IP06116.complete Sequence
339 bp (339 high quality bases) assembled on 2005-03-09
GenBank Submission: BT022489
> IP06116.complete
TCCAAGCGAGTTCCATTTCTTTTCACCATTATCCTGTTTCTGGCTGGACT
GGGTCAGCACACAACTGAAAGTGTACTTCCAGACTGCGTTCTTTATCCAA
GATGTTTGATCACAAAGGATCCGTGTTGCATGTAAAGCATCTATAGAAAT
CAAAGAAGGATCTTGTATATGGAAGTGGAAATGTGGTTCAAAATATCAGC
ACTTCTCAAGGCTGTAACAAAAACTGCACTCTGTTTTTATAAATACAAAT
ATCCACAAATATCTGGTCTTAACATGGCAACATTTCAAGTCTTCCAATAA
ATCATTTTCGTTTTTATTGTGAAAAAAAAAAAAAAAAAA
IP06116.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 17:03:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6555-RA | 341 | CG6555-RA | 20..341 | 1..322 | 1610 | 100 | Plus |
CG15841-RA | 341 | CG15841-RA | 20..341 | 1..322 | 1610 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:41:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2L | 23010047 | chr2L | 11590098..11590418 | 321..1 | 1605 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:47:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:41:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11591338..11591659 | 322..1 | 1610 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:58:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 11591338..11591659 | 322..1 | 1610 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-16 17:41:28 has no hits.
IP06116.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:42:43 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2L | 11590098..11590418 | 1..321 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:29:03 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6555-RA | 10..144 | 1..135 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:02:01 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6555-RA | 10..144 | 1..135 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:59:32 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6555-RA | 10..144 | 1..135 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 15:02:06 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6555-RA | 10..144 | 1..135 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:04:14 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp33A-RA | 10..144 | 1..135 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:27:17 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15841-RA | 20..340 | 1..321 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:02:01 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6555-RA | 20..340 | 1..321 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:59:32 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15841-RA | 20..340 | 1..321 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 15:02:06 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15841-RA | 20..340 | 1..321 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:04:14 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Acp33A-RA | 20..340 | 1..321 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:42:43 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11591339..11591659 | 1..321 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:42:43 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11591339..11591659 | 1..321 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:42:43 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11591339..11591659 | 1..321 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:59:32 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 11591339..11591659 | 1..321 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:36:48 Download gff for
IP06116.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 11591339..11591659 | 1..321 | 100 | | Minus |
IP06116.hyp Sequence
Translation from 0 to 134
> IP06116.hyp
SKRVPFLFTIILFLAGLGQHTTESVLPDCVLYPRCLITKDPCCM*
IP06116.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:41:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Acp33A-PA | 47 | CG6555-PA | 4..47 | 1..44 | 240 | 100 | Plus |
IP06116.pep Sequence
Translation from 168 to 299
> IP06116.pep
MEVEMWFKISALLKAVTKTALCFYKYKYPQISGLNMATFQVFQ*
Sequence IP06116.pep has no blast hits.