Clone IP06242 Report

Search the DGRC for IP06242

Clone and Library Details

Library:IP
Tissue Source:Pooled D melanogaster cDNA libraries
Created by: 
Date Registered:2004-07-08
Comments: 
Original Plate Number:62
Well:42
Vector:pOT2
Associated Gene/TranscriptCG5157-RA
Protein status:IP06242.pep: gold
Preliminary Size:360
Sequenced Size:1410

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5157 2005-01-01 Successful iPCR screen
CG5157 2008-04-29 Release 5.5 accounting
CG5157 2008-08-15 Release 5.9 accounting
CG5157 2008-12-18 5.12 accounting

Clone Sequence Records

IP06242.complete Sequence

1410 bp (1410 high quality bases) assembled on 2005-12-20

GenBank Submission: BT024379

> IP06242.complete
TCTCATATAAAACGCAAAAGCATTAAAAGCAAAAAACAAAAATGGGAAAA
ATGAAAGCAAATTTAAAATATATTTCCAAAATATATAGAACATAACTATG
AAAACATAAAAACCGTTTTTTCTTTAAGCAAGCAAATTTGTTGTCAACTG
GAAACTTATGGCTTTGATTGGCACTTGACACACATTATTGCATTTTGGGT
TTGACTGATTGTACGATATGAACCCTGCATTGTTCAAGTTATCAATAAAT
GGTGTCGAAGTTAATGGACATAACTAACTCAAAGAAAATTCCCACCATAA
ATTACTCAACGGGAAGTGTTCAAGTGAATCATAAACTGTGCTTAGATTTC
ACCAACGATAGAAACCCACTCAATGACAACTCGCGCCATCCATTTGCATT
AATGATTTGCACAAATCCCACCCAAAAAAAAGGAGATTGGTCACTGCCCA
CACTAGTATTAGGTCGCCTTGAAAGACGGTGAAATTCTCACGTATTCCTT
ATCAGCCACAATGCAGACAGATTGTGGAAATAACTGAAATAAAACAGCAA
ATAGTAATTGCCCGTCGAGGGGGAAATGGGGGAGAACAGGTACAAGGCAA
GTACAAGCGATCTAGGCGATTGTTTGAACTATTGATAAATGTTAAACATA
AGCAAGGGTCGCCCCTTGGCACGCGTCCAGTGTTTCCGAGTCCGTCCAAC
GGTTAACAGCTCCTAAAATTATCGAATCAAGAGCGCGACTTATTAAACGC
AAATTAACAGCAGCCATTAAAAGACATTCGCGAACAGCGGAAAGCAATTA
GGAAATCAAATCAGCAATATGTCACAGTTGTACGAACTCTCGGAGGTGGC
CCAGCAGAACGGCAAGAATGGCAAACCCTGCTGGCTGATCATCAAGGGGA
ACGTGTACGATGTAACCAAGTTCCTCGGCGAGCATCCTGGCGGCAGTGAA
GCACTACTCGAATATGGCGGCAAGGATGCCACCAAGGCCTTCAAGCAGGC
AGGCCATTCCTCCGACGCAGAAAAGGATCTAAAGAACTACAAAATCGGAG
AAATCAACTCAGCTGCACCCATTCAAGTGCAGCCAACGTCCAATGGTGCA
GCAAAGCCGACGGCAAACACAATATCCGAAGATCCCGAACCCGCGAAGAA
TAGCTCCTCCGGTTTCTGTTGCTGCTAGTCATAGGTTTACATGTCATTTG
ATTGATTTATTAACATAGGATGAGGTCGTAGTTAGTTTATCATAGTTAAA
TTGTAAATAGTTCTAGGTTTATCTCATAATAGCTACATCTTCATGTCCAC
AAAGCTATCTTAAAAAAGATCAACTCTTCTTAAACGATCTGAATAAATTG
CAAACAAAGCCGGCGGAGCTGCTCCACCAATTTCAAAAAAATTAAAAAAA
AAAAAAAAAA

IP06242.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG5157-RA 1396 CG5157-RA 1..1396 1..1396 6770 99.2 Plus
CG16838-RD 4033 CG16838-RD 3778..4033 1396..1141 1280 100 Minus
CG16838-RC 4269 CG16838-RC 4014..4269 1396..1141 1280 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 12:40:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 16126255..16127647 1393..1 6735 99.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 17:48:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 12:40:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16136484..16137879 1396..1 6750 99.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 16129584..16130979 1396..1 6770 99.2 Minus
Blast to na_te.dros performed 2019-03-16 12:40:09
Subject Length Description Subject Range Query Range Score Percent Strand
accord2 7650 accord2 QBERT 7650bp 611..715 114..10 128 60.4 Minus

IP06242.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 12:40:53 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 16126255..16127647 1..1393 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 17:29:11 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..360 819..1178 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 15:40:18 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..360 819..1178 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 15:09:50 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..360 819..1178 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:15:57 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..360 819..1178 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:50:55 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..360 819..1178 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 18:12:59 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..1393 1..1393 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 15:40:17 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..1393 1..1393 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 15:09:50 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..1393 1..1393 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:15:57 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..360 819..1178 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:50:55 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
CG5157-RA 1..1393 1..1393 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:40:53 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16136487..16137879 1..1393 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:40:53 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16136487..16137879 1..1393 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 12:40:53 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16136487..16137879 1..1393 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 15:09:50 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16129587..16130979 1..1393 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:02:50 Download gff for IP06242.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16129587..16130979 1..1393 99   Minus

IP06242.pep Sequence

Translation from 818 to 1177

> IP06242.pep
MSQLYELSEVAQQNGKNGKPCWLIIKGNVYDVTKFLGEHPGGSEALLEYG
GKDATKAFKQAGHSSDAEKDLKNYKIGEINSAAPIQVQPTSNGAAKPTAN
TISEDPEPAKNSSSGFCCC*

IP06242.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:28:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10319-PA 119 GF10319-PA 1..119 1..119 471 75.2 Plus
Dana\GF13182-PA 134 GF13182-PA 6..110 2..112 224 43.2 Plus
Dana\GF15091-PA 138 GF15091-PA 47..138 7..104 207 41.8 Plus
Dana\GF20301-PA 117 GF20301-PA 1..80 1..82 202 51.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:28:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13493-PA 119 GG13493-PA 1..119 1..119 559 89.9 Plus
Dere\GG23285-PA 134 GG23285-PA 6..113 2..118 220 39.3 Plus
Dere\GG17685-PA 117 GG17685-PA 1..89 1..91 199 45.1 Plus
Dere\GG21732-PA 137 GG21732-PA 46..116 7..79 191 45.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20101-PA 134 GH20101-PA 9..107 5..112 208 39.8 Plus
Dgri\GH10148-PA 140 GH10148-PA 49..125 7..85 193 43 Plus
Dgri\GH24801-PA 118 GH24801-PA 1..86 1..89 191 40.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:20:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG5157-PA 119 CG5157-PA 1..119 1..119 633 100 Plus
Cyt-b5-PB 134 CG2140-PB 6..110 2..112 216 42.3 Plus
CG3566-PD 106 CG3566-PD 1..99 1..97 201 45.1 Plus
CG3566-PB 117 CG3566-PB 1..89 1..91 192 45.1 Plus
CG3566-PC 89 CG3566-PC 1..80 1..82 191 47.6 Plus
CG6870-PB 137 CG6870-PB 46..116 7..79 177 45.2 Plus
CG6870-PA 137 CG6870-PA 46..116 7..79 177 45.2 Plus
Cyt-b5-PA 123 CG2140-PA 30..99 39..112 139 41.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:28:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12677-PA 121 GI12677-PA 1..120 1..119 316 52.8 Plus
Dmoj\GI18997-PA 135 GI18997-PA 9..110 5..112 220 44.4 Plus
Dmoj\GI22344-PA 139 GI22344-PA 48..118 7..79 187 43.8 Plus
Dmoj\GI21528-PA 117 GI21528-PA 1..80 1..82 169 39 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:28:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18032-PA 132 GL18032-PA 1..132 1..119 421 64.4 Plus
Dper\GL20014-PA 135 GL20014-PA 9..107 5..109 213 42.9 Plus
Dper\GL15857-PA 138 GL15857-PA 46..116 7..79 185 43.8 Plus
Dper\GL21352-PA 118 GL21352-PA 1..80 1..82 176 40.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:28:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18697-PA 132 GA18697-PA 1..132 1..119 421 64.4 Plus
Dpse\GA15264-PA 135 GA15264-PA 9..107 5..109 213 42.9 Plus
Dpse\GA19919-PA 138 GA19919-PA 46..116 7..79 185 43.8 Plus
Dpse\GA17524-PA 118 GA17524-PA 1..80 1..82 170 39 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:28:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24442-PA 119 GM24442-PA 1..119 1..119 545 86.6 Plus
Dsec\GM20961-PA 134 GM20961-PA 6..113 2..118 219 39.3 Plus
Dsec\GM17113-PA 137 GM17113-PA 46..116 7..79 190 45.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:28:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12511-PA 119 GD12511-PA 1..119 1..119 597 95 Plus
Dsim\GD10488-PA 134 GD10488-PA 6..113 2..118 219 39.3 Plus
Dsim\GD21856-PA 136 GD21856-PA 46..115 7..79 174 45.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:28:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12661-PA 120 GJ12661-PA 1..120 1..119 324 54 Plus
Dvir\GJ19962-PA 135 GJ19962-PA 9..110 5..112 222 43.5 Plus
Dvir\GJ16001-PA 117 GJ16001-PA 1..88 1..90 176 40 Plus
Dvir\GJ20242-PA 104 GJ20242-PA 25..83 21..79 175 45.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:28:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11351-PA 124 GK11351-PA 1..124 1..119 443 72 Plus
Dwil\GK10686-PA 133 GK10686-PA 9..110 5..112 224 43.5 Plus
Dwil\GK18221-PA 140 GK18221-PA 48..118 7..79 205 45.2 Plus
Dwil\GK19965-PA 118 GK19965-PA 8..78 7..79 172 45.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:28:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22584-PA 119 GE22584-PA 1..119 1..119 590 95 Plus
Dyak\GE19131-PA 134 GE19131-PA 6..113 2..118 219 39.3 Plus
Dyak\GE16473-PA 117 GE16473-PA 1..89 1..91 196 44 Plus
Dyak\GE13120-PA 137 GE13120-PA 46..116 7..79 190 45.2 Plus

IP06242.hyp Sequence

Translation from 818 to 1177

> IP06242.hyp
MSQLYELSEVAQQNGKNGKPCWLIIKGNVYDVTKFLGEHPGGSEALLEYG
GKDATKAFKQAGHSSDAEKDLKNYKIGEINSAAPIQVQPTSNGAAKPTAN
TISEDPEPAKNSSSGFCCC*

IP06242.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 12:41:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG5157-PA 119 CG5157-PA 1..119 1..119 633 100 Plus
Cyt-b5-PB 134 CG2140-PB 6..110 2..112 216 42.3 Plus
CG3566-PD 106 CG3566-PD 1..99 1..97 201 45.1 Plus
CG3566-PB 117 CG3566-PB 1..89 1..91 192 45.1 Plus
CG3566-PC 89 CG3566-PC 1..80 1..82 191 47.6 Plus