCGA
ATTGCAATGCATATATTCAATAGGAGTTGATGGTCATCGAAATTTGGCTT
GCAGTAGTCCCCTATACACTTATCAAAAATCTTTTGCTTTTTTCGCTTTC
AAGATATTAGTTAAATAAAAATGTTCCATTTCGAACCTTTGGAACACCAA
AAAAAAAAAAAAAAAAAAAAAAAA
IP05539.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:16:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-RA | 647 | CG13010-RA | 3..647 | 4..648 | 3225 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:32:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 16567947..16568591 | 648..4 | 3210 | 99.8 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:45:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:32:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 16678261..16678909 | 652..4 | 3245 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:10:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 16686359..16687007 | 652..4 | 3245 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 09:32:09 has no hits.
IP05539.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:32:51 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 16567947..16568595 | 1..648 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:27:23 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 70..474 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:28:28 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 70..474 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:41:43 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 70..474 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:52:22 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 70..474 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:13:14 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 70..474 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:59:37 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 70..474 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:28:27 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 70..474 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:41:43 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 33..681 | 1..648 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:52:23 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 1..405 | 70..474 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:13:14 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13010-RA | 33..681 | 1..648 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:32:51 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16678265..16678913 | 1..648 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:32:51 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16678265..16678913 | 1..648 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:32:51 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16678265..16678913 | 1..648 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:41:43 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16572298..16572946 | 1..648 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:54:43 Download gff for
IP05539.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 16686363..16687011 | 1..648 | 99 | | Minus |
IP05539.pep Sequence
Translation from 69 to 473
> IP05539.pep
MCMPYLSKLFGGGDRRQRRTRDGGVTPLPSLANVTQVSMDTVKSAKSAKS
AKSAKSGKSAGRRSTTAANPPESSVSSNEDNAEQPLATASRGAVRNATAS
MATSAAPADEARSRRSWWGYFGMSKNKKSSIESL*
IP05539.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:47:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18236-PA | 134 | GG18236-PA | 1..134 | 1..134 | 448 | 76.1 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:21:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-PA | 134 | CG13010-PA | 1..134 | 1..134 | 672 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:47:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM13378-PA | 134 | GM13378-PA | 1..134 | 1..134 | 667 | 98.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:47:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD15735-PA | 134 | GD15735-PA | 1..134 | 1..134 | 663 | 97.8 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:47:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15654-PA | 135 | GE15654-PA | 1..135 | 1..134 | 594 | 87.4 | Plus |
IP05539.hyp Sequence
Translation from 69 to 473
> IP05539.hyp
MCMPYLSKLFGGGDRRQRRTRDGGVTPLPSLANVTQVSMDTVKSAKSAKS
AKSAKSGKSAGRRSTTAANPPESSVSSNEDNAEQPLATASRGAVRNATAS
MATSAAPADEARSRRSWWGYFGMSKNKKSSIESL*
IP05539.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:36:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13010-PA | 134 | CG13010-PA | 1..134 | 1..134 | 672 | 100 | Plus |