IP05608.complete Sequence
747 bp (747 high quality bases) assembled on 2005-01-11
GenBank Submission: BT023642
> IP05608.complete
AACGACACCTCTGCCAAGTAGCTTCGTAAAAAATTTGTCAAAGCCGGGGT
AAATCGAAAACAAAAACGTAGAAACGTGGTGCGAAGTAAAAATTGCAATC
GCAGACAAAAGCGCACACGGTACGCAAAAGTTTGCATTTCAAGAGTCAAT
TTCCCTGCTGAGTTTGCTGCATAAGTTCGAGATTGTGAAAATGGTCAAGC
ATCTGGACAATGGACTTGTGTTCTACCGACTGATGCTGAGCTTTCCGCTA
AGAATTGCACTGTATGCGGTGTACGTTTACCTGGAGAATTTGCTGGGGCT
GATGCTTTTGATCCAGGAAGTTCTGGTCCTTCAATTTCTATTCCTCTGCA
TGGTCATCCGGTGGGTATACCCACCGTGGCCAGCAAATGGTATCGCTTCA
TCGCTGAGGTTTCGCACACGGAAAGCCCTCCAGATCTTCCTGACCATCTG
GATCGTATTGCTCAACACGACCACCTATACGTGGAGCATCCCATGCCAGG
GCATCATGCAACTCAGCCGACTATTCCGGATATGCGCCTATAGTCGCACC
TGGATCATGATACAGCGCCACAATGGCGCCCGACGCTGAAAAATTATCCT
GCGAGAGCAATAAACGTTCGCAAGTGCATGAAATTTAATGCTCGGTTGGT
GGACTCAAATCCGCATTGCTCTGCGCGGTATTTGGAGTAAAGCAGGGTAT
AAGTGGTTAATAAAAATTGAACTAAAAATAAAAAAAAAAAAAAAAAA
IP05608.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:46:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-RA | 723 | CG14370-RA | 1..723 | 1..723 | 3615 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:10:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3R | 27901430 | chr3R | 9412932..9413660 | 1..729 | 3600 | 99.6 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:46:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:10:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13587997..13588726 | 1..730 | 3650 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:35:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 31820162 | 3R | 13328828..13329557 | 1..730 | 3650 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-16 15:10:05 has no hits.
IP05608.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:10:53 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3R | 9412932..9413660 | 1..729 | 99 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:27:32 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..399 | 191..589 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:15:23 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..399 | 191..589 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:05:27 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..399 | 191..589 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:59:53 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..399 | 191..589 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:37:15 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..399 | 191..589 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:13:37 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..399 | 191..589 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:15:23 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..729 | 1..729 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:05:27 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..729 | 1..729 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:59:53 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..399 | 191..589 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:37:15 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14370-RA | 1..729 | 1..729 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:10:53 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13587997..13588725 | 1..729 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:10:53 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13587997..13588725 | 1..729 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:10:53 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13587997..13588725 | 1..729 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:05:27 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9413719..9414447 | 1..729 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:35:22 Download gff for
IP05608.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13328828..13329556 | 1..729 | 100 | | Plus |
IP05608.hyp Sequence
Translation from 190 to 588
> IP05608.hyp
MVKHLDNGLVFYRLMLSFPLRIALYAVYVYLENLLGLMLLIQEVLVLQFL
FLCMVIRWVYPPWPANGIASSLRFRTRKALQIFLTIWIVLLNTTTYTWSI
PCQGIMQLSRLFRICAYSRTWIMIQRHNGARR*
IP05608.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:37:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-PA | 132 | CG14370-PA | 1..132 | 1..132 | 693 | 100 | Plus |
IP05608.pep Sequence
Translation from 190 to 588
> IP05608.pep
MVKHLDNGLVFYRLMLSFPLRIALYAVYVYLENLLGLMLLIQEVLVLQFL
FLCMVIRWVYPPWPANGIASSLRFRTRKALQIFLTIWIVLLNTTTYTWSI
PCQGIMQLSRLFRICAYSRTWIMIQRHNGARR*
IP05608.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 16:08:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG19747-PA | 133 | GG19747-PA | 1..133 | 1..132 | 422 | 64.7 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14370-PA | 132 | CG14370-PA | 1..132 | 1..132 | 693 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 16:08:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM24114-PA | 133 | GM24114-PA | 1..133 | 1..132 | 496 | 78.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 16:08:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE26280-PA | 133 | GE26280-PA | 1..133 | 1..132 | 439 | 67.7 | Plus |